Click here to switch to the map view.

The map label for this gene is 220905124

Identifier: 220905124

GI number: 220905124

Start: 2246186

End: 2246827

Strand: Reverse

Name: 220905124

Synonym: Ddes_1862

Alternate gene names: NA

Gene position: 2246827-2246186 (Counterclockwise)

Preceding gene: 220905125

Following gene: 220905118

Centisome position: 78.19

GC content: 54.52

Gene sequence:

>642_bases
ATGAGCAACACCGTGAAAACTGACGGCAAGGCCCCTGTAACCGCCATACCTTCCGAACATTCCCCCTTTGTGGCGGATCA
GGGCAGGCAAACCCGCAACGCGGCTCAGACCAGGCAGAGAATACTGCTGGCGGCGCGTGGCCTCTTTGCCAACAATAACT
ACGAAAGCGTGGGCACACGGGAAATAGCGGCCAAGGCCGGGGTCAATGCCACGCTTATCAACAGATACTTCGGCTCCAAG
AAGAAGCTTTTTGTGGCCGTAGTGGAATCCCTTAGTGAACTGATACCTCCGAGAGACGTGGAGGACGACGTGGCTGATCT
GCTGGATCAGGCATTGAACAGCATTGTGCATGAAGGAGAACATAGCCAGTGGCTGGACGAGTTTCGCATAATCCTTTTTT
CGGCGCTTGATCAGGAAGTTTCTGATATTATAGCCGATTTTTTTGAAAAAAGACGTAAGGGACTGGCGCGGCGATTGACT
GGCCCCGGTGCTGCCGCCAGAGCAGATGCGGTTTTTTCGCTTCTGACCGGGGCGGCAATAGTCGTGAGCCTGCTGCGCGG
CAATCAGAAAAATGATCTGGACCAGAAGGAGTTTCGCAAAAAACTGGGCCAGGTGCTGGTCCCGCTGCTTGCAGCCGGGT
AA

Upstream 100 bases:

>100_bases
CCAGGGCGGGTGCGCGCCGGAAGAATAGATTTTTCTACGCACGCATGGCCGGGCATGGCTTCCGCCTTTTCCGGTCATCA
TAATCGAGTGCAGGGACGCC

Downstream 100 bases:

>100_bases
CAGATGCTCACGCAGCCGCCAGAGCGATTTAAAAGTTAACTTGCTCTGGAGCCGCAACAAAATACGCAGAGGCGGAACAG
CGGGGCAAGCTGCCCGGACT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSNTVKTDGKAPVTAIPSEHSPFVADQGRQTRNAAQTRQRILLAARGLFANNNYESVGTREIAAKAGVNATLINRYFGSK
KKLFVAVVESLSELIPPRDVEDDVADLLDQALNSIVHEGEHSQWLDEFRIILFSALDQEVSDIIADFFEKRRKGLARRLT
GPGAAARADAVFSLLTGAAIVVSLLRGNQKNDLDQKEFRKKLGQVLVPLLAAG

Sequences:

>Translated_213_residues
MSNTVKTDGKAPVTAIPSEHSPFVADQGRQTRNAAQTRQRILLAARGLFANNNYESVGTREIAAKAGVNATLINRYFGSK
KKLFVAVVESLSELIPPRDVEDDVADLLDQALNSIVHEGEHSQWLDEFRIILFSALDQEVSDIIADFFEKRRKGLARRLT
GPGAAARADAVFSLLTGAAIVVSLLRGNQKNDLDQKEFRKKLGQVLVPLLAAG
>Mature_212_residues
SNTVKTDGKAPVTAIPSEHSPFVADQGRQTRNAAQTRQRILLAARGLFANNNYESVGTREIAAKAGVNATLINRYFGSKK
KLFVAVVESLSELIPPRDVEDDVADLLDQALNSIVHEGEHSQWLDEFRIILFSALDQEVSDIIADFFEKRRKGLARRLTG
PGAAARADAVFSLLTGAAIVVSLLRGNQKNDLDQKEFRKKLGQVLVPLLAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23251; Mature: 23120

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTVKTDGKAPVTAIPSEHSPFVADQGRQTRNAAQTRQRILLAARGLFANNNYESVGTR
CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EIAAKAGVNATLINRYFGSKKKLFVAVVESLSELIPPRDVEDDVADLLDQALNSIVHEGE
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
HSQWLDEFRIILFSALDQEVSDIIADFFEKRRKGLARRLTGPGAAARADAVFSLLTGAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VVSLLRGNQKNDLDQKEFRKKLGQVLVPLLAAG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNTVKTDGKAPVTAIPSEHSPFVADQGRQTRNAAQTRQRILLAARGLFANNNYESVGTR
CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EIAAKAGVNATLINRYFGSKKKLFVAVVESLSELIPPRDVEDDVADLLDQALNSIVHEGE
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
HSQWLDEFRIILFSALDQEVSDIIADFFEKRRKGLARRLTGPGAAARADAVFSLLTGAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VVSLLRGNQKNDLDQKEFRKKLGQVLVPLLAAG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA