| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905116
Identifier: 220905116
GI number: 220905116
Start: 2234670
End: 2235515
Strand: Direct
Name: 220905116
Synonym: Ddes_1853
Alternate gene names: NA
Gene position: 2234670-2235515 (Clockwise)
Preceding gene: 220905115
Following gene: 220905117
Centisome position: 77.77
GC content: 58.63
Gene sequence:
>846_bases ATGAAAAAATGCCTGATCCTTCTTGGCGCACTCTGCATCATGCAGGGAACAGCCCTGGCCGCAGACAATCTTGACGCCCT TTACGGCATTGCCAACAGACCGTCCTACATCAAGCACTACGAGGCCGACAAAGAGCACAATGTGCTGCTCAACCCCTACC TTCAGGTAGCCACCAAGGATTTTCACGCCGTACTTGACGCCAAAAGGCCCGTTTACAACTACGTCATCACCCCCGAAGGC GGCGTGGCCCTTATTGAAGAAGCCCCGCATCCCTACGGGCGCACCTATCCCAACGGTTTTTTCCGCCCCGAGGACAAGTC GCAGCGCAAAGCCGGCACCACAGAAAACTACGGCCATGTGTCCGGCACGGCGGGCGGCCCCGGCCGCATCAGCGGCGAAA TAATCAACGACCGCAAAAACGGGTGCTGGCTCGTCAACAACAAGTCCGGGCGCTATTCCAAACGCAATATTGACCGCACG CCGGAACAGCTGCTCAATGCCTTTGTACTCATGCAGGAGACCATTGATCCCGGCAGCCAGCCCTGGTGCAAGGGAGCGGC CTACCTGCTGGGCTATGCCCCGGACTACGTGAGCGAACCTCTGCGCAAAAGCCCAGATATGCGCTATGAAGACCCGGAAA ACAAAAAAAACGCCCACATTCTGGTCGTTCCCGGCGTCAAGCCTCCCCATTTCGACATACCGCAGTACCAGCATCTTTCG CTTGATGCCGTTGCCCCCGGGACAAGTTCCGGCACAGCGCCCGCTGAGGCTGCCAAACCGGCGGGCAAAACCACCAAGGG CGTTCCGGCCCCTGAAAAGGCCGCCTACAATGACGACCCGTCCTAG
Upstream 100 bases:
>100_bases AGAAAAGCTGGCCATGAAGGACGTACACAGATGGCTCGGCTCCAAGGTACGCGTACTGCTTGACCAGCCGCTGTAGGGGC TAACCACAAGGAGCAATAAA
Downstream 100 bases:
>100_bases GACGTTCGGTTTAAAAACATATAATCTCAGAGTGTTACTACGCTCGCTACGGCGCTTAACAGCGCAAGTAATTCGCGTTT ACGCCTTTGTGGCGGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKKCLILLGALCIMQGTALAADNLDALYGIANRPSYIKHYEADKEHNVLLNPYLQVATKDFHAVLDAKRPVYNYVITPEG GVALIEEAPHPYGRTYPNGFFRPEDKSQRKAGTTENYGHVSGTAGGPGRISGEIINDRKNGCWLVNNKSGRYSKRNIDRT PEQLLNAFVLMQETIDPGSQPWCKGAAYLLGYAPDYVSEPLRKSPDMRYEDPENKKNAHILVVPGVKPPHFDIPQYQHLS LDAVAPGTSSGTAPAEAAKPAGKTTKGVPAPEKAAYNDDPS
Sequences:
>Translated_281_residues MKKCLILLGALCIMQGTALAADNLDALYGIANRPSYIKHYEADKEHNVLLNPYLQVATKDFHAVLDAKRPVYNYVITPEG GVALIEEAPHPYGRTYPNGFFRPEDKSQRKAGTTENYGHVSGTAGGPGRISGEIINDRKNGCWLVNNKSGRYSKRNIDRT PEQLLNAFVLMQETIDPGSQPWCKGAAYLLGYAPDYVSEPLRKSPDMRYEDPENKKNAHILVVPGVKPPHFDIPQYQHLS LDAVAPGTSSGTAPAEAAKPAGKTTKGVPAPEKAAYNDDPS >Mature_281_residues MKKCLILLGALCIMQGTALAADNLDALYGIANRPSYIKHYEADKEHNVLLNPYLQVATKDFHAVLDAKRPVYNYVITPEG GVALIEEAPHPYGRTYPNGFFRPEDKSQRKAGTTENYGHVSGTAGGPGRISGEIINDRKNGCWLVNNKSGRYSKRNIDRT PEQLLNAFVLMQETIDPGSQPWCKGAAYLLGYAPDYVSEPLRKSPDMRYEDPENKKNAHILVVPGVKPPHFDIPQYQHLS LDAVAPGTSSGTAPAEAAKPAGKTTKGVPAPEKAAYNDDPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30688; Mature: 30688
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCLILLGALCIMQGTALAADNLDALYGIANRPSYIKHYEADKEHNVLLNPYLQVATKD CCHHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCCHHHHHCCCCCCCCEEECHHHHHHHHH FHAVLDAKRPVYNYVITPEGGVALIEEAPHPYGRTYPNGFFRPEDKSQRKAGTTENYGHV HHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC SGTAGGPGRISGEIINDRKNGCWLVNNKSGRYSKRNIDRTPEQLLNAFVLMQETIDPGSQ CCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC PWCKGAAYLLGYAPDYVSEPLRKSPDMRYEDPENKKNAHILVVPGVKPPHFDIPQYQHLS CHHHHHHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCE LDAVAPGTSSGTAPAEAAKPAGKTTKGVPAPEKAAYNDDPS EEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKCLILLGALCIMQGTALAADNLDALYGIANRPSYIKHYEADKEHNVLLNPYLQVATKD CCHHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCCHHHHHCCCCCCCCEEECHHHHHHHHH FHAVLDAKRPVYNYVITPEGGVALIEEAPHPYGRTYPNGFFRPEDKSQRKAGTTENYGHV HHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC SGTAGGPGRISGEIINDRKNGCWLVNNKSGRYSKRNIDRTPEQLLNAFVLMQETIDPGSQ CCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC PWCKGAAYLLGYAPDYVSEPLRKSPDMRYEDPENKKNAHILVVPGVKPPHFDIPQYQHLS CHHHHHHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCE LDAVAPGTSSGTAPAEAAKPAGKTTKGVPAPEKAAYNDDPS EEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA