Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220905336

Identifier: 220905336

GI number: 220905336

Start: 2496252

End: 2497727

Strand: Direct

Name: 220905336

Synonym: Ddes_2074

Alternate gene names: NA

Gene position: 2496252-2497727 (Clockwise)

Preceding gene: 220905329

Following gene: 220905337

Centisome position: 86.87

GC content: 65.38

Gene sequence:

>1476_bases
ATGCATGCCGCTCAGCCAATCTGTATTTTATGGGATTCGTCTCACATCTGGGGCCTCATGGCCTGGCGCGCCGTGCGCGC
CATGGGACTGCCCTGCCGCCTGGTTAAGGGAAAAGAGATAGCTCAAGGCGCTCTTTTAGGCAAGCCGCACGGCGGCAATG
CCCCTGACACTACGCAACCGCCCGCTCATACGGAAAAACAGCCGTCCGGGCGCGCCTCCCTGCTGCTGGTTCCCGGCGGC
AACGCGCGCCTCAAGGCCGCCGGTCTGGGCGACGACGGCATACGGGCCGTGCGCCGCTGGATGGAAGAAGGCGGCAACTA
TCTGGGGTTCTGCGGCGGAGCAGGGCTGGCCCTGAGTCATGCAGCGCCGCAGCAGGGCCTGGGCATCTGCCCCTGGGGGC
GGGCCACCTATCCAGAAAGGCTGCACCATCTTATTTCAGGCCATGCACGGGTGCGCGTCTGCGATAACGGCGAATTTTCC
TTCCGCCCACCACCACGCCCCAACAGCGTCTCCCCCAAAAAACAGCAGGCCGCAGCGGCCCCGGCAGCCAGAACCTGCCC
CGGCGCGGGAAAAGCTGCGGGCAGGGTTTCCGCTCGCTGTCTGCCCCTGTCCGCCGGAACGGAGCGCCCCCCAAGCCTGC
CCGTGTGGTGGCCCGGGCGCTTTGCTGCCGAAGACAACAGTGGTGTGCATGTGCTGGCCTCCTATGATGCGCCCGATGCC
GACTTCTGGCTGGCCGACCTGCCGCTGCAAAGCATACCGCCGCATATTTTCGGGCAGTGGCAGGAGCTTTACGGCGTGAA
CCTTCTGCCCGACTTTCTCAAGGGCCAGCCTCTCGTGGTCAGCGGCCGCCATGGCCGGGGAAACTATGTACTGAGCTATT
CACATCTTGAAACACCGCACAGTCCCGATGCCAACGCATGGCTGGCCCAGCTGCTGCACCAGCTTACCGGCCTTGAGCCG
GACAGGGCGGGCGTACCCCTGTGGCAACTGCGCCACCCATGCCATGCCTGGCCCGAAGACAGCGCCCCCCTGCTGGACGC
CCTGCGCCACATGCGCGACCTGCTGGATCTTGCCGTGGAGCACCATCTTTTTTTTGCACGCACCCACTGGCTGTGGGGCT
GGCGCACGGGCCTGCCCGGCGCGGCGTGCAACAACCTGCATGCGGCCCTGTGCACGGCGGCCAGCCTCGAACCTTCTGCG
ACGGCCCTGGCCTACTGGCGCGTAGTGCGCCCACGTTTCAGCGATCTGGCAGACCGCTTCGCCGCCGGGGCCGAAGGGTA
TTTTCTGGCCTGCCGCCTGGCCGAAACCCTTTCGCCCAGCCTGCCGGACGCCGTGAACAGGCGCGGACTGGACTGTCAGC
GGCAGGCGCTTTTCGGCCATCCCATGAGCGGCGGCGGCCTTATGGAAGAACTGCTGGATATTACGGAAGAACTGGTTTTT
CTTTCGCAGGATTCGACTCCCTGCGACTTGCGGTAA

Upstream 100 bases:

>100_bases
TGCTTGCGCCACCGGGCTTCCACGTCATGGGGCTCGTAGCCCTTGGGTAGGGTATCCGCCATCTTGCATTCTCCGTAAAA
GGCGGCAATAGTGCAGCATT

Downstream 100 bases:

>100_bases
CAGGACAGCCCGCGTAAACAAAACGAAAAACAGCAGAAACAACATGCTTGGATTCGATCTGGGCCGCACAGGCTATGAAG
ACGCCTTTACCCTGCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MHAAQPICILWDSSHIWGLMAWRAVRAMGLPCRLVKGKEIAQGALLGKPHGGNAPDTTQPPAHTEKQPSGRASLLLVPGG
NARLKAAGLGDDGIRAVRRWMEEGGNYLGFCGGAGLALSHAAPQQGLGICPWGRATYPERLHHLISGHARVRVCDNGEFS
FRPPPRPNSVSPKKQQAAAAPAARTCPGAGKAAGRVSARCLPLSAGTERPPSLPVWWPGRFAAEDNSGVHVLASYDAPDA
DFWLADLPLQSIPPHIFGQWQELYGVNLLPDFLKGQPLVVSGRHGRGNYVLSYSHLETPHSPDANAWLAQLLHQLTGLEP
DRAGVPLWQLRHPCHAWPEDSAPLLDALRHMRDLLDLAVEHHLFFARTHWLWGWRTGLPGAACNNLHAALCTAASLEPSA
TALAYWRVVRPRFSDLADRFAAGAEGYFLACRLAETLSPSLPDAVNRRGLDCQRQALFGHPMSGGGLMEELLDITEELVF
LSQDSTPCDLR

Sequences:

>Translated_491_residues
MHAAQPICILWDSSHIWGLMAWRAVRAMGLPCRLVKGKEIAQGALLGKPHGGNAPDTTQPPAHTEKQPSGRASLLLVPGG
NARLKAAGLGDDGIRAVRRWMEEGGNYLGFCGGAGLALSHAAPQQGLGICPWGRATYPERLHHLISGHARVRVCDNGEFS
FRPPPRPNSVSPKKQQAAAAPAARTCPGAGKAAGRVSARCLPLSAGTERPPSLPVWWPGRFAAEDNSGVHVLASYDAPDA
DFWLADLPLQSIPPHIFGQWQELYGVNLLPDFLKGQPLVVSGRHGRGNYVLSYSHLETPHSPDANAWLAQLLHQLTGLEP
DRAGVPLWQLRHPCHAWPEDSAPLLDALRHMRDLLDLAVEHHLFFARTHWLWGWRTGLPGAACNNLHAALCTAASLEPSA
TALAYWRVVRPRFSDLADRFAAGAEGYFLACRLAETLSPSLPDAVNRRGLDCQRQALFGHPMSGGGLMEELLDITEELVF
LSQDSTPCDLR
>Mature_491_residues
MHAAQPICILWDSSHIWGLMAWRAVRAMGLPCRLVKGKEIAQGALLGKPHGGNAPDTTQPPAHTEKQPSGRASLLLVPGG
NARLKAAGLGDDGIRAVRRWMEEGGNYLGFCGGAGLALSHAAPQQGLGICPWGRATYPERLHHLISGHARVRVCDNGEFS
FRPPPRPNSVSPKKQQAAAAPAARTCPGAGKAAGRVSARCLPLSAGTERPPSLPVWWPGRFAAEDNSGVHVLASYDAPDA
DFWLADLPLQSIPPHIFGQWQELYGVNLLPDFLKGQPLVVSGRHGRGNYVLSYSHLETPHSPDANAWLAQLLHQLTGLEP
DRAGVPLWQLRHPCHAWPEDSAPLLDALRHMRDLLDLAVEHHLFFARTHWLWGWRTGLPGAACNNLHAALCTAASLEPSA
TALAYWRVVRPRFSDLADRFAAGAEGYFLACRLAETLSPSLPDAVNRRGLDCQRQALFGHPMSGGGLMEELLDITEELVF
LSQDSTPCDLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53239; Mature: 53239

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAAQPICILWDSSHIWGLMAWRAVRAMGLPCRLVKGKEIAQGALLGKPHGGNAPDTTQP
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCHHHCCCEECCCCCCCCCCCCCC
PAHTEKQPSGRASLLLVPGGNARLKAAGLGDDGIRAVRRWMEEGGNYLGFCGGAGLALSH
CCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEECCC
AAPQQGLGICPWGRATYPERLHHLISGHARVRVCDNGEFSFRPPPRPNSVSPKKQQAAAA
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC
PAARTCPGAGKAAGRVSARCLPLSAGTERPPSLPVWWPGRFAAEDNSGVHVLASYDAPDA
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCC
DFWLADLPLQSIPPHIFGQWQELYGVNLLPDFLKGQPLVVSGRHGRGNYVLSYSHLETPH
CEEEECCCHHHCCCHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCEEEEECCCCCCC
SPDANAWLAQLLHQLTGLEPDRAGVPLWQLRHPCHAWPEDSAPLLDALRHMRDLLDLAVE
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HHLFFARTHWLWGWRTGLPGAACNNLHAALCTAASLEPSATALAYWRVVRPRFSDLADRF
HHHHEEEHHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAGAEGYFLACRLAETLSPSLPDAVNRRGLDCQRQALFGHPMSGGGLMEELLDITEELVF
HCCCCCEEEEEEHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHEE
LSQDSTPCDLR
EECCCCCCCCC
>Mature Secondary Structure
MHAAQPICILWDSSHIWGLMAWRAVRAMGLPCRLVKGKEIAQGALLGKPHGGNAPDTTQP
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCHHHCCCEECCCCCCCCCCCCCC
PAHTEKQPSGRASLLLVPGGNARLKAAGLGDDGIRAVRRWMEEGGNYLGFCGGAGLALSH
CCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEECCC
AAPQQGLGICPWGRATYPERLHHLISGHARVRVCDNGEFSFRPPPRPNSVSPKKQQAAAA
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC
PAARTCPGAGKAAGRVSARCLPLSAGTERPPSLPVWWPGRFAAEDNSGVHVLASYDAPDA
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCC
DFWLADLPLQSIPPHIFGQWQELYGVNLLPDFLKGQPLVVSGRHGRGNYVLSYSHLETPH
CEEEECCCHHHCCCHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCEEEEECCCCCCC
SPDANAWLAQLLHQLTGLEPDRAGVPLWQLRHPCHAWPEDSAPLLDALRHMRDLLDLAVE
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HHLFFARTHWLWGWRTGLPGAACNNLHAALCTAASLEPSATALAYWRVVRPRFSDLADRF
HHHHEEEHHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAGAEGYFLACRLAETLSPSLPDAVNRRGLDCQRQALFGHPMSGGGLMEELLDITEELVF
HCCCCCEEEEEEHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHEE
LSQDSTPCDLR
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA