| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905050
Identifier: 220905050
GI number: 220905050
Start: 2158687
End: 2161377
Strand: Direct
Name: 220905050
Synonym: Ddes_1787
Alternate gene names: NA
Gene position: 2158687-2161377 (Clockwise)
Preceding gene: 220905049
Following gene: 220905051
Centisome position: 75.13
GC content: 61.72
Gene sequence:
>2691_bases ATGACAGCACACAATGCCCACCCCCCGGCAGATATGAAACAAATTACCGCCGCATCTGGAGGTCCTGCATTCACATTTCG CCGCATGGCGGGCCTGGACCAGGCCCTGCTGGCCGAAGACGCCGAATGGCAGGGCCTCAAGCGCCTGGACCCGAAACTCT GGATGGCCATGAGCTGCCCCGTGCACGGGCTGGAATTTGATCCACAGACCCTGGCCCTTCTTGATGCCGACAATGACGGG CGCATACGGGCCAAAGAAATTCTGAACGCTGTGGACTGGGTATGCAGACGTGTGACCCGGCCTTCGCAACTCAGGCTGCG CCGCCCGGACCTCCCCCTGGACATTTTGCGCGATGACACGCCCGAAGGCACGGAACTGCTGGCAGCCGCCCGCCTTGTGC TGGAAAAAACCAAAGCTGAAAATACAAACAGCGTCAGCCGGGAGCAGGTCGCTACCGCCCTCAGCGCCGCCGCCGGATAC GCCTTCAACGGCGACGGCGTCATCCCCGCCGCCTCTGTGGACGGACAGGACGCAGCCGTGACTGCCTTTATCACCACTGG ACTCACCGTGGTGGGGGGCATGCGCGATGATTCGGGCGCGCCAGGCCTGGATGCGAAACTTGCCGCAACATTTCGTGAAA ATCTGCAAGCCATACGCCAGTGGCGGCACAAAACCCGTCAGGCAGACCTGCCCCTGGGCAAGGACACTGCCGAAGCATGG AGCCTGCTGCAGCGGCTTGGCCCCAAGCTGGATGATTACTTTGCCCGTTGTCGCATGGCGGCTTTTGCGCCGCAGGCTGT TGCCGCGCTTAACGAAGAAAGCGAACTGAACCCGCAGGACGCTGGCGGAGCGGAAATTTTTTCCATGGAAAATCTCGCCC GCCGTCCCCTTGCCAGAGTTGCCGCCGGGCGCGCCCTCAACCTGTCTGCGGGTATCAACCCCGCATGGGAAAAAGACCTG CGGGCCTTCCGCCGTCTGTTTGCCCCGCTGCTGCCGCCCCCCGCCGACACCGGCCAGGCACTTCAGATGGACGAGGACGG CTGGCACGCCATCCACGACCGTTTTGCGCCATATGCCGCGCTGCTGGCAGAAAAACCCGCCTTTGCCCGCGCGCCGGAAA ATGCCGGGCAGTTTGCTGCCCCCGGCCTTCCGGCTCTGGCCCTGGCCCCCGCCGACGATGCCCTGGGCAGGGCTTTTTTA CCCCTGAATCCCGAAGAGGTGGCCGACAGGCTCCCGGATGACGCCCTGGACGCCCTGCTGGCCCCTGCCACAGAAGAGGC TTTCGCCGCGTATGTAGCGCGTGATCTGGCCGCTCCGCGTATGGACGCCCTGCGCGACCTTGAAAAACTCATCCTGCTGC ATGCCAATCTGTATACCCTGCTCATGAACTTCGTTTCTTTTGCGGATTTTTACGAGCCGGGCAACAAGGCCATTTTCCTG GCCGGAACACTATATATAGACAGCCGCTCCTGCTCGCTCTGCGTGCATGTGGAGGATGTGGACGCGCATATGCGCCTTGC AGCCCAAAGCCACCTCTGCCTGCTCTATTGCCTGTGCAGCCGCAAGGATGAAAACGGGCAGGAGCAGACCACAACCATCG CCGCCGCCCTTACCGCCGGTACAGCGGACGATCTGGTCAAGGGCCGGCACGGCGTTTTTGTGGACAATGCAGGCCGCGTA TGGGACAGCACCCTGCTGCGCGTGGCGCGCAATCCCATCAGTCTGCGCGAGGCCATGTGGGCGCCCTATGTGCGTTTTGC CGCCCTGGTGGGCGAACAGCTGCAAAAACTGGTGTCCACCAAGGATGCCGCCATCGCCAATGCGTCCTCAAAAATGGCAG GTTCGCTGACTGACGGCAAGGTTGAACCGGCCAAAGCCACAGCAGCCAAACAGCCTTTCGACATTGCCAAAAGTGCGGGC ATCTTCGCCGCCGTCAGCGTTGGCATAAGCATGGTCAGCGCATCTTTTACCTATATTGCCAAATCGCTGTTTTCTCTTGG CTGGTGGTGGCCCATGGCCCTTTTTGTTATATTTGCCGTCATTTCAGGCCCTTCTATGATCATGGCCTGGTTCAAGCTGC GCAGGCGCAGCCTGGGGCCGCTGCTGGATGCTTCGGGCTGGGCCGTCAACACGGGTGCTCCCATCAACCTCACCATGGGA AAAACCCTCACGGCTGTGGGCGAAATGCCCCCCGACGCCCAACGCTCGCTCGATGATCCCTACGGCCTGCCCGCTCGCCT TGGGCACCCTGCCGCACGCAAATTTCTTGTGGCTGTACTCGCAGTGCTGCTTCTGACGGCTGCTGGCATTGGCGGCTACT GGGCCTGGCGCGGCGAACTGCCGTTCGGTATTATCCTTGGGCAGCAGGAAACCGGAATGCCCAAAGCCGGAGCAGACAGC GGCAAACAAAACGGGCAACCGGCCAGGACCAGCCAATCCGGTCAGGCCGGGCAAGATACTGTAAAAACGCCGCCCGCATC GGCAAGCCCCTCCCCCGAAGCGGAAAAAGATAAAAAACAGAGCCACGGTCAGGCTCCTGCCGCAGAGACCGAAAAAAACT CCGGCACAAGCGGGCAGCCACAGCCCGCAGCCAAACAGACCGGGGGGCCGCTTTCAGAGCTTGAAGCACTTTTACCGGGC AGGCCCGCTTCCGCTACAGCGCCGCAACCACCGGAAACACAAAGCAAATAA
Upstream 100 bases:
>100_bases GGCAGCCCGCACACGTTAAACCCGGCTCATCGGCCGTAGCGTAGCGTGCCGCGCGCAACATATCCGGAAAGCTGAATTTC CTACTCCAAGGGATGACCTG
Downstream 100 bases:
>100_bases GGCCCACATGCACAATAAAAATTCCTGCAAAACCTTTGCGCCCGCAGCTTCCGGACAGAACATCCCCCGGAAACAGACCG GGTGCGACAGCAAGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 896; Mature: 895
Protein sequence:
>896_residues MTAHNAHPPADMKQITAASGGPAFTFRRMAGLDQALLAEDAEWQGLKRLDPKLWMAMSCPVHGLEFDPQTLALLDADNDG RIRAKEILNAVDWVCRRVTRPSQLRLRRPDLPLDILRDDTPEGTELLAAARLVLEKTKAENTNSVSREQVATALSAAAGY AFNGDGVIPAASVDGQDAAVTAFITTGLTVVGGMRDDSGAPGLDAKLAATFRENLQAIRQWRHKTRQADLPLGKDTAEAW SLLQRLGPKLDDYFARCRMAAFAPQAVAALNEESELNPQDAGGAEIFSMENLARRPLARVAAGRALNLSAGINPAWEKDL RAFRRLFAPLLPPPADTGQALQMDEDGWHAIHDRFAPYAALLAEKPAFARAPENAGQFAAPGLPALALAPADDALGRAFL PLNPEEVADRLPDDALDALLAPATEEAFAAYVARDLAAPRMDALRDLEKLILLHANLYTLLMNFVSFADFYEPGNKAIFL AGTLYIDSRSCSLCVHVEDVDAHMRLAAQSHLCLLYCLCSRKDENGQEQTTTIAAALTAGTADDLVKGRHGVFVDNAGRV WDSTLLRVARNPISLREAMWAPYVRFAALVGEQLQKLVSTKDAAIANASSKMAGSLTDGKVEPAKATAAKQPFDIAKSAG IFAAVSVGISMVSASFTYIAKSLFSLGWWWPMALFVIFAVISGPSMIMAWFKLRRRSLGPLLDASGWAVNTGAPINLTMG KTLTAVGEMPPDAQRSLDDPYGLPARLGHPAARKFLVAVLAVLLLTAAGIGGYWAWRGELPFGIILGQQETGMPKAGADS GKQNGQPARTSQSGQAGQDTVKTPPASASPSPEAEKDKKQSHGQAPAAETEKNSGTSGQPQPAAKQTGGPLSELEALLPG RPASATAPQPPETQSK
Sequences:
>Translated_896_residues MTAHNAHPPADMKQITAASGGPAFTFRRMAGLDQALLAEDAEWQGLKRLDPKLWMAMSCPVHGLEFDPQTLALLDADNDG RIRAKEILNAVDWVCRRVTRPSQLRLRRPDLPLDILRDDTPEGTELLAAARLVLEKTKAENTNSVSREQVATALSAAAGY AFNGDGVIPAASVDGQDAAVTAFITTGLTVVGGMRDDSGAPGLDAKLAATFRENLQAIRQWRHKTRQADLPLGKDTAEAW SLLQRLGPKLDDYFARCRMAAFAPQAVAALNEESELNPQDAGGAEIFSMENLARRPLARVAAGRALNLSAGINPAWEKDL RAFRRLFAPLLPPPADTGQALQMDEDGWHAIHDRFAPYAALLAEKPAFARAPENAGQFAAPGLPALALAPADDALGRAFL PLNPEEVADRLPDDALDALLAPATEEAFAAYVARDLAAPRMDALRDLEKLILLHANLYTLLMNFVSFADFYEPGNKAIFL AGTLYIDSRSCSLCVHVEDVDAHMRLAAQSHLCLLYCLCSRKDENGQEQTTTIAAALTAGTADDLVKGRHGVFVDNAGRV WDSTLLRVARNPISLREAMWAPYVRFAALVGEQLQKLVSTKDAAIANASSKMAGSLTDGKVEPAKATAAKQPFDIAKSAG IFAAVSVGISMVSASFTYIAKSLFSLGWWWPMALFVIFAVISGPSMIMAWFKLRRRSLGPLLDASGWAVNTGAPINLTMG KTLTAVGEMPPDAQRSLDDPYGLPARLGHPAARKFLVAVLAVLLLTAAGIGGYWAWRGELPFGIILGQQETGMPKAGADS GKQNGQPARTSQSGQAGQDTVKTPPASASPSPEAEKDKKQSHGQAPAAETEKNSGTSGQPQPAAKQTGGPLSELEALLPG RPASATAPQPPETQSK >Mature_895_residues TAHNAHPPADMKQITAASGGPAFTFRRMAGLDQALLAEDAEWQGLKRLDPKLWMAMSCPVHGLEFDPQTLALLDADNDGR IRAKEILNAVDWVCRRVTRPSQLRLRRPDLPLDILRDDTPEGTELLAAARLVLEKTKAENTNSVSREQVATALSAAAGYA FNGDGVIPAASVDGQDAAVTAFITTGLTVVGGMRDDSGAPGLDAKLAATFRENLQAIRQWRHKTRQADLPLGKDTAEAWS LLQRLGPKLDDYFARCRMAAFAPQAVAALNEESELNPQDAGGAEIFSMENLARRPLARVAAGRALNLSAGINPAWEKDLR AFRRLFAPLLPPPADTGQALQMDEDGWHAIHDRFAPYAALLAEKPAFARAPENAGQFAAPGLPALALAPADDALGRAFLP LNPEEVADRLPDDALDALLAPATEEAFAAYVARDLAAPRMDALRDLEKLILLHANLYTLLMNFVSFADFYEPGNKAIFLA GTLYIDSRSCSLCVHVEDVDAHMRLAAQSHLCLLYCLCSRKDENGQEQTTTIAAALTAGTADDLVKGRHGVFVDNAGRVW DSTLLRVARNPISLREAMWAPYVRFAALVGEQLQKLVSTKDAAIANASSKMAGSLTDGKVEPAKATAAKQPFDIAKSAGI FAAVSVGISMVSASFTYIAKSLFSLGWWWPMALFVIFAVISGPSMIMAWFKLRRRSLGPLLDASGWAVNTGAPINLTMGK TLTAVGEMPPDAQRSLDDPYGLPARLGHPAARKFLVAVLAVLLLTAAGIGGYWAWRGELPFGIILGQQETGMPKAGADSG KQNGQPARTSQSGQAGQDTVKTPPASASPSPEAEKDKKQSHGQAPAAETEKNSGTSGQPQPAAKQTGGPLSELEALLPGR PASATAPQPPETQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95600; Mature: 95468
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHNAHPPADMKQITAASGGPAFTFRRMAGLDQALLAEDAEWQGLKRLDPKLWMAMSCP CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCHHHCCHHHEEEECCC VHGLEFDPQTLALLDADNDGRIRAKEILNAVDWVCRRVTRPSQLRLRRPDLPLDILRDDT CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHCCCC PEGTELLAAARLVLEKTKAENTNSVSREQVATALSAAAGYAFNGDGVIPAASVDGQDAAV CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCEE TAFITTGLTVVGGMRDDSGAPGLDAKLAATFRENLQAIRQWRHKTRQADLPLGKDTAEAW HHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SLLQRLGPKLDDYFARCRMAAFAPQAVAALNEESELNPQDAGGAEIFSMENLARRPLARV HHHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH AAGRALNLSAGINPAWEKDLRAFRRLFAPLLPPPADTGQALQMDEDGWHAIHDRFAPYAA HCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH LLAEKPAFARAPENAGQFAAPGLPALALAPADDALGRAFLPLNPEEVADRLPDDALDALL HHHCCCCHHCCCCCCCCCCCCCCCEEEECCCCHHHCCEECCCCHHHHHHHCCHHHHHHHH APATEEAFAAYVARDLAAPRMDALRDLEKLILLHANLYTLLMNFVSFADFYEPGNKAIFL CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AGTLYIDSRSCSLCVHVEDVDAHMRLAAQSHLCLLYCLCSRKDENGQEQTTTIAAALTAG EEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC TADDLVKGRHGVFVDNAGRVWDSTLLRVARNPISLREAMWAPYVRFAALVGEQLQKLVST CHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDAAIANASSKMAGSLTDGKVEPAKATAAKQPFDIAKSAGIFAAVSVGISMVSASFTYIA HHHHHHCCCHHHCCCCCCCCCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH KSLFSLGWWWPMALFVIFAVISGPSMIMAWFKLRRRSLGPLLDASGWAVNTGAPINLTMG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECC KTLTAVGEMPPDAQRSLDDPYGLPARLGHPAARKFLVAVLAVLLLTAAGIGGYWAWRGEL CHHHHHCCCCCCHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC PFGIILGQQETGMPKAGADSGKQNGQPARTSQSGQAGQDTVKTPPASASPSPEAEKDKKQ CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SHGQAPAAETEKNSGTSGQPQPAAKQTGGPLSELEALLPGRPASATAPQPPETQSK HCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAHNAHPPADMKQITAASGGPAFTFRRMAGLDQALLAEDAEWQGLKRLDPKLWMAMSCP CCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCHHHCCHHHEEEECCC VHGLEFDPQTLALLDADNDGRIRAKEILNAVDWVCRRVTRPSQLRLRRPDLPLDILRDDT CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHCCCC PEGTELLAAARLVLEKTKAENTNSVSREQVATALSAAAGYAFNGDGVIPAASVDGQDAAV CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCEE TAFITTGLTVVGGMRDDSGAPGLDAKLAATFRENLQAIRQWRHKTRQADLPLGKDTAEAW HHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SLLQRLGPKLDDYFARCRMAAFAPQAVAALNEESELNPQDAGGAEIFSMENLARRPLARV HHHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH AAGRALNLSAGINPAWEKDLRAFRRLFAPLLPPPADTGQALQMDEDGWHAIHDRFAPYAA HCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH LLAEKPAFARAPENAGQFAAPGLPALALAPADDALGRAFLPLNPEEVADRLPDDALDALL HHHCCCCHHCCCCCCCCCCCCCCCEEEECCCCHHHCCEECCCCHHHHHHHCCHHHHHHHH APATEEAFAAYVARDLAAPRMDALRDLEKLILLHANLYTLLMNFVSFADFYEPGNKAIFL CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AGTLYIDSRSCSLCVHVEDVDAHMRLAAQSHLCLLYCLCSRKDENGQEQTTTIAAALTAG EEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC TADDLVKGRHGVFVDNAGRVWDSTLLRVARNPISLREAMWAPYVRFAALVGEQLQKLVST CHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDAAIANASSKMAGSLTDGKVEPAKATAAKQPFDIAKSAGIFAAVSVGISMVSASFTYIA HHHHHHCCCHHHCCCCCCCCCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH KSLFSLGWWWPMALFVIFAVISGPSMIMAWFKLRRRSLGPLLDASGWAVNTGAPINLTMG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECC KTLTAVGEMPPDAQRSLDDPYGLPARLGHPAARKFLVAVLAVLLLTAAGIGGYWAWRGEL CHHHHHCCCCCCHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC PFGIILGQQETGMPKAGADSGKQNGQPARTSQSGQAGQDTVKTPPASASPSPEAEKDKKQ CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SHGQAPAAETEKNSGTSGQPQPAAKQTGGPLSELEALLPGRPASATAPQPPETQSK HCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA