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The map label for this gene is sufB [C]

Identifier: 220905185

GI number: 220905185

Start: 2316409

End: 2317572

Strand: Direct

Name: sufB [C]

Synonym: Ddes_1923

Alternate gene names: 220905185

Gene position: 2316409-2317572 (Clockwise)

Preceding gene: 220905184

Following gene: 220905186

Centisome position: 80.61

GC content: 58.25

Gene sequence:

>1164_bases
ATGAGCACAGTCAATCTCTCCCGGTACAGCTTCAACGGCAACGAAGGTGCCGCCCCCATAGAAAACCTCGCCAGCCTGCC
CGCCGCGGACAAGGAACGCCTTGTACACGCGGGCATTGACGTGAACGATCACGCGGTGAGCGGCGCATTCATGCAGCTCA
ACCATGCGGGGGTTCACTGCCATGCAAGCCATGAAGGCCTTGACCTTATGGACATCCGCGAGGCCCTGAAAAAATTTGAC
GGCCTGCCCCAGTATTACTGGAAGCTGCTTGATCCGGAAAAAGACGAGTTTACCCGCCTCACGCGCGAGCATTGCAACGG
CGGCTACTTTGTGCGCGCCCGCAAGGGAGCCAAAATCACCCAGCCTGTGCAGTCATGCATGTTCATCAAGGGACACGGTG
CGGGACAGAGCATCCACAACATCGTGGTGGTGGAAGAAGGAGCCGAGCTGCATATTCTGGGCGGCTGTGCCACGGCCCAC
GATGCCAACGATACGGCCCACCTGGGCATTACCGAATATTATGTGGAAAAAGGCGGCAAGCTCACCTTCACAATGATCCA
TAACTGGGGAACGAGCACCACGGTCCGCCCCCGCTCCGCAGGCATTGTGGAAGCCGGAGGAGAGTTTCAGAACAACTACA
TCCTGCTCAAGCCCGTGGCCGACCTGCAGATGTATCCGACCATGAAGCTTCAGGGCAGTGGTGCTGTTGCGCGCTTCAAT
TCCGTTATTGTCACGCCCGAAGGCTCCCATGTGGACTGCGGCAACCGCATTGAACTCAATGCGCCCGACACACGCGGCGA
AATAGTTTCGCGTACCCTCACCACAGGTGGAACCATAATCAACCGTGGTTTCATAGGCGCATCCGCCGCCCCCGCCAGGG
GACATCTGGAATGCAAGGGCCTTATCCTTGGCGGCGGGCGCATACACGCCATCCCCGAGCTGGACAGCAACCAGGACGGT
GTGGAACTGTCGCACGAGGCCGCCGTGGGCAAAATAGCCCAGGAAGAAATAGAGTACCTCATGGCGCGCGGTCTTGATGA
AGATGAAGCCGCATCCACCATTGTGCGCGGCTTTCTCAATGTGGACATTATGGGCCTGCCCGACCAGTTGCAAAAGGCCA
TGGATGAACAGATCGCGCTGCTGGAAACCGGCAACGCCATGTAA

Upstream 100 bases:

>100_bases
CGCGCGAAATTCTCGACCATATCGCCAATCACGGTTATCAGGAATGCCTGCGCTGCCTGGCCGGCGACATGTTTGGCAAA
ATTGCGGAGGCCCCCCTCAA

Downstream 100 bases:

>100_bases
GACCACTGCGGCGCAAACAGATTGCCTGCCCGCATGTGCCGTCACGCAAAAACAGCGGCCGAAAATGCCTGTACGGGCAT
CTCCGGCTTGACCGCCAAAC

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSTVNLSRYSFNGNEGAAPIENLASLPAADKERLVHAGIDVNDHAVSGAFMQLNHAGVHCHASHEGLDLMDIREALKKFD
GLPQYYWKLLDPEKDEFTRLTREHCNGGYFVRARKGAKITQPVQSCMFIKGHGAGQSIHNIVVVEEGAELHILGGCATAH
DANDTAHLGITEYYVEKGGKLTFTMIHNWGTSTTVRPRSAGIVEAGGEFQNNYILLKPVADLQMYPTMKLQGSGAVARFN
SVIVTPEGSHVDCGNRIELNAPDTRGEIVSRTLTTGGTIINRGFIGASAAPARGHLECKGLILGGGRIHAIPELDSNQDG
VELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLNVDIMGLPDQLQKAMDEQIALLETGNAM

Sequences:

>Translated_387_residues
MSTVNLSRYSFNGNEGAAPIENLASLPAADKERLVHAGIDVNDHAVSGAFMQLNHAGVHCHASHEGLDLMDIREALKKFD
GLPQYYWKLLDPEKDEFTRLTREHCNGGYFVRARKGAKITQPVQSCMFIKGHGAGQSIHNIVVVEEGAELHILGGCATAH
DANDTAHLGITEYYVEKGGKLTFTMIHNWGTSTTVRPRSAGIVEAGGEFQNNYILLKPVADLQMYPTMKLQGSGAVARFN
SVIVTPEGSHVDCGNRIELNAPDTRGEIVSRTLTTGGTIINRGFIGASAAPARGHLECKGLILGGGRIHAIPELDSNQDG
VELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLNVDIMGLPDQLQKAMDEQIALLETGNAM
>Mature_386_residues
STVNLSRYSFNGNEGAAPIENLASLPAADKERLVHAGIDVNDHAVSGAFMQLNHAGVHCHASHEGLDLMDIREALKKFDG
LPQYYWKLLDPEKDEFTRLTREHCNGGYFVRARKGAKITQPVQSCMFIKGHGAGQSIHNIVVVEEGAELHILGGCATAHD
ANDTAHLGITEYYVEKGGKLTFTMIHNWGTSTTVRPRSAGIVEAGGEFQNNYILLKPVADLQMYPTMKLQGSGAVARFNS
VIVTPEGSHVDCGNRIELNAPDTRGEIVSRTLTTGGTIINRGFIGASAAPARGHLECKGLILGGGRIHAIPELDSNQDGV
ELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLNVDIMGLPDQLQKAMDEQIALLETGNAM

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=329, Percent_Identity=23.4042553191489, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 41734; Mature: 41603

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVNLSRYSFNGNEGAAPIENLASLPAADKERLVHAGIDVNDHAVSGAFMQLNHAGVHC
CCCEEEEEEEECCCCCCCCHHHHHHCCCCCCHHEEEECCCCCCCCCCCEEEEEECCCEEE
HASHEGLDLMDIREALKKFDGLPQYYWKLLDPEKDEFTRLTREHCNGGYFVRARKGAKIT
ECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
QPVQSCMFIKGHGAGQSIHNIVVVEEGAELHILGGCATAHDANDTAHLGITEYYVEKGGK
HHHHHEEEEEECCCCCCEEEEEEEECCCEEEEEECEECCCCCCCCEECCHHHHHHHCCCC
LTFTMIHNWGTSTTVRPRSAGIVEAGGEFQNNYILLKPVADLQMYPTMKLQGSGAVARFN
EEEEEEECCCCCCEECCCCCCEEECCCCCCCCEEEEEECCCCEECCCEEECCCCCEEEEC
SVIVTPEGSHVDCGNRIELNAPDTRGEIVSRTLTTGGTIINRGFIGASAAPARGHLECKG
EEEECCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEE
LILGGGRIHAIPELDSNQDGVELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLN
EEEECCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
VDIMGLPDQLQKAMDEQIALLETGNAM
EEEECCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
STVNLSRYSFNGNEGAAPIENLASLPAADKERLVHAGIDVNDHAVSGAFMQLNHAGVHC
CCEEEEEEEECCCCCCCCHHHHHHCCCCCCHHEEEECCCCCCCCCCCEEEEEECCCEEE
HASHEGLDLMDIREALKKFDGLPQYYWKLLDPEKDEFTRLTREHCNGGYFVRARKGAKIT
ECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
QPVQSCMFIKGHGAGQSIHNIVVVEEGAELHILGGCATAHDANDTAHLGITEYYVEKGGK
HHHHHEEEEEECCCCCCEEEEEEEECCCEEEEEECEECCCCCCCCEECCHHHHHHHCCCC
LTFTMIHNWGTSTTVRPRSAGIVEAGGEFQNNYILLKPVADLQMYPTMKLQGSGAVARFN
EEEEEEECCCCCCEECCCCCCEEECCCCCCCCEEEEEECCCCEECCCEEECCCCCEEEEC
SVIVTPEGSHVDCGNRIELNAPDTRGEIVSRTLTTGGTIINRGFIGASAAPARGHLECKG
EEEECCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEE
LILGGGRIHAIPELDSNQDGVELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLN
EEEECCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
VDIMGLPDQLQKAMDEQIALLETGNAM
EEEECCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]