| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is aegA [H]
Identifier: 220905246
GI number: 220905246
Start: 2389134
End: 2390555
Strand: Direct
Name: aegA [H]
Synonym: Ddes_1984
Alternate gene names: 220905246
Gene position: 2389134-2390555 (Clockwise)
Preceding gene: 220905245
Following gene: 220905247
Centisome position: 83.15
GC content: 61.67
Gene sequence:
>1422_bases ATGGAAACTAAAACCCAAAAAAAGAAACCCATCGCTCCCAGGGTGGACATGCCCTGCCAGCCCGCCGAGGTGCGCCGCGC CAACTTCGATGAAGTGGCCCTGGGCTACACCAAGGAAATGGCCATTGAAGAAGCCCGGCGCTGCCTGCAGTGCAAAAAGC CCTTCTGCGTCAGCGGCTGCCCTGTGGAAGTGCCCATCCGCGACTTTATCCGTGAAGTGGCCCTGGGCAATATGGATGCG GCCTACCGCATCATCAAGAGCACCAACAGCCTGCCCGCCGTGTGCGGCCGCGTTTGCCCGCAGGAACATCAGTGCGAAGG CAAGTGCGTCCTCAAGGCCAAGGGCCAGCCTGTAGCTATCGGCCGCCTTGAGCGCTTTGTGGCCGACACCTATATAGCGA CCACAGCCTGCGAGCAGGTTACCGGAACCAACGCCTGCGCCCTGCCCAGAGGCGACCTCAAGGTGGCCTGCATCGGCTCC GGCCCCTCATCCCTCACCTGTGCGGGCGTCTGCGCCGCCGCAGGCATCAAGGTAGACGTATACGAAGCCCTGCACGAGGC CGGTGGGGTGCTCATCTATGGCATTCCGGCGTTCCGCCTGCCCAAGAACGTGGTCGCCACAGAAATTGACGGCCTGCGCC AGTCTGGTGTGGACTTTCACCTGAACGCCGTTGGCGGCCGTACCGTGGACGTGGACGAACTGCTTGAAAGCCATCATGCC GTCTTTATCGGCGTGGGTGCTGGCCTGCCCGTATTCCTGGGCGTGCCGGGAGAAAATCTTGTGGGCGTATTCTCGGCCAA TGAGTATCTTACCCGCGTAAACCTCGGCCGGGCCTACGACTTTCCCGGTCAGGACACCCCGGCCTTTCCCGGTAAAAACG TCACCGTGTTCGGCGCGGGCAACGTAGCTATGGACGCGGCGCGCACAGCCCTGCGCATGGGCGCGGAAAGCGTGCACATT GTCTACCGCCGCACCAGGGACGAAATGCCCGCCCGCCTTGAAGAAATAGAACATGCCGAAGAAGAGGGCGTACAGTTTGC CATGCTTTCCGCGCCGGTGTGCTTTAACGGCGACAGCGAAATGCGCCTCACCTCCGTTACCCTGCAAAAAATGGAACTGG GCGAACCAGACGCCTCCGGCCGCCGCCGCCCCGTTGCCATTGAAGGCGAAGTGTACGACCTGCCCACCGACCTCGCCATT GTGGCTCTGGGCACACGCTCCAATCCCATACTTCTGGAAGCCACACCCAAGCTCAAGCTGAACAAGTGGGGCTATATCGA GGCCAATGAAGAAACAGGCGAAACATCCATACCCAACGTCTTTGCCGGCGGCGACATCGTTACCGGCGCGGCCACCGTCA TCCTTGCCATGGGCGCGGGGCGCAAGGCCGGACAGGAAATCGTAAGGCGCCTGCTGAAGTAG
Upstream 100 bases:
>100_bases GACGGGCATGAAGTGGACTTTCCCGAACTGCGCCGCCGCCTGGCTGCCTACCGCGAACAGGAAAAGGTCTCCATCGCCGA TTATCAGCTGAGGATTGCTC
Downstream 100 bases:
>100_bases CCCGAGACACTGCGCTCAAACATCCGCGGGGGAGAAAGCTTCCACTGTCTGCGCGCGCCTCCGGGTTGCGGCAAGACAGG AAAAGGCTTTCTCCCCCGGT
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues METKTQKKKPIAPRVDMPCQPAEVRRANFDEVALGYTKEMAIEEARRCLQCKKPFCVSGCPVEVPIRDFIREVALGNMDA AYRIIKSTNSLPAVCGRVCPQEHQCEGKCVLKAKGQPVAIGRLERFVADTYIATTACEQVTGTNACALPRGDLKVACIGS GPSSLTCAGVCAAAGIKVDVYEALHEAGGVLIYGIPAFRLPKNVVATEIDGLRQSGVDFHLNAVGGRTVDVDELLESHHA VFIGVGAGLPVFLGVPGENLVGVFSANEYLTRVNLGRAYDFPGQDTPAFPGKNVTVFGAGNVAMDAARTALRMGAESVHI VYRRTRDEMPARLEEIEHAEEEGVQFAMLSAPVCFNGDSEMRLTSVTLQKMELGEPDASGRRRPVAIEGEVYDLPTDLAI VALGTRSNPILLEATPKLKLNKWGYIEANEETGETSIPNVFAGGDIVTGAATVILAMGAGRKAGQEIVRRLLK
Sequences:
>Translated_473_residues METKTQKKKPIAPRVDMPCQPAEVRRANFDEVALGYTKEMAIEEARRCLQCKKPFCVSGCPVEVPIRDFIREVALGNMDA AYRIIKSTNSLPAVCGRVCPQEHQCEGKCVLKAKGQPVAIGRLERFVADTYIATTACEQVTGTNACALPRGDLKVACIGS GPSSLTCAGVCAAAGIKVDVYEALHEAGGVLIYGIPAFRLPKNVVATEIDGLRQSGVDFHLNAVGGRTVDVDELLESHHA VFIGVGAGLPVFLGVPGENLVGVFSANEYLTRVNLGRAYDFPGQDTPAFPGKNVTVFGAGNVAMDAARTALRMGAESVHI VYRRTRDEMPARLEEIEHAEEEGVQFAMLSAPVCFNGDSEMRLTSVTLQKMELGEPDASGRRRPVAIEGEVYDLPTDLAI VALGTRSNPILLEATPKLKLNKWGYIEANEETGETSIPNVFAGGDIVTGAATVILAMGAGRKAGQEIVRRLLK >Mature_473_residues METKTQKKKPIAPRVDMPCQPAEVRRANFDEVALGYTKEMAIEEARRCLQCKKPFCVSGCPVEVPIRDFIREVALGNMDA AYRIIKSTNSLPAVCGRVCPQEHQCEGKCVLKAKGQPVAIGRLERFVADTYIATTACEQVTGTNACALPRGDLKVACIGS GPSSLTCAGVCAAAGIKVDVYEALHEAGGVLIYGIPAFRLPKNVVATEIDGLRQSGVDFHLNAVGGRTVDVDELLESHHA VFIGVGAGLPVFLGVPGENLVGVFSANEYLTRVNLGRAYDFPGQDTPAFPGKNVTVFGAGNVAMDAARTALRMGAESVHI VYRRTRDEMPARLEEIEHAEEEGVQFAMLSAPVCFNGDSEMRLTSVTLQKMELGEPDASGRRRPVAIEGEVYDLPTDLAI VALGTRSNPILLEATPKLKLNKWGYIEANEETGETSIPNVFAGGDIVTGAATVILAMGAGRKAGQEIVRRLLK
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=492, Percent_Identity=31.0975609756098, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI237757300, Length=134, Percent_Identity=35.0746268656716, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1788811, Length=456, Percent_Identity=37.5, Blast_Score=298, Evalue=4e-82, Organism=Escherichia coli, GI87082180, Length=456, Percent_Identity=38.1578947368421, Blast_Score=297, Evalue=1e-81, Organism=Escherichia coli, GI1789606, Length=464, Percent_Identity=36.2068965517241, Blast_Score=288, Evalue=4e-79, Organism=Escherichia coli, GI1788468, Length=448, Percent_Identity=32.3660714285714, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1789243, Length=462, Percent_Identity=32.034632034632, Blast_Score=174, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71984108, Length=447, Percent_Identity=33.3333333333333, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17570289, Length=458, Percent_Identity=28.82096069869, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17543860, Length=163, Percent_Identity=30.6748466257669, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320030, Length=473, Percent_Identity=28.5412262156448, Blast_Score=153, Evalue=6e-38, Organism=Drosophila melanogaster, GI24640763, Length=478, Percent_Identity=29.2887029288703, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI18858217, Length=478, Percent_Identity=29.2887029288703, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24665547, Length=479, Percent_Identity=29.2275574112735, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24665543, Length=479, Percent_Identity=29.2275574112735, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI28574881, Length=479, Percent_Identity=29.2275574112735, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24665539, Length=479, Percent_Identity=29.2275574112735, Blast_Score=159, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 50669; Mature: 50669
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKTQKKKPIAPRVDMPCQPAEVRRANFDEVALGYTKEMAIEEARRCLQCKKPFCVSGC CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC PVEVPIRDFIREVALGNMDAAYRIIKSTNSLPAVCGRVCPQEHQCEGKCVLKAKGQPVAI CEECCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEH GRLERFVADTYIATTACEQVTGTNACALPRGDLKVACIGSGPSSLTCAGVCAAAGIKVDV HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHCCCEEHH YEALHEAGGVLIYGIPAFRLPKNVVATEIDGLRQSGVDFHLNAVGGRTVDVDELLESHHA HHHHHHHCCEEEECCCCHHCCCHHHHHHHHHHHHCCCCEEEEECCCCEECHHHHHHCCCE VFIGVGAGLPVFLGVPGENLVGVFSANEYLTRVNLGRAYDFPGQDTPAFPGKNVTVFGAG EEEECCCCCEEEEECCCCCEEEEEECCCEEEEEECCCEECCCCCCCCCCCCCCEEEEECC NVAMDAARTALRMGAESVHIVYRRTRDEMPARLEEIEHAEEEGVQFAMLSAPVCFNGDSE CHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCC MRLTSVTLQKMELGEPDASGRRRPVAIEGEVYDLPTDLAIVALGTRSNPILLEATPKLKL EEEEEEEHHHHHCCCCCCCCCCCCEEECCEEEECCCCEEEEEECCCCCCEEEEECCCEEE NKWGYIEANEETGETSIPNVFAGGDIVTGAATVILAMGAGRKAGQEIVRRLLK CCCEEEECCCCCCCCCCCCEEECCCCHHHHHEEEEEECCCCHHHHHHHHHHHC >Mature Secondary Structure METKTQKKKPIAPRVDMPCQPAEVRRANFDEVALGYTKEMAIEEARRCLQCKKPFCVSGC CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC PVEVPIRDFIREVALGNMDAAYRIIKSTNSLPAVCGRVCPQEHQCEGKCVLKAKGQPVAI CEECCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEH GRLERFVADTYIATTACEQVTGTNACALPRGDLKVACIGSGPSSLTCAGVCAAAGIKVDV HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHCCCEEHH YEALHEAGGVLIYGIPAFRLPKNVVATEIDGLRQSGVDFHLNAVGGRTVDVDELLESHHA HHHHHHHCCEEEECCCCHHCCCHHHHHHHHHHHHCCCCEEEEECCCCEECHHHHHHCCCE VFIGVGAGLPVFLGVPGENLVGVFSANEYLTRVNLGRAYDFPGQDTPAFPGKNVTVFGAG EEEECCCCCEEEEECCCCCEEEEEECCCEEEEEECCCEECCCCCCCCCCCCCCEEEEECC NVAMDAARTALRMGAESVHIVYRRTRDEMPARLEEIEHAEEEGVQFAMLSAPVCFNGDSE CHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCC MRLTSVTLQKMELGEPDASGRRRPVAIEGEVYDLPTDLAIVALGTRSNPILLEATPKLKL EEEEEEEHHHHHCCCCCCCCCCCCEEECCEEEECCCCEEEEEECCCCCCEEEEECCCEEE NKWGYIEANEETGETSIPNVFAGGDIVTGAATVILAMGAGRKAGQEIVRRLLK CCCEEEECCCCCCCCCCCCEEECCCCHHHHHEEEEEECCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]