| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905250
Identifier: 220905250
GI number: 220905250
Start: 2394076
End: 2395206
Strand: Direct
Name: 220905250
Synonym: Ddes_1988
Alternate gene names: NA
Gene position: 2394076-2395206 (Clockwise)
Preceding gene: 220905248
Following gene: 220905251
Centisome position: 83.32
GC content: 60.65
Gene sequence:
>1131_bases ATGCGACAGAAATTTTCCGTACTGCTGCCCCTCTGCCTCGGCATTTTGCTGCTCTCCTTTTCCAACGCCCGAGCCGACTT TTATCAGGTGGGTTTTCGCACACTTGGGCAATGGGATGCCGAAAACGGCCTGCGGCTGGACGTGAACCTCTGGTATCCTT CGGTGCGCCCCCCGCGCGACATCCAGTACGGCCCCTGGGAAATTTCAGCCGCCCGTGGGGGCAAGCCCGTGGAAGGGCGC TTTCCGCTCATTCTGCTCTCACACGATACGGCGGGATCGCGCTTTTCCTATCACGACACTGCCGCATGGCTGGCAGCCTG CGGCTTTGTAGTGGCGGCTCCCACGCATCCCGGCGACAATATGGACAACATGGATCTGCTCCTGACCTGGGAACAGCTGG AAAGCAGGGTACGGGAGCTTTCGGGCCTTATCACCTTTTTGCTGAACGATGTGGAAGCCGAGCCTACCATCGACCATGAG CGCATCGGCGTTCTGGGCTTTGGCGCAGGCGGCACGGCAGCGCTTCTTCTGGGCGGCGCACTCCCCGGCTGCGAAGGCTG GAAAGACTACTGCGCGCAAGCAGGCCGGCACGACATGTATTGCAATATCTGGGCGCAGAACCGCATGGACGGACTCTGCC GCAGCCTGCCCCTGACAAAAAGCCCTGCCGATACGCGCATCAAAGCAGTGGCGGCAGTGGCTCCCGGTTTCGGCATGCTC TTCGGGCGGGATTCATTCCGCTGGTTTTACCCCCCCCTGCTGCTTGTGGCCGCTTCAGGCGACAGCCTGAACAAAACCGC TCTGCATGCCCGCAAGATTTATGAATGCACAGGCAAAAAAGCCCGCTGGCTGGTTCTGGATAAGGCCGATGCCGGCGCGC TCATGGCCCCCTGCCCTCCCGCCCTGGCCGAAGAGCTGCCGGAACTCTGCCACTCAGTGAACGAAAAAGACAGAGAAGCC GTACACAAAAGCATGTTCGCCGCATTGAGCGACTTTTTTCTGCACTATCTTGGCAGTGGTAAAAACCTGCCCCGCATTCC CGCCCCGCCGGACCTTAGCCCGCCCTTGCCGCCCAAACAGGAAAGCGCCCCGGCGCCAGCACAACCGGTAAAACGCAAAC GGTCGCAGTAA
Upstream 100 bases:
>100_bases ACCATATCCATACGTTCATATGCTCCCGGCCCGTATCGTGGCGGCATGAACCCGCCCGAACGCCCTTGTACCCCAAGCCC GCTTGTGGCACAACACAGGC
Downstream 100 bases:
>100_bases TACGCTTTTTTCGCGACAAGCGATGTTCATACGGCCCATATCCTTGACAATTGTGCCGCCCCTTACTAAAGCTCTTTAAA GTGTGCTCGTTTTGGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Dienelactone Hydrolase-Like; Lipoprotein; Acyl Transferase Hydrolase; Lipoprotein Signal Peptide; Dienelactone Hydrolase-Like Protein
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRDIQYGPWEISAARGGKPVEGR FPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDNMDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHE RIGVLGFGAGGTAALLLGGALPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPPALAEELPELCHSVNEKDREA VHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQESAPAPAQPVKRKRSQ
Sequences:
>Translated_376_residues MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRDIQYGPWEISAARGGKPVEGR FPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDNMDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHE RIGVLGFGAGGTAALLLGGALPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPPALAEELPELCHSVNEKDREA VHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQESAPAPAQPVKRKRSQ >Mature_376_residues MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRDIQYGPWEISAARGGKPVEGR FPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDNMDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHE RIGVLGFGAGGTAALLLGGALPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPPALAEELPELCHSVNEKDREA VHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQESAPAPAQPVKRKRSQ
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41232; Mature: 41232
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRD CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC IQYGPWEISAARGGKPVEGRFPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDN CCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCC MDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHERIGVLGFGAGGTAALLLGGA CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCC LPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML CCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPP ECCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCH ALAEELPELCHSVNEKDREAVHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ESAPAPAQPVKRKRSQ CCCCCCCHHHHHHCCC >Mature Secondary Structure MRQKFSVLLPLCLGILLLSFSNARADFYQVGFRTLGQWDAENGLRLDVNLWYPSVRPPRD CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC IQYGPWEISAARGGKPVEGRFPLILLSHDTAGSRFSYHDTAAWLAACGFVVAAPTHPGDN CCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCC MDNMDLLLTWEQLESRVRELSGLITFLLNDVEAEPTIDHERIGVLGFGAGGTAALLLGGA CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCC LPGCEGWKDYCAQAGRHDMYCNIWAQNRMDGLCRSLPLTKSPADTRIKAVAAVAPGFGML CCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE FGRDSFRWFYPPLLLVAASGDSLNKTALHARKIYECTGKKARWLVLDKADAGALMAPCPP ECCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCH ALAEELPELCHSVNEKDREAVHKSMFAALSDFFLHYLGSGKNLPRIPAPPDLSPPLPPKQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ESAPAPAQPVKRKRSQ CCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA