| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220905215
Identifier: 220905215
GI number: 220905215
Start: 2354690
End: 2355178
Strand: Direct
Name: 220905215
Synonym: Ddes_1953
Alternate gene names: NA
Gene position: 2354690-2355178 (Clockwise)
Preceding gene: 220905210
Following gene: 220905217
Centisome position: 81.95
GC content: 64.62
Gene sequence:
>489_bases ATGTTTTCCATAATGCTTTTCATCTTTTTGTGTTTTTTCGGCATTCTCGCCGTGCTTGTGTACATGCTGCGCGGCCAGGA ACGGCTGGTAACGCAGTTACGCGACGAGCACGCGCAGTTGCGGGTGCTGTTGCGCGCCATGGAATCCCGCCTGGACCATC TGGACGGAACCAGCCCCGCTGACGCCGGGCCGGACGCCCGCCCCCTGGCGGATCAGTCCCGCCCGCAGGCTGTACCCACA GAAAAAATTCATGGCACAGACCCGCTGGAAAATTTTTCTGGCCAGACGCGGGCCGCCAGGCTCACGCCTGCGCATGAAGG CCGCGCTGCCGATACCGCCGATGATCCGCTGCTGCACCTGAGCTTCGACCCGCCCGCAGCCCATGCCCCCGGCCGCCCCA CTGCCGGGGCTGCTGCCGTGGACCCGGCCCTTGACCTGCACTTTGACCCTCTGGATATGCCGGACATGCCGCAGGGCGCA AGGCGCTGA
Upstream 100 bases:
>100_bases TGTTGGGCAGCCATAAAAGCTCCTTGCCCCGGCGCGGGCGAACGTATATAACGGCCCTACGTGGCCGGGGATTCCCGGCC CGTACTTTTGGAGGCCTTTC
Downstream 100 bases:
>100_bases GCCTCGCCACGGCACAACATCGCAGGGCCGCAGATCCGGTGCAGCCAGACTGCGGGGTGCCTGCCCCGGCAGCAGAACAA TGCCGGCAAACACCGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MFSIMLFIFLCFFGILAVLVYMLRGQERLVTQLRDEHAQLRVLLRAMESRLDHLDGTSPADAGPDARPLADQSRPQAVPT EKIHGTDPLENFSGQTRAARLTPAHEGRAADTADDPLLHLSFDPPAAHAPGRPTAGAAAVDPALDLHFDPLDMPDMPQGA RR
Sequences:
>Translated_162_residues MFSIMLFIFLCFFGILAVLVYMLRGQERLVTQLRDEHAQLRVLLRAMESRLDHLDGTSPADAGPDARPLADQSRPQAVPT EKIHGTDPLENFSGQTRAARLTPAHEGRAADTADDPLLHLSFDPPAAHAPGRPTAGAAAVDPALDLHFDPLDMPDMPQGA RR >Mature_162_residues MFSIMLFIFLCFFGILAVLVYMLRGQERLVTQLRDEHAQLRVLLRAMESRLDHLDGTSPADAGPDARPLADQSRPQAVPT EKIHGTDPLENFSGQTRAARLTPAHEGRAADTADDPLLHLSFDPPAAHAPGRPTAGAAAVDPALDLHFDPLDMPDMPQGA RR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17665; Mature: 17665
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIMLFIFLCFFGILAVLVYMLRGQERLVTQLRDEHAQLRVLLRAMESRLDHLDGTSPA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DAGPDARPLADQSRPQAVPTEKIHGTDPLENFSGQTRAARLTPAHEGRAADTADDPLLHL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEE SFDPPAAHAPGRPTAGAAAVDPALDLHFDPLDMPDMPQGARR ECCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFSIMLFIFLCFFGILAVLVYMLRGQERLVTQLRDEHAQLRVLLRAMESRLDHLDGTSPA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DAGPDARPLADQSRPQAVPTEKIHGTDPLENFSGQTRAARLTPAHEGRAADTADDPLLHL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEE SFDPPAAHAPGRPTAGAAAVDPALDLHFDPLDMPDMPQGARR ECCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA