| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905087
Identifier: 220905087
GI number: 220905087
Start: 2200242
End: 2201282
Strand: Reverse
Name: 220905087
Synonym: Ddes_1824
Alternate gene names: NA
Gene position: 2201282-2200242 (Counterclockwise)
Preceding gene: 220905093
Following gene: 220905086
Centisome position: 76.61
GC content: 60.52
Gene sequence:
>1041_bases ATGGCGGAACTTTGTATGAAGGTCATACACGTTCATGATGCGGTAGGTAGTGTTCTTTGTCACGATATAACCAGAATTGT TCCCGGCGAGAGCAAGGGACCGGTATTTCGCAAAGGGCACATTGTGCGGCCCGAAGATATCAAGGTGCTGCTCGAAACAG GCAAGGAGCATCTTTATGTTTTTGAACCGCTTGCCGGAATGGTACACGAAAATGACGCCGCCGCCCGCATCGTGGCCGCC GTCGTGGGGTCCAACCTCGTGCCCGGTGATCCCAAAGAAGGGCGTATCGACCTTGTAGCCGCCTGTGACGGCCTGTTGCG GGTAGACGTGCCAGCCCTGAACAGGATCAACGGCTTGGGCGAGATCACCATGGCCACCCTGCACGGCATGCAGTTCGTGA CAAAAGGGCGCGCTGTGGCGGGTACGCGGGTGGTTCCCCTTATGATCGGCGAGGACAAGCTGCGATGTCTTGAAGCCGCG GTAAGCCGGCCCGTCATTGAGGTGCTGCCTCTTGCGCGCGCCAGAGTGGGCGTGGTGACCACGGGCAGCGAGGTATACTA CGGGCGCATCCGTGACGCCTTCGGCCCGGTGCTGCGTAAAAAATTTGCCGCGCTGGGCAGTTCCGTCATGGGGCAGACCC TGACCAGCGACGAAGTGAGCATGACTGCCTCGGCCATTGCGGATTTTTTGCATCAGGGCGCGGACATGATTGTGGTCACG GGTGGCATGTCTGTTGATCCTGACGACCGCACGCCTGCGGCCATACGCGCCTCAGGGGCGCAAATTCTCTGCTATGGCGC GCCGGTTTATCCGGGCGCCATGTTTCTTTTGGCCTATGCGGAAGGCCCCGGCGGCCGCGTGCCGGTACTGGGGCTGCCGG GTTGCGTCATGTACCACAAGGCCAGCATTTTTGACCTCATCGTGCCGCGTCTGCTGGCCGGGGTCGAAGTTACGGCTGAA GATGTCGCAGCTCTGGGACACGGCGGTTTTTGCGCCGGCTGCCCGGAGTGCGCTTATCCCGTTTGTCCGTTCGGCAAGTA G
Upstream 100 bases:
>100_bases CACACTTTATAAATCCTGAATTTTATTTTGCATTTAGTTGTGGGAATGTTACGCTAAGCACAATCTGGGTATCAGGTCAT GCATCATCCGAGGAGCAACC
Downstream 100 bases:
>100_bases AGGTGTACCCGTACCGGTATCATAGTCAACGTGTCAGGATTCCCGCGGCGCCTTGCGGTGCGCGCAGGAAAATTGCGGCC TTGAGCGCGGATATCCCGCG
Product: molybdopterin binding domain-containing protein
Products: NA
Alternate protein names: 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Synthase; Formylmethanofuran Dehydrogenase Subunit E Region; Molybdenum Cofactor Biosynthesis Protein; Molybdopterin Biosynthesis; Molybdenum Cofactor Cytidylyltransferase; Molybdenum Cofactor Synthesis Domain Protein; Protein Family UPF; Formylmethanofuran Dehydrogenase Subunit E; L-Seryl-TRNA(Ser) Selenium Transferase Protein; MobA-Like Protein-Like Protein; 4-Diphosphocytidyl-2C-Methyl-D-Erythritolsynthas E; Molybdopterin Biosynthesis Protein MoeA; Transcriptional Regulator Fis Family; Molybdenum Cofactor Biosynthesis Family Protein
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MAELCMKVIHVHDAVGSVLCHDITRIVPGESKGPVFRKGHIVRPEDIKVLLETGKEHLYVFEPLAGMVHENDAAARIVAA VVGSNLVPGDPKEGRIDLVAACDGLLRVDVPALNRINGLGEITMATLHGMQFVTKGRAVAGTRVVPLMIGEDKLRCLEAA VSRPVIEVLPLARARVGVVTTGSEVYYGRIRDAFGPVLRKKFAALGSSVMGQTLTSDEVSMTASAIADFLHQGADMIVVT GGMSVDPDDRTPAAIRASGAQILCYGAPVYPGAMFLLAYAEGPGGRVPVLGLPGCVMYHKASIFDLIVPRLLAGVEVTAE DVAALGHGGFCAGCPECAYPVCPFGK
Sequences:
>Translated_346_residues MAELCMKVIHVHDAVGSVLCHDITRIVPGESKGPVFRKGHIVRPEDIKVLLETGKEHLYVFEPLAGMVHENDAAARIVAA VVGSNLVPGDPKEGRIDLVAACDGLLRVDVPALNRINGLGEITMATLHGMQFVTKGRAVAGTRVVPLMIGEDKLRCLEAA VSRPVIEVLPLARARVGVVTTGSEVYYGRIRDAFGPVLRKKFAALGSSVMGQTLTSDEVSMTASAIADFLHQGADMIVVT GGMSVDPDDRTPAAIRASGAQILCYGAPVYPGAMFLLAYAEGPGGRVPVLGLPGCVMYHKASIFDLIVPRLLAGVEVTAE DVAALGHGGFCAGCPECAYPVCPFGK >Mature_345_residues AELCMKVIHVHDAVGSVLCHDITRIVPGESKGPVFRKGHIVRPEDIKVLLETGKEHLYVFEPLAGMVHENDAAARIVAAV VGSNLVPGDPKEGRIDLVAACDGLLRVDVPALNRINGLGEITMATLHGMQFVTKGRAVAGTRVVPLMIGEDKLRCLEAAV SRPVIEVLPLARARVGVVTTGSEVYYGRIRDAFGPVLRKKFAALGSSVMGQTLTSDEVSMTASAIADFLHQGADMIVVTG GMSVDPDDRTPAAIRASGAQILCYGAPVYPGAMFLLAYAEGPGGRVPVLGLPGCVMYHKASIFDLIVPRLLAGVEVTAED VAALGHGGFCAGCPECAYPVCPFGK
Specific function: Unknown
COG id: COG0303
COG function: function code H; Molybdopterin biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36359; Mature: 36228
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELCMKVIHVHDAVGSVLCHDITRIVPGESKGPVFRKGHIVRPEDIKVLLETGKEHLYV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHCCCCEEEE FEPLAGMVHENDAAARIVAAVVGSNLVPGDPKEGRIDLVAACDGLLRVDVPALNRINGLG ECCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEECCCHHHHHCCCC EITMATLHGMQFVTKGRAVAGTRVVPLMIGEDKLRCLEAAVSRPVIEVLPLARARVGVVT HHHHHHHHHHHHHHCCCEEECCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEEEE TGSEVYYGRIRDAFGPVLRKKFAALGSSVMGQTLTSDEVSMTASAIADFLHQGADMIVVT CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE GGMSVDPDDRTPAAIRASGAQILCYGAPVYPGAMFLLAYAEGPGGRVPVLGLPGCVMYHK CCCEECCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHH ASIFDLIVPRLLAGVEVTAEDVAALGHGGFCAGCPECAYPVCPFGK HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure AELCMKVIHVHDAVGSVLCHDITRIVPGESKGPVFRKGHIVRPEDIKVLLETGKEHLYV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHCCCCEEEE FEPLAGMVHENDAAARIVAAVVGSNLVPGDPKEGRIDLVAACDGLLRVDVPALNRINGLG ECCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEECCCHHHHHCCCC EITMATLHGMQFVTKGRAVAGTRVVPLMIGEDKLRCLEAAVSRPVIEVLPLARARVGVVT HHHHHHHHHHHHHHCCCEEECCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEEEE TGSEVYYGRIRDAFGPVLRKKFAALGSSVMGQTLTSDEVSMTASAIADFLHQGADMIVVT CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE GGMSVDPDDRTPAAIRASGAQILCYGAPVYPGAMFLLAYAEGPGGRVPVLGLPGCVMYHK CCCEECCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHH ASIFDLIVPRLLAGVEVTAEDVAALGHGGFCAGCPECAYPVCPFGK HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA