| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is ctpC [H]
Identifier: 220905016
GI number: 220905016
Start: 2118437
End: 2120593
Strand: Direct
Name: ctpC [H]
Synonym: Ddes_1752
Alternate gene names: 220905016
Gene position: 2118437-2120593 (Clockwise)
Preceding gene: 220905015
Following gene: 220905017
Centisome position: 73.72
GC content: 61.85
Gene sequence:
>2157_bases ATGCGTTTTTATATTGTCCATGAATTACGTGGCCTAGCCACGCCCGATTCCGGCAGAATGCGCGTGCGCGCCTCTTGCCC CCTCAACCTTGCGCAGGCCGAAGCACTGGCAGGCGCCCTGGCTACCCTGCCCGGCATCATTGTGGCGCGCGTTACGCCGC GCCTGGGCAGCCTGCTGTTTTTCTATGAAGACCAGCAGAGCCGCGAAAGCGCCCTGACCCTGCTTGTAGGCGCAAGCGAC GAACAGGGACCCCTGACCCATATGGCCGCAACTGCCGATGACGGCACGCCCGGCCCCGGGGAGGCCACACTTACCGAAGG CCTTATGCCGGTCTTTCAGTACGTTTTTGTGCGGCCCCTGCTGCCCATGGCCCTGCGCATCGTCAACAGCGTGGTCAGCG CTGTGCCTTTTCTTTTCAAGGGCATACAGGCCGTCCTGTGTGGAGCGCTCAACGTGGATGTGCTTGACGCGGCGGCCATT GGCGCGTCGCTCATCATGCGCGACTTCCGCACGGTGAGCCTGCTCACCCTTCTGCTTGGCCTGGGCGAAACCCTCGAATA CTGGACCCGCCGCCGCTCCATGGCCACACTGACCGAAAGTCTTGCCCTTAATGTGGAAAACGTCTGGCTGCTTGTTGATG GAACGGAAGTATCCGTTCCCCTTGCCCAGGTAAAAGAAGACGACCTTGTGGTTGTGCGCGACGGCGGCAGCATCCCCGTG GACGGCGTGGTGGAAGAAGGCTGCGCGGTAGTCAACCAGTCCTCCATGACAGGGGAGCCGCTCGGCGTCAGAAGGACGAT GGGAGCGTCTGTTTTCGCAGGCACCGTGGTGGAGGAAGGTCGCCTTGTCATCCGCGCCAAGCATGTGGGCGATGGTACGC GCTTGCGTCAGGTTGTCAAATTTATTGAAGAATCAGAAACGCTCAAGGCGGGCATACAGGGCAAATACGAACGTCTGGCA GACATGGCCGTACCCTTTACCTTTGGTCTGGCCGCCGTGGTCTGGCTGCTCACGCGGGACTTTCGCCGTGCGGCCTCGGT GCTGCTTGTGGATTACTCCTGCGCGCTCAAGCTGGCCACACCGCTGGCGGTGCTGGCATCCATGCGCGAAGGCGCGCGCC ACGGCATGGCCATCAAGGGCGGACGATACCTTGAAGCCCTCAATGAGGCCGACACCGTCGTCTTTGACAAAACCGGCACG CTTACCCAGGCCAGCCCCAAGGTTGTGGAAGTTTTCCCCGCCCCGGGCTTTGACCGCACCGAGGTTCTGCGCGTCATGGC CTGCCTTGAAGAGCATTTTCCCCATCCTGTGGCGCGCGCCGTGGTGCGCAAGGCCGATGAGGAAGGGCTTAAACACGAAG AAGAACACGCCCATGTGGAATATCTTGTGGCGCACGGTGTGGCCTCTTCCCTTTATGGCAAAAAAATGCGCGTGGGCAGC CGCCACTACATCGAGCACGACGAAGGCGTTGACCTCTCCCCCCTGCAGCATGTCGTAGAAGAGCAGGCGGCCATGGGGCG CTCGCTGCTTTTCATGAGCGAAGACGGCAAGCTCGCCGGCATGGTCTCCATTGAAGATCCCCTGCGTCCGGAAGCCGCGC GCGTGGTGGAAGAGCTTCGTGGCCTGGGCTTCGGGCGCATACTCATGCTCACCGGAGACGATGAGCGCACCGCACGTGCC GTGGCCGGCAGTGTCGGCATCAGCGAGTACCGTGCCCAGGTGCTGCCCGCAGACAAGGCCCGCATTGTACAGGACCTCAC CGACCAGGGCTGCAAGGTGCTCATGGTAGGCGATGGCATCAACGACGCCCCGGCCCTTTCAGCGTCACATGTGGGCGTTG CCATGAGCGACGGCACCGATCTGGCCCGCGAGGTAGCCAACGTGCTGCTGACCCATCCCAGCCTTGAAGGGCTTGTCAGT GCCCGTTTGCTGGGCAGGCGCACCCTGCGCCGCATACACTTCAACTTTGTATCCACGCTGGCGCTCAACAGCGCATTTCT TGTGGGCGGGCTTTTCATGATCATCGGCCCCGGCGTTTCGGCCCTGCTGCACAATGTGACGACTCTGGGCGTAGCGCTCA ACGCCATGCGCCCGCATTTGCCTAAAAAGGCCCTTCCGGGCGAGGAGAGCCATTTTGAACACCCTGCATCTTCTTAG
Upstream 100 bases:
>100_bases GCCTGTCCGGCTCCCTTCAGGCGATACCGCCCCTTCTCCGGGCGATGGCCCACATCCCGCAGTTTACAGCCTTTGCTTTA TGTATGGAACAGGAGCGCAC
Downstream 100 bases:
>100_bases ATATGTACGCAGTTTTGTGGACGGAAGAGTGCGCATACGCCACCCCGCCCTCCGCAACGGATCCGTGGCTGCACTTGCTG AAACCCGCCTGAAAGCCATT
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MRFYIVHELRGLATPDSGRMRVRASCPLNLAQAEALAGALATLPGIIVARVTPRLGSLLFFYEDQQSRESALTLLVGASD EQGPLTHMAATADDGTPGPGEATLTEGLMPVFQYVFVRPLLPMALRIVNSVVSAVPFLFKGIQAVLCGALNVDVLDAAAI GASLIMRDFRTVSLLTLLLGLGETLEYWTRRRSMATLTESLALNVENVWLLVDGTEVSVPLAQVKEDDLVVVRDGGSIPV DGVVEEGCAVVNQSSMTGEPLGVRRTMGASVFAGTVVEEGRLVIRAKHVGDGTRLRQVVKFIEESETLKAGIQGKYERLA DMAVPFTFGLAAVVWLLTRDFRRAASVLLVDYSCALKLATPLAVLASMREGARHGMAIKGGRYLEALNEADTVVFDKTGT LTQASPKVVEVFPAPGFDRTEVLRVMACLEEHFPHPVARAVVRKADEEGLKHEEEHAHVEYLVAHGVASSLYGKKMRVGS RHYIEHDEGVDLSPLQHVVEEQAAMGRSLLFMSEDGKLAGMVSIEDPLRPEAARVVEELRGLGFGRILMLTGDDERTARA VAGSVGISEYRAQVLPADKARIVQDLTDQGCKVLMVGDGINDAPALSASHVGVAMSDGTDLAREVANVLLTHPSLEGLVS ARLLGRRTLRRIHFNFVSTLALNSAFLVGGLFMIIGPGVSALLHNVTTLGVALNAMRPHLPKKALPGEESHFEHPASS
Sequences:
>Translated_718_residues MRFYIVHELRGLATPDSGRMRVRASCPLNLAQAEALAGALATLPGIIVARVTPRLGSLLFFYEDQQSRESALTLLVGASD EQGPLTHMAATADDGTPGPGEATLTEGLMPVFQYVFVRPLLPMALRIVNSVVSAVPFLFKGIQAVLCGALNVDVLDAAAI GASLIMRDFRTVSLLTLLLGLGETLEYWTRRRSMATLTESLALNVENVWLLVDGTEVSVPLAQVKEDDLVVVRDGGSIPV DGVVEEGCAVVNQSSMTGEPLGVRRTMGASVFAGTVVEEGRLVIRAKHVGDGTRLRQVVKFIEESETLKAGIQGKYERLA DMAVPFTFGLAAVVWLLTRDFRRAASVLLVDYSCALKLATPLAVLASMREGARHGMAIKGGRYLEALNEADTVVFDKTGT LTQASPKVVEVFPAPGFDRTEVLRVMACLEEHFPHPVARAVVRKADEEGLKHEEEHAHVEYLVAHGVASSLYGKKMRVGS RHYIEHDEGVDLSPLQHVVEEQAAMGRSLLFMSEDGKLAGMVSIEDPLRPEAARVVEELRGLGFGRILMLTGDDERTARA VAGSVGISEYRAQVLPADKARIVQDLTDQGCKVLMVGDGINDAPALSASHVGVAMSDGTDLAREVANVLLTHPSLEGLVS ARLLGRRTLRRIHFNFVSTLALNSAFLVGGLFMIIGPGVSALLHNVTTLGVALNAMRPHLPKKALPGEESHFEHPASS >Mature_718_residues MRFYIVHELRGLATPDSGRMRVRASCPLNLAQAEALAGALATLPGIIVARVTPRLGSLLFFYEDQQSRESALTLLVGASD EQGPLTHMAATADDGTPGPGEATLTEGLMPVFQYVFVRPLLPMALRIVNSVVSAVPFLFKGIQAVLCGALNVDVLDAAAI GASLIMRDFRTVSLLTLLLGLGETLEYWTRRRSMATLTESLALNVENVWLLVDGTEVSVPLAQVKEDDLVVVRDGGSIPV DGVVEEGCAVVNQSSMTGEPLGVRRTMGASVFAGTVVEEGRLVIRAKHVGDGTRLRQVVKFIEESETLKAGIQGKYERLA DMAVPFTFGLAAVVWLLTRDFRRAASVLLVDYSCALKLATPLAVLASMREGARHGMAIKGGRYLEALNEADTVVFDKTGT LTQASPKVVEVFPAPGFDRTEVLRVMACLEEHFPHPVARAVVRKADEEGLKHEEEHAHVEYLVAHGVASSLYGKKMRVGS RHYIEHDEGVDLSPLQHVVEEQAAMGRSLLFMSEDGKLAGMVSIEDPLRPEAARVVEELRGLGFGRILMLTGDDERTARA VAGSVGISEYRAQVLPADKARIVQDLTDQGCKVLMVGDGINDAPALSASHVGVAMSDGTDLAREVANVLLTHPSLEGLVS ARLLGRRTLRRIHFNFVSTLALNSAFLVGGLFMIIGPGVSALLHNVTTLGVALNAMRPHLPKKALPGEESHFEHPASS
Specific function: Involved In Copper Efflux. [C]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=588, Percent_Identity=32.312925170068, Blast_Score=266, Evalue=5e-71, Organism=Homo sapiens, GI115529486, Length=607, Percent_Identity=30.6425041186161, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI55743073, Length=505, Percent_Identity=33.8613861386139, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI118498343, Length=550, Percent_Identity=25.2727272727273, Blast_Score=93, Evalue=9e-19, Organism=Homo sapiens, GI48762691, Length=194, Percent_Identity=32.4742268041237, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI48762685, Length=194, Percent_Identity=32.4742268041237, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI48762687, Length=194, Percent_Identity=32.4742268041237, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI48762689, Length=194, Percent_Identity=32.4742268041237, Blast_Score=72, Evalue=3e-12, Organism=Escherichia coli, GI1786691, Length=506, Percent_Identity=33.399209486166, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1789879, Length=597, Percent_Identity=30.9882747068677, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI1786914, Length=453, Percent_Identity=28.0353200883002, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI2367363, Length=236, Percent_Identity=27.1186440677966, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17556548, Length=309, Percent_Identity=31.3915857605178, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17554158, Length=240, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71988506, Length=240, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193210130, Length=240, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320475, Length=503, Percent_Identity=31.4115308151093, Blast_Score=217, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6319772, Length=540, Percent_Identity=25.5555555555556, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6321430, Length=639, Percent_Identity=25.1956181533646, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6325221, Length=584, Percent_Identity=23.2876712328767, Blast_Score=110, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6321271, Length=175, Percent_Identity=30.8571428571429, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321432, Length=172, Percent_Identity=31.9767441860465, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI221329854, Length=367, Percent_Identity=28.3378746594005, Blast_Score=133, Evalue=6e-31, Organism=Drosophila melanogaster, GI24668704, Length=182, Percent_Identity=31.8681318681319, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI281366617, Length=182, Percent_Identity=31.8681318681319, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24668708, Length=182, Percent_Identity=31.8681318681319, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24668696, Length=182, Percent_Identity=31.8681318681319, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI161085803, Length=182, Percent_Identity=31.8681318681319, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24762455, Length=238, Percent_Identity=26.890756302521, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762453, Length=238, Percent_Identity=26.890756302521, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762447, Length=238, Percent_Identity=26.890756302521, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762457, Length=238, Percent_Identity=26.890756302521, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762449, Length=238, Percent_Identity=26.890756302521, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762445, Length=238, Percent_Identity=26.890756302521, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762451, Length=238, Percent_Identity=26.890756302521, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI17136664, Length=238, Percent_Identity=27.3109243697479, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 77176; Mature: 77176
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYIVHELRGLATPDSGRMRVRASCPLNLAQAEALAGALATLPGIIVARVTPRLGSLLF CEEEEEEHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEE FYEDQQSRESALTLLVGASDEQGPLTHMAATADDGTPGPGEATLTEGLMPVFQYVFVRPL EECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPMALRIVNSVVSAVPFLFKGIQAVLCGALNVDVLDAAAIGASLIMRDFRTVSLLTLLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGETLEYWTRRRSMATLTESLALNVENVWLLVDGTEVSVPLAQVKEDDLVVVRDGGSIPV CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCHHHCCCCCEEEEECCCCCCC DGVVEEGCAVVNQSSMTGEPLGVRRTMGASVFAGTVVEEGRLVIRAKHVGDGTRLRQVVK CHHHHHCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHHHH FIEESETLKAGIQGKYERLADMAVPFTFGLAAVVWLLTRDFRRAASVLLVDYSCALKLAT HHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHH PLAVLASMREGARHGMAIKGGRYLEALNEADTVVFDKTGTLTQASPKVVEVFPAPGFDRT HHHHHHHHHHHHHCCCEECCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCHH EVLRVMACLEEHFPHPVARAVVRKADEEGLKHEEEHAHVEYLVAHGVASSLYGKKMRVGS HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCC RHYIEHDEGVDLSPLQHVVEEQAAMGRSLLFMSEDGKLAGMVSIEDPLRPEAARVVEELR CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHH GLGFGRILMLTGDDERTARAVAGSVGISEYRAQVLPADKARIVQDLTDQGCKVLMVGDGI CCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCC NDAPALSASHVGVAMSDGTDLAREVANVLLTHPSLEGLVSARLLGRRTLRRIHFNFVSTL CCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALNSAFLVGGLFMIIGPGVSALLHNVTTLGVALNAMRPHLPKKALPGEESHFEHPASS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFYIVHELRGLATPDSGRMRVRASCPLNLAQAEALAGALATLPGIIVARVTPRLGSLLF CEEEEEEHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEE FYEDQQSRESALTLLVGASDEQGPLTHMAATADDGTPGPGEATLTEGLMPVFQYVFVRPL EECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPMALRIVNSVVSAVPFLFKGIQAVLCGALNVDVLDAAAIGASLIMRDFRTVSLLTLLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGETLEYWTRRRSMATLTESLALNVENVWLLVDGTEVSVPLAQVKEDDLVVVRDGGSIPV CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCHHHCCCCCEEEEECCCCCCC DGVVEEGCAVVNQSSMTGEPLGVRRTMGASVFAGTVVEEGRLVIRAKHVGDGTRLRQVVK CHHHHHCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHHHH FIEESETLKAGIQGKYERLADMAVPFTFGLAAVVWLLTRDFRRAASVLLVDYSCALKLAT HHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHH PLAVLASMREGARHGMAIKGGRYLEALNEADTVVFDKTGTLTQASPKVVEVFPAPGFDRT HHHHHHHHHHHHHCCCEECCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCHH EVLRVMACLEEHFPHPVARAVVRKADEEGLKHEEEHAHVEYLVAHGVASSLYGKKMRVGS HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCC RHYIEHDEGVDLSPLQHVVEEQAAMGRSLLFMSEDGKLAGMVSIEDPLRPEAARVVEELR CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHH GLGFGRILMLTGDDERTARAVAGSVGISEYRAQVLPADKARIVQDLTDQGCKVLMVGDGI CCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCC NDAPALSASHVGVAMSDGTDLAREVANVLLTHPSLEGLVSARLLGRRTLRRIHFNFVSTL CCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALNSAFLVGGLFMIIGPGVSALLHNVTTLGVALNAMRPHLPKKALPGEESHFEHPASS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]