| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905134
Identifier: 220905134
GI number: 220905134
Start: 2256162
End: 2256959
Strand: Direct
Name: 220905134
Synonym: Ddes_1872
Alternate gene names: NA
Gene position: 2256162-2256959 (Clockwise)
Preceding gene: 220905123
Following gene: 220905135
Centisome position: 78.52
GC content: 60.9
Gene sequence:
>798_bases ATGCTTACAACGCTTGTGATCTATCTTGCCTGTGGCGCGGTGGCTGGTGTGCTGGCCGGGCTTCTGGGCGTGGGGGGCGG CATTGTGCTGGTCCCCATGATGGTGGCTATTTTTCCCACCGTGGGCGTTCCGGCGGAATATGTGCAGCAGATGGCGCTCG GCACGTCGCTTGCCTCCATCATGATCACATCCATTTCCAGCGCCCGCGCCCATAACAAGCGCGGGGCCGTACACTGGGAC ATCTTCCGCAATATTACCCCGGGCATTCTTCTGGGTACGTTCGCAGGCGGGCTTATTGCCACACACATGCCCACCCTGGC GCTCAAGGTCATCTTCATCTGCTTTCTTGTTGTGGTGGCGGCGCAGATGCTTTCCGGCTACCGCCCCCCGGCCACACGTA GCATGCCGGGCTTTGCGGGCACATCAGGCGTGGGCCTGGGCATAGGACTTCTTTCAAGCTTTGTGGGCATTGGCGGCGGC ACTATTTCCGTACCTTTCATGACTACATGCAACGTTCCCCTGCACCATGCCGTGGGTACTTCGGCCGCCATCGGCTTTCC CATCGCCGTGGCGGGCACGCTTGGCTATATTGTAGGCGGCTGGGGGCGTCCCGACCTGCCTTCAATGGCTCTGGGGTTTG TAAACCTGTGGGCGCTGCTCGGCATTGCTTCGGCCAGCTTTCTTACCGCACCCCTGGGGGTAAAACTGTCGCACGCCCTG CCCGCCGACAAGCTCAAGCGCGGCTTTGCCTGCTTTCTGATCATTGTGGCGGCCAGGATGGCCTGGGGATTGCTGTAA
Upstream 100 bases:
>100_bases TTCGGCGATTTGCCCGGCCCGGCTTGCCGCCTTTTTGTCAGGGCCGTTTTTTCGTATTTGTTTTCAGTATGTTCCGGAAA TTTTCAGGAGGATGCGACCA
Downstream 100 bases:
>100_bases CCATAAATTGCTGTCAGGATGGCGGTATGAAACTTTATACCTACAACCACAAGCTGGCCGAATCCGTCTGGTGGAACCTG CTCTGGCTGACTCTCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLTTLVIYLACGAVAGVLAGLLGVGGGIVLVPMMVAIFPTVGVPAEYVQQMALGTSLASIMITSISSARAHNKRGAVHWD IFRNITPGILLGTFAGGLIATHMPTLALKVIFICFLVVVAAQMLSGYRPPATRSMPGFAGTSGVGLGIGLLSSFVGIGGG TISVPFMTTCNVPLHHAVGTSAAIGFPIAVAGTLGYIVGGWGRPDLPSMALGFVNLWALLGIASASFLTAPLGVKLSHAL PADKLKRGFACFLIIVAARMAWGLL
Sequences:
>Translated_265_residues MLTTLVIYLACGAVAGVLAGLLGVGGGIVLVPMMVAIFPTVGVPAEYVQQMALGTSLASIMITSISSARAHNKRGAVHWD IFRNITPGILLGTFAGGLIATHMPTLALKVIFICFLVVVAAQMLSGYRPPATRSMPGFAGTSGVGLGIGLLSSFVGIGGG TISVPFMTTCNVPLHHAVGTSAAIGFPIAVAGTLGYIVGGWGRPDLPSMALGFVNLWALLGIASASFLTAPLGVKLSHAL PADKLKRGFACFLIIVAARMAWGLL >Mature_265_residues MLTTLVIYLACGAVAGVLAGLLGVGGGIVLVPMMVAIFPTVGVPAEYVQQMALGTSLASIMITSISSARAHNKRGAVHWD IFRNITPGILLGTFAGGLIATHMPTLALKVIFICFLVVVAAQMLSGYRPPATRSMPGFAGTSGVGLGIGLLSSFVGIGGG TISVPFMTTCNVPLHHAVGTSAAIGFPIAVAGTLGYIVGGWGRPDLPSMALGFVNLWALLGIASASFLTAPLGVKLSHAL PADKLKRGFACFLIIVAARMAWGLL
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 27012; Mature: 27012
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTLVIYLACGAVAGVLAGLLGVGGGIVLVPMMVAIFPTVGVPAEYVQQMALGTSLASI CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH MITSISSARAHNKRGAVHWDIFRNITPGILLGTFAGGLIATHMPTLALKVIFICFLVVVA HHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQMLSGYRPPATRSMPGFAGTSGVGLGIGLLSSFVGIGGGTISVPFMTTCNVPLHHAVGT HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECEEEECCCCHHHHCCC SAAIGFPIAVAGTLGYIVGGWGRPDLPSMALGFVNLWALLGIASASFLTAPLGVKLSHAL CHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC PADKLKRGFACFLIIVAARMAWGLL CHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTTLVIYLACGAVAGVLAGLLGVGGGIVLVPMMVAIFPTVGVPAEYVQQMALGTSLASI CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH MITSISSARAHNKRGAVHWDIFRNITPGILLGTFAGGLIATHMPTLALKVIFICFLVVVA HHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQMLSGYRPPATRSMPGFAGTSGVGLGIGLLSSFVGIGGGTISVPFMTTCNVPLHHAVGT HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECEEEECCCCHHHHCCC SAAIGFPIAVAGTLGYIVGGWGRPDLPSMALGFVNLWALLGIASASFLTAPLGVKLSHAL CHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC PADKLKRGFACFLIIVAARMAWGLL CHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]