| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905111
Identifier: 220905111
GI number: 220905111
Start: 2229709
End: 2230644
Strand: Reverse
Name: 220905111
Synonym: Ddes_1848
Alternate gene names: NA
Gene position: 2230644-2229709 (Counterclockwise)
Preceding gene: 220905118
Following gene: 220905108
Centisome position: 77.63
GC content: 55.98
Gene sequence:
>936_bases ATGTACAGACTGACAACTCTGCTGGTAATGGGGCTTTTGCTTTCCGCATCTATGGCGCTGGCTGCCGGGCCGGGCCATTA TGAAAAAAATGTGGCGGCCTGGAAGCCCCACGGGGCCGTGAACGGCCTTGAGTACAAAATGGCCCTGAACCCCGCCCTGT TTAATACGGACAAGGCCAAGGCATCGTTTAAAAAACTCTGGGATGCCCTGTCTGCCGCAGCTTCAAAAAACGGTTTCGTG CTGATAAAATCGGAAAAAGACAAATTACGCCTGCGTGCAAGAAGCTATTATGACACGGAAAATCTCGCCCTGCGCGATGC GGGCTTTGTGGTGCGGATTACCACCAACCACAAGAAGGACGGCAGCGCCAAAGACGGCAGAAGACTGACCGTAAAAACAT CCGGCAAGGATCCTGCCTTTATTCTGGGCACGCCGCTGGACCCGGTGGGCATCAAGGGCGAGATCGCCGCTGAAGACCAC CCGTATCTTGACACCCAGGGTACTATGGGCAGCCGTCTGGAAAAAAGCGTGAACATACGCGGCGAAGAGCATACCTTCGG CGATCTCGACCGGCCGCAGTTGCAGCAGTTTTCTCGTTTCGTGCCAGCGCTGGCCAGGAGCGGGCTGGCCCCTGAAACAC CCCTTAAACCCGTAACTGTTTGCACCTATTCTGCCAAGATGGGGTTTGTAGATCTGGCCGGAGTTGAGGCGGAGATAACC TTCGAGGCATGGACGCAGCATTGGGGCGGAGAGCCGATTGCGCTGGAAGTTTCTGTGGGCATTGAAGATCAGGATTATTA TGCCATTCCCAAGGTTGTGGCCGCCGGGGACGAGTTTTACCGCAAGGTGCTCGTGCAGGGGCTTGCCCACATGAAGCTGC CTGATGGCGGCCAGTTCGGCGGTTCCAAGCTCAAGATGCTGCGGGATATGCAGTAA
Upstream 100 bases:
>100_bases AGATGCTCTTATGCGTTGCATCCACCGATTTTATTGTACAGGGGCGTGGTGCGTGTGGCATGGTTACGCCAAATAATTTC AGTAGCCGCAAGGAGTTCCT
Downstream 100 bases:
>100_bases GCGCCTGTTGGCCGGGCGAGCTTCGGGGCCAATGTAAAAAGCGGGGTAGTCCCCGCTTTTTACATTGTGGCAGATGGCCG GATGTTTTTCTTTGGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MYRLTTLLVMGLLLSASMALAAGPGHYEKNVAAWKPHGAVNGLEYKMALNPALFNTDKAKASFKKLWDALSAAASKNGFV LIKSEKDKLRLRARSYYDTENLALRDAGFVVRITTNHKKDGSAKDGRRLTVKTSGKDPAFILGTPLDPVGIKGEIAAEDH PYLDTQGTMGSRLEKSVNIRGEEHTFGDLDRPQLQQFSRFVPALARSGLAPETPLKPVTVCTYSAKMGFVDLAGVEAEIT FEAWTQHWGGEPIALEVSVGIEDQDYYAIPKVVAAGDEFYRKVLVQGLAHMKLPDGGQFGGSKLKMLRDMQ
Sequences:
>Translated_311_residues MYRLTTLLVMGLLLSASMALAAGPGHYEKNVAAWKPHGAVNGLEYKMALNPALFNTDKAKASFKKLWDALSAAASKNGFV LIKSEKDKLRLRARSYYDTENLALRDAGFVVRITTNHKKDGSAKDGRRLTVKTSGKDPAFILGTPLDPVGIKGEIAAEDH PYLDTQGTMGSRLEKSVNIRGEEHTFGDLDRPQLQQFSRFVPALARSGLAPETPLKPVTVCTYSAKMGFVDLAGVEAEIT FEAWTQHWGGEPIALEVSVGIEDQDYYAIPKVVAAGDEFYRKVLVQGLAHMKLPDGGQFGGSKLKMLRDMQ >Mature_311_residues MYRLTTLLVMGLLLSASMALAAGPGHYEKNVAAWKPHGAVNGLEYKMALNPALFNTDKAKASFKKLWDALSAAASKNGFV LIKSEKDKLRLRARSYYDTENLALRDAGFVVRITTNHKKDGSAKDGRRLTVKTSGKDPAFILGTPLDPVGIKGEIAAEDH PYLDTQGTMGSRLEKSVNIRGEEHTFGDLDRPQLQQFSRFVPALARSGLAPETPLKPVTVCTYSAKMGFVDLAGVEAEIT FEAWTQHWGGEPIALEVSVGIEDQDYYAIPKVVAAGDEFYRKVLVQGLAHMKLPDGGQFGGSKLKMLRDMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34001; Mature: 34001
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLTTLLVMGLLLSASMALAAGPGHYEKNVAAWKPHGAVNGLEYKMALNPALFNTDKAK CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEECCCCCCCCEEEEEEECCHHCCCCHHH ASFKKLWDALSAAASKNGFVLIKSEKDKLRLRARSYYDTENLALRDAGFVVRITTNHKKD HHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHCCCCCCEEEECCCEEEEEECCCCCC GSAKDGRRLTVKTSGKDPAFILGTPLDPVGIKGEIAAEDHPYLDTQGTMGSRLEKSVNIR CCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCC GEEHTFGDLDRPQLQQFSRFVPALARSGLAPETPLKPVTVCTYSAKMGFVDLAGVEAEIT CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEE FEAWTQHWGGEPIALEVSVGIEDQDYYAIPKVVAAGDEFYRKVLVQGLAHMKLPDGGQFG HHHHHHHCCCCCEEEEEEECCCCCCCEECCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC GSKLKMLRDMQ CHHHHHHHCCC >Mature Secondary Structure MYRLTTLLVMGLLLSASMALAAGPGHYEKNVAAWKPHGAVNGLEYKMALNPALFNTDKAK CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEECCCCCCCCEEEEEEECCHHCCCCHHH ASFKKLWDALSAAASKNGFVLIKSEKDKLRLRARSYYDTENLALRDAGFVVRITTNHKKD HHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHCCCCCCEEEECCCEEEEEECCCCCC GSAKDGRRLTVKTSGKDPAFILGTPLDPVGIKGEIAAEDHPYLDTQGTMGSRLEKSVNIR CCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCC GEEHTFGDLDRPQLQQFSRFVPALARSGLAPETPLKPVTVCTYSAKMGFVDLAGVEAEIT CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEE FEAWTQHWGGEPIALEVSVGIEDQDYYAIPKVVAAGDEFYRKVLVQGLAHMKLPDGGQFG HHHHHHHCCCCCEEEEEEECCCCCCCEECCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC GSKLKMLRDMQ CHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA