Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905250

Identifier: 220905250

GI number: 220905250

Start: 2394076

End: 2395206

Strand: Direct

Name: 220905250

Synonym: Ddes_1988

Alternate gene names: NA

Gene position: 2394076-2395206 (Clockwise)

Preceding gene: 220905248

Following gene: 220905251

Centisome position: 83.32

GC content: 60.65

Gene sequence:

>1131_bases
ATGCGACAGAAATTTTCCGTACTGCTGCCCCTCTGCCTCGGCATTTTGCTGCTCTCCTTTTCCAACGCCCGAGCCGACTT
TTATCAGGTGGGTTTTCGCACACTTGGGCAATGGGATGCCGAAAACGGCCTGCGGCTGGACGTGAACCTCTGGTATCCTT
CGGTGCGCCCCCCGCGCGACATCCAGTACGGCCCCTGGGAAATTTCAGCCGCCCGTGGGGGCAAGCCCGTGGAAGGGCGC
TTTCCGCTCATTCTGCTCTCACACGATACGGCGGGATCGCGCTTTTCCTATCACGACACTGCCGCATGGCTGGCAGCCTG
CGGCTTTGTAGTGGCGGCTCCCACGCATCCCGGCGACAATATGGACAACATGGATCTGCTCCTGACCTGGGAACAGCTGG
AAAGCAGGGTACGGGAGCTTTCGGGCCTTATCACCTTTTTGCTGAACGATGTGGAAGCCGAGCCTACCATCGACCATGAG
CGCATCGGCGTTCTGGGCTTTGGCGCAGGCGGCACGGCAGCGCTTCTTCTGGGCGGCGCACTCCCCGGCTGCGAAGGCTG
GAAAGACTACTGCGCGCAAGCAGGCCGGCACGACATGTATTGCAATATCTGGGCGCAGAACCGCATGGACGGACTCTGCC
GCAGCCTGCCCCTGACAAAAAGCCCTGCCGATACGCGCATCAAAGCAGTGGCGGCAGTGGCTCCCGGTTTCGGCATGCTC
TTCGGGCGGGATTCATTCCGCTGGTTTTACCCCCCCCTGCTGCTTGTGGCCGCTTCAGGCGACAGCCTGAACAAAACCGC
TCTGCATGCCCGCAAGATTTATGAATGCACAGGCAAAAAAGCCCGCTGGCTGGTTCTGGATAAGGCCGATGCCGGCGCGC
TCATGGCCCCCTGCCCTCCCGCCCTGGCCGAAGAGCTGCCGGAACTCTGCCACTCAGTGAACGAAAAAGACAGAGAAGCC
GTACACAAAAGCATGTTCGCCGCATTGAGCGACTTTTTTCTGCACTATCTTGGCAGTGGTAAAAACCTGCCCCGCATTCC
CGCCCCGCCGGACCTTAGCCCGCCCTTGCCGCCCAAACAGGAAAGCGCCCCGGCGCCAGCACAACCGGTAAAACGCAAAC
GGTCGCAGTAA

Upstream 100 bases:

>100_bases
ACCATATCCATACGTTCATATGCTCCCGGCCCGTATCGTGGCGGCATGAACCCGCCCGAACGCCCTTGTACCCCAAGCCC
GCTTGTGGCACAACACAGGC

Downstream 100 bases:

>100_bases
TACGCTTTTTTCGCGACAAGCGATGTTCATACGGCCCATATCCTTGACAATTGTGCCGCCCCTTACTAAAGCTCTTTAAA
GTGTGCTCGTTTTGGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Dienelactone Hydrolase-Like; Lipoprotein; Acyl Transferase Hydrolase; Lipoprotein Signal Peptide; Dienelactone Hydrolase-Like Protein

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRDIQYGPWEISAARGGKPVEGR
FPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDNMDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHE
RIGVLGFGAGGTAALLLGGALPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML
FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPPALAEELPELCHSVNEKDREA
VHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQESAPAPAQPVKRKRSQ

Sequences:

>Translated_376_residues
MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRDIQYGPWEISAARGGKPVEGR
FPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDNMDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHE
RIGVLGFGAGGTAALLLGGALPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML
FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPPALAEELPELCHSVNEKDREA
VHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQESAPAPAQPVKRKRSQ
>Mature_376_residues
MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRDIQYGPWEISAARGGKPVEGR
FPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDNMDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHE
RIGVLGFGAGGTAALLLGGALPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML
FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPPALAEELPELCHSVNEKDREA
VHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQESAPAPAQPVKRKRSQ

Specific function: Unknown

COG id: COG4188

COG function: function code R; Predicted dienelactone hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41232; Mature: 41232

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRD
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
IQYGPWEISAARGGKPVEGRFPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDN
CCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCC
MDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHERIGVLGFGAGGTAALLLGGA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCC
LPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML
CCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE
FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPP
ECCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCH
ALAEELPELCHSVNEKDREAVHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ESAPAPAQPVKRKRSQ
CCCCCCCHHHHHHCCC
>Mature Secondary Structure
MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRD
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
IQYGPWEISAARGGKPVEGRFPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDN
CCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCC
MDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHERIGVLGFGAGGTAALLLGGA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCC
LPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML
CCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE
FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPP
ECCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCH
ALAEELPELCHSVNEKDREAVHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ESAPAPAQPVKRKRSQ
CCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA