| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is lnt [H]
Identifier: 220905199
GI number: 220905199
Start: 2332952
End: 2334610
Strand: Direct
Name: lnt [H]
Synonym: Ddes_1937
Alternate gene names: 220905199
Gene position: 2332952-2334610 (Clockwise)
Preceding gene: 220905198
Following gene: 220905200
Centisome position: 81.19
GC content: 65.16
Gene sequence:
>1659_bases ATGACCTTTTTTCCGTCGGCTGCATCTCGGCCCGAGGGACGCATCTTGCCCGTGGCCCTTGCGGGGGCCTTGGGACTGTG GCTCGGTTTTCCCAATGACCTTGCCGGCATACCGCCCCTGGTCCTGCTGTGGCCGCTGGCCCTGGCCTGGCTGGGGCTGC ACGCCGCCACGCGCGGCGCCGCCATGCGCTACGGCTGGCTCACAAGCCTGGCCGGAAGCATAGCCGCCCTTTACTGGCTC AGTCTGCCTGTGCATAATGTGGGCGGCCTGCCCTGGCTGCTGGCTGTTCCCTGCGCCCTGCTTATTGCGGCCTGCATTTC CAGCGCAGGAGGCTTTTTTTCAGTGGCAGCGCATCTGCTGCGCCACCGTCCGCCCTGGCTATGGGCCGTGATGCTGGGGC TGTTGTGGTATGTGCTCGAAGCTGTGTACGCGCTGGTGCTGGGCTTTCCCTGGCTGGAGCTTTCGGGCGCTCTGGCGGCA TGGCCCTTGCTGGTTCAGGGGGCAGACGCCATCGGGTCCTACGCCCTCGCCGGGCTGTGGACCACCATCGCCCTGTGGTG CGGGCTTGCCTTGCTGCCGCACCCTGCACAGACCGCGCCCGCAGCGGAAAAAAACATGCGTCAAAACGGCAAGGCGGCCC ACAACTGCCGCATGCCCTGGCGGCCCGCATGCCTGGCATCAGGCCTGCTCATGGCTGCCCTGCTGCTCGGCTACGGAGCG CTGCGTATGCACCGCCAGCCGCTTACCAGCGATCCTGGCGGCCCGCAAAGTGTGCTGGCCCTGTTTGTCGAAGGCAATGT GGACCAGAACCAGAAATGGTTGCCCGCCTTCCAGCGGCGGACCGTTGACCTGTATCTGAAACTTACCTACGACGCGCTGG CGCAGAAACCTGACGAAAGGCCCCTGATCATCTGGCCGGAAACGGCCCTGCCTTTCTTTTTCGAAACCAACCAGCTGCAC TCGCCGCGGGTACGGCAACTGCCTGCGATCACGGGCTGCCCCCTGCTTTTAGGTGCGCCCGGCGTGGAACGGCTGCCGGA CAAAAAAGAACCGGCTGTCTTCAACCGCGCCTTTCTGCTCACGCCGCCCTCCGGCGAAGCAGCCGCCCACTACGACAAGG AGCATCTGGTTCCCTTTGGGGAATACCTGCCGGAATGGCTCAACTGGGGCTTTCTGGAGGCGCTGCTGCAAGGCGTGGGG GTCTACGAGACCGGCACGGCCATCGCGCCCCTGCGCTACGGCAATCTTGCCCTGGGCATGCTCATTTGCTATGAAGGTAT ATTTCCCTGGCTGGCCCAGGCGCGCGTACAGGACGGAGCCAACATTCTGGTGGACATCAGCAATGACGGCTGGTTCGGCG CGACTCCCGCAGCGCGGCAGCATCTGTACCTTACGGTTCTGCGTGCTCTTGAACAGAACCGCTGGATTCTGCGCGGCACC AATACCGGCATCTCCGTAGTGGTAGACAGCCGGGGCCGTCTGGTCATGCGCGGCGACCAGTTCAGGGAGCAGGCCATCTG GGGCCGGGCCGCCCTTGAAAGCAGGCCGAGCCTGTACCACCGCCTGTGGCCCTGGCCCCTGCCCGCAGCCACAGCGCTGC TGACCGGTCTGGTTTTATGGGGTCCCGGCGGCAGTATCCGCCGCCGCACCCGCGTCTGA
Upstream 100 bases:
>100_bases AGGCCGCAGTGCAAGCCGCCGAGGAAATCCTCCGCAGCACGCCGCCCCCGGCGGCCGAAACAGGAGATGACGCGCCCCGC CCTACGGAGTCCCCACGGGT
Downstream 100 bases:
>100_bases CACAGCTCACGCGCCTTTTCATATTTGTTATATAACGTGCAGCCGCATAGCGGCTTTTCCGGCAAAAACGCCGGGCCACC TTCAACCCACAGATCCACCA
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MTFFPSAASRPEGRILPVALAGALGLWLGFPNDLAGIPPLVLLWPLALAWLGLHAATRGAAMRYGWLTSLAGSIAALYWL SLPVHNVGGLPWLLAVPCALLIAACISSAGGFFSVAAHLLRHRPPWLWAVMLGLLWYVLEAVYALVLGFPWLELSGALAA WPLLVQGADAIGSYALAGLWTTIALWCGLALLPHPAQTAPAAEKNMRQNGKAAHNCRMPWRPACLASGLLMAALLLGYGA LRMHRQPLTSDPGGPQSVLALFVEGNVDQNQKWLPAFQRRTVDLYLKLTYDALAQKPDERPLIIWPETALPFFFETNQLH SPRVRQLPAITGCPLLLGAPGVERLPDKKEPAVFNRAFLLTPPSGEAAAHYDKEHLVPFGEYLPEWLNWGFLEALLQGVG VYETGTAIAPLRYGNLALGMLICYEGIFPWLAQARVQDGANILVDISNDGWFGATPAARQHLYLTVLRALEQNRWILRGT NTGISVVVDSRGRLVMRGDQFREQAIWGRAALESRPSLYHRLWPWPLPAATALLTGLVLWGPGGSIRRRTRV
Sequences:
>Translated_552_residues MTFFPSAASRPEGRILPVALAGALGLWLGFPNDLAGIPPLVLLWPLALAWLGLHAATRGAAMRYGWLTSLAGSIAALYWL SLPVHNVGGLPWLLAVPCALLIAACISSAGGFFSVAAHLLRHRPPWLWAVMLGLLWYVLEAVYALVLGFPWLELSGALAA WPLLVQGADAIGSYALAGLWTTIALWCGLALLPHPAQTAPAAEKNMRQNGKAAHNCRMPWRPACLASGLLMAALLLGYGA LRMHRQPLTSDPGGPQSVLALFVEGNVDQNQKWLPAFQRRTVDLYLKLTYDALAQKPDERPLIIWPETALPFFFETNQLH SPRVRQLPAITGCPLLLGAPGVERLPDKKEPAVFNRAFLLTPPSGEAAAHYDKEHLVPFGEYLPEWLNWGFLEALLQGVG VYETGTAIAPLRYGNLALGMLICYEGIFPWLAQARVQDGANILVDISNDGWFGATPAARQHLYLTVLRALEQNRWILRGT NTGISVVVDSRGRLVMRGDQFREQAIWGRAALESRPSLYHRLWPWPLPAATALLTGLVLWGPGGSIRRRTRV >Mature_551_residues TFFPSAASRPEGRILPVALAGALGLWLGFPNDLAGIPPLVLLWPLALAWLGLHAATRGAAMRYGWLTSLAGSIAALYWLS LPVHNVGGLPWLLAVPCALLIAACISSAGGFFSVAAHLLRHRPPWLWAVMLGLLWYVLEAVYALVLGFPWLELSGALAAW PLLVQGADAIGSYALAGLWTTIALWCGLALLPHPAQTAPAAEKNMRQNGKAAHNCRMPWRPACLASGLLMAALLLGYGAL RMHRQPLTSDPGGPQSVLALFVEGNVDQNQKWLPAFQRRTVDLYLKLTYDALAQKPDERPLIIWPETALPFFFETNQLHS PRVRQLPAITGCPLLLGAPGVERLPDKKEPAVFNRAFLLTPPSGEAAAHYDKEHLVPFGEYLPEWLNWGFLEALLQGVGV YETGTAIAPLRYGNLALGMLICYEGIFPWLAQARVQDGANILVDISNDGWFGATPAARQHLYLTVLRALEQNRWILRGTN TGISVVVDSRGRLVMRGDQFREQAIWGRAALESRPSLYHRLWPWPLPAATALLTGLVLWGPGGSIRRRTRV
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=556, Percent_Identity=28.5971223021583, Blast_Score=132, Evalue=8e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 60376; Mature: 60245
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFPSAASRPEGRILPVALAGALGLWLGFPNDLAGIPPLVLLWPLALAWLGLHAATRGA CCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH AMRYGWLTSLAGSIAALYWLSLPVHNVGGLPWLLAVPCALLIAACISSAGGFFSVAAHLL HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RHRPPWLWAVMLGLLWYVLEAVYALVLGFPWLELSGALAAWPLLVQGADAIGSYALAGLW HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH TTIALWCGLALLPHPAQTAPAAEKNMRQNGKAAHNCRMPWRPACLASGLLMAALLLGYGA HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LRMHRQPLTSDPGGPQSVLALFVEGNVDQNQKWLPAFQRRTVDLYLKLTYDALAQKPDER HHHCCCCCCCCCCCHHHHEEEEEECCCCCCCCHHHHHHCCEEEEEEEEEHHHHHCCCCCC PLIIWPETALPFFFETNQLHSPRVRQLPAITGCPLLLGAPGVERLPDKKEPAVFNRAFLL CEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCEECCCCHHHCCCCCCCCHHCCEEEE TPPSGEAAAHYDKEHLVPFGEYLPEWLNWGFLEALLQGVGVYETGTAIAPLRYGNLALGM ECCCCCCHHCCCHHHCCCHHHHHHHHHCCHHHHHHHHCCCEECCCCEECCEECCCHHHHH LICYEGIFPWLAQARVQDGANILVDISNDGWFGATPAARQHLYLTVLRALEQNRWILRGT HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEC NTGISVVVDSRGRLVMRGDQFREQAIWGRAALESRPSLYHRLWPWPLPAATALLTGLVLW CCCEEEEECCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHEE GPGGSIRRRTRV CCCCCCCCCCCC >Mature Secondary Structure TFFPSAASRPEGRILPVALAGALGLWLGFPNDLAGIPPLVLLWPLALAWLGLHAATRGA CCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH AMRYGWLTSLAGSIAALYWLSLPVHNVGGLPWLLAVPCALLIAACISSAGGFFSVAAHLL HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RHRPPWLWAVMLGLLWYVLEAVYALVLGFPWLELSGALAAWPLLVQGADAIGSYALAGLW HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH TTIALWCGLALLPHPAQTAPAAEKNMRQNGKAAHNCRMPWRPACLASGLLMAALLLGYGA HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LRMHRQPLTSDPGGPQSVLALFVEGNVDQNQKWLPAFQRRTVDLYLKLTYDALAQKPDER HHHCCCCCCCCCCCHHHHEEEEEECCCCCCCCHHHHHHCCEEEEEEEEEHHHHHCCCCCC PLIIWPETALPFFFETNQLHSPRVRQLPAITGCPLLLGAPGVERLPDKKEPAVFNRAFLL CEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCEECCCCHHHCCCCCCCCHHCCEEEE TPPSGEAAAHYDKEHLVPFGEYLPEWLNWGFLEALLQGVGVYETGTAIAPLRYGNLALGM ECCCCCCHHCCCHHHCCCHHHHHHHHHCCHHHHHHHHCCCEECCCCEECCEECCCHHHHH LICYEGIFPWLAQARVQDGANILVDISNDGWFGATPAARQHLYLTVLRALEQNRWILRGT HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEC NTGISVVVDSRGRLVMRGDQFREQAIWGRAALESRPSLYHRLWPWPLPAATALLTGLVLW CCCEEEEECCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHEE GPGGSIRRRTRV CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA