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The map label for this gene is yccF [H]

Identifier: 220905101

GI number: 220905101

Start: 2218692

End: 2219156

Strand: Reverse

Name: yccF [H]

Synonym: Ddes_1838

Alternate gene names: 220905101

Gene position: 2219156-2218692 (Counterclockwise)

Preceding gene: 220905102

Following gene: 220905100

Centisome position: 77.23

GC content: 60.0

Gene sequence:

>465_bases
ATGAACAGTACCTTGGGCTGCCTTGGCAATGCCCTGTGGTTCATACTCGGTGGCTTTGTCATGGGCCTTGTGTGGTGGAT
GTTCGGCGTGCTCTGTTTTATCTCCATCATCGGCATTCCCTGGGGCCGCGCCTGTTTTGTCATGGGCAACTTCACCTTTT
TTCCCTTCGGCAAAATGCCCGTCTCGCGCGAGGTGCTCACCGGGCAGCCCGATGTGGGAACCGGCGTGCTGGGAACAGTG
GGCAATATCCTGTGGCTCGTCTTTGCGGGCATATGGATAGCCCTGGGGCATCTGGTGTCTGCGGCGGTCTGCGCCGTGAC
CATTATCGGCATTCCCTTTGCCTGGCAGCACGTCAAGCTGGCGGCCCTGGCCCTTTGCCCCATCGGCAAAACCGTTGTAC
CCGCTGCGGTGGCCCAGGCTGCAGAAGAGGCCGCCACCCTGCGCGGTTACCAAAAGCAGAAATAG

Upstream 100 bases:

>100_bases
GTCGTATGGCCGGGACACGCCGATGGACGAAAGCGTTGTGTCCCATGTTCCTTTGCGTTTGCGGTGCTACTCTGGCGTCT
GCCGCCGGACTGGGGGAAAC

Downstream 100 bases:

>100_bases
CGCCGGAATACGGCAGAGAACACAGGGGCAGGAGCAGAATCATGACGGAAAAAACGGCGTTGCGCCGGGCTATTTTTCTT
GACCGCGACGGAACCCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MNSTLGCLGNALWFILGGFVMGLVWWMFGVLCFISIIGIPWGRACFVMGNFTFFPFGKMPVSREVLTGQPDVGTGVLGTV
GNILWLVFAGIWIALGHLVSAAVCAVTIIGIPFAWQHVKLAALALCPIGKTVVPAAVAQAAEEAATLRGYQKQK

Sequences:

>Translated_154_residues
MNSTLGCLGNALWFILGGFVMGLVWWMFGVLCFISIIGIPWGRACFVMGNFTFFPFGKMPVSREVLTGQPDVGTGVLGTV
GNILWLVFAGIWIALGHLVSAAVCAVTIIGIPFAWQHVKLAALALCPIGKTVVPAAVAQAAEEAATLRGYQKQK
>Mature_154_residues
MNSTLGCLGNALWFILGGFVMGLVWWMFGVLCFISIIGIPWGRACFVMGNFTFFPFGKMPVSREVLTGQPDVGTGVLGTV
GNILWLVFAGIWIALGHLVSAAVCAVTIIGIPFAWQHVKLAALALCPIGKTVVPAAVAQAAEEAATLRGYQKQK

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=125, Percent_Identity=34.4, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 16370; Mature: 16370

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTLGCLGNALWFILGGFVMGLVWWMFGVLCFISIIGIPWGRACFVMGNFTFFPFGKMP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCC
VSREVLTGQPDVGTGVLGTVGNILWLVFAGIWIALGHLVSAAVCAVTIIGIPFAWQHVKL
CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AALALCPIGKTVVPAAVAQAAEEAATLRGYQKQK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSTLGCLGNALWFILGGFVMGLVWWMFGVLCFISIIGIPWGRACFVMGNFTFFPFGKMP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCC
VSREVLTGQPDVGTGVLGTVGNILWLVFAGIWIALGHLVSAAVCAVTIIGIPFAWQHVKL
CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AALALCPIGKTVVPAAVAQAAEEAATLRGYQKQK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]