| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904992
Identifier: 220904992
GI number: 220904992
Start: 2090803
End: 2092248
Strand: Reverse
Name: 220904992
Synonym: Ddes_1728
Alternate gene names: NA
Gene position: 2092248-2090803 (Counterclockwise)
Preceding gene: 220904993
Following gene: 220904991
Centisome position: 72.81
GC content: 61.41
Gene sequence:
>1446_bases ATGAGTGAGCATGACAGCCTGCTGCGCAGGCCTTGCGACAGTTCCCCGCCGGAGGGTGACCTTTCACGCCGGGCCGCACT GGCCATGAAAAAGGCCAGAACAGCTCTGGTGCTTGACCACCCGTTTTTCGGCTCTCTGGCATTGCGGCTGCGCCTCAGGG AAGATGCAACCTGCGGCGACATGTGGACAGACGGCAAGAACCTCGGCTTTAATCCCGCCTATGCCGCCACCCTGCCTGAA GCCCGGCTGGTGGCGGCTCAGGCGCATGAGATCATGCATCTGGCTTTCGGTCATCATCTGCGCCGCAAGGGGCGCGAAGA AAAAATGTGGAATCGGGCCTGCGATCTGGCCATAAACCACATCCTGCTCGAATCCGGCTTTGATCTGCCCGAAGGCTTTG CCCACGATCCGGCATATGCGGGCATGTCGGCCGACGATATTTATGAAGCGCTGGCTGTTCTTCAGGAAAGTGCCTCCAGA GGCGATGCGCGCGGGGATGCTGCCCGGGGCGACGGGCAGGATCAGGAAGGCGCGGGAGCCATGTCTTTTGACGGCGGCAA GGAATTAGGCGGAAAAAGCGCCGCCAGGGCAGGCGGCGGACAAAAGGACAAAAGCGGGCAGGAGCAGGACAAACAGGGGG CATCAGGTGCAACGCCCACCGCGAACAAGGACAGGGGCATCCCGATGCAGGGCGAGGGCAAGACCTCCTTTACCGGAGAG GTGCGCGATCACCCCGACGTGAGCGGGCTGGAAAACGATCAGGCCCTCAAGCTGGCTGAGCAGGAGGCGGATGTGGCCCT GAATCAGGCCGTGCAGCGGGCGCGGCATATGGGCAGCCTGCCTGCGGGGCTGACGCGTCTGCTCCGCAAGGAATGGCAGC CAGAACTGGACTGGCGCGATCTGCTGCGCCGTTTTCTGGAGCATTGCGCCAACAGCGACTACTCCTGGTCCACACCCAAC AGGCGTTACCTGTACCAGAACATTTACCTGCCCGCCCGCCGTGAGGCCCGCCTGCCGCATGTGGTTCTGGCTGTGGACTG TTCCGGCTCGGTGGATGAAAAGGTGCTGTCCATATTCTGCACGGAACTTTTTTCAGTGCTGGATGCCTATGACACCACGC TGACCGTATTGTTTCACGATACAAAAATTCAGGGCGAAATAACCTTTAACCGCATGAGCATGCCGACCGACCTTATGCCC GTGGGCGGCGGCGGTACCGACTACCGCCCGGTCTGCGCCCATATTGCGGATCAAAACCTGCATCCCACCTGCCTCATCTG GTTTACAGACCTCGAGTGCAACCGCTTCCCCCATGAGCCGGACTACCCGGTGTTGTGGGTATGCAGTGAGCCAGATGCGG AGCAGCCGCCGTTTGGGGAACTTGTGAGCCTGATGGCCGGACCGGCACAGACATGGCCGCCCACGCCTGCGGCCCAACAT CGATGA
Upstream 100 bases:
>100_bases TTTTGCTCATGCGTGACGCCGTGTGCCAAGACACGGAGCTTGTGCGCACCGAGGCTTTCTCCCGCTGGGCGGAAAAAAAC GCTGAAGTGCTGATGTAGCC
Downstream 100 bases:
>100_bases AGAACCAGCGGAGCAGTTATGCGTATAGAATGGAAGATCACAAAAAAAAGAGGAAACCTGCGGCCGGTTCTCAGTTACTG CGCACAGCTTGAAGACCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSEHDSLLRRPCDSSPPEGDLSRRAALAMKKARTALVLDHPFFGSLALRLRLREDATCGDMWTDGKNLGFNPAYAATLPE ARLVAAQAHEIMHLAFGHHLRRKGREEKMWNRACDLAINHILLESGFDLPEGFAHDPAYAGMSADDIYEALAVLQESASR GDARGDAARGDGQDQEGAGAMSFDGGKELGGKSAARAGGGQKDKSGQEQDKQGASGATPTANKDRGIPMQGEGKTSFTGE VRDHPDVSGLENDQALKLAEQEADVALNQAVQRARHMGSLPAGLTRLLRKEWQPELDWRDLLRRFLEHCANSDYSWSTPN RRYLYQNIYLPARREARLPHVVLAVDCSGSVDEKVLSIFCTELFSVLDAYDTTLTVLFHDTKIQGEITFNRMSMPTDLMP VGGGGTDYRPVCAHIADQNLHPTCLIWFTDLECNRFPHEPDYPVLWVCSEPDAEQPPFGELVSLMAGPAQTWPPTPAAQH R
Sequences:
>Translated_481_residues MSEHDSLLRRPCDSSPPEGDLSRRAALAMKKARTALVLDHPFFGSLALRLRLREDATCGDMWTDGKNLGFNPAYAATLPE ARLVAAQAHEIMHLAFGHHLRRKGREEKMWNRACDLAINHILLESGFDLPEGFAHDPAYAGMSADDIYEALAVLQESASR GDARGDAARGDGQDQEGAGAMSFDGGKELGGKSAARAGGGQKDKSGQEQDKQGASGATPTANKDRGIPMQGEGKTSFTGE VRDHPDVSGLENDQALKLAEQEADVALNQAVQRARHMGSLPAGLTRLLRKEWQPELDWRDLLRRFLEHCANSDYSWSTPN RRYLYQNIYLPARREARLPHVVLAVDCSGSVDEKVLSIFCTELFSVLDAYDTTLTVLFHDTKIQGEITFNRMSMPTDLMP VGGGGTDYRPVCAHIADQNLHPTCLIWFTDLECNRFPHEPDYPVLWVCSEPDAEQPPFGELVSLMAGPAQTWPPTPAAQH R >Mature_480_residues SEHDSLLRRPCDSSPPEGDLSRRAALAMKKARTALVLDHPFFGSLALRLRLREDATCGDMWTDGKNLGFNPAYAATLPEA RLVAAQAHEIMHLAFGHHLRRKGREEKMWNRACDLAINHILLESGFDLPEGFAHDPAYAGMSADDIYEALAVLQESASRG DARGDAARGDGQDQEGAGAMSFDGGKELGGKSAARAGGGQKDKSGQEQDKQGASGATPTANKDRGIPMQGEGKTSFTGEV RDHPDVSGLENDQALKLAEQEADVALNQAVQRARHMGSLPAGLTRLLRKEWQPELDWRDLLRRFLEHCANSDYSWSTPNR RYLYQNIYLPARREARLPHVVLAVDCSGSVDEKVLSIFCTELFSVLDAYDTTLTVLFHDTKIQGEITFNRMSMPTDLMPV GGGGTDYRPVCAHIADQNLHPTCLIWFTDLECNRFPHEPDYPVLWVCSEPDAEQPPFGELVSLMAGPAQTWPPTPAAQHR
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 52955; Mature: 52824
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHDSLLRRPCDSSPPEGDLSRRAALAMKKARTALVLDHPFFGSLALRLRLREDATCGD CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCEEEEEEECCCCCCCC MWTDGKNLGFNPAYAATLPEARLVAAQAHEIMHLAFGHHLRRKGREEKMWNRACDLAINH CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILLESGFDLPEGFAHDPAYAGMSADDIYEALAVLQESASRGDARGDAARGDGQDQEGAGA HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC MSFDGGKELGGKSAARAGGGQKDKSGQEQDKQGASGATPTANKDRGIPMQGEGKTSFTGE CCCCCCHHCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VRDHPDVSGLENDQALKLAEQEADVALNQAVQRARHMGSLPAGLTRLLRKEWQPELDWRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH LLRRFLEHCANSDYSWSTPNRRYLYQNIYLPARREARLPHVVLAVDCSGSVDEKVLSIFC HHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHH TELFSVLDAYDTTLTVLFHDTKIQGEITFNRMSMPTDLMPVGGGGTDYRPVCAHIADQNL HHHHHHHHHHCCEEEEEEECCEEEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHCCCC HPTCLIWFTDLECNRFPHEPDYPVLWVCSEPDAEQPPFGELVSLMAGPAQTWPPTPAAQH CCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC R C >Mature Secondary Structure SEHDSLLRRPCDSSPPEGDLSRRAALAMKKARTALVLDHPFFGSLALRLRLREDATCGD CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCEEEEEEECCCCCCCC MWTDGKNLGFNPAYAATLPEARLVAAQAHEIMHLAFGHHLRRKGREEKMWNRACDLAINH CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILLESGFDLPEGFAHDPAYAGMSADDIYEALAVLQESASRGDARGDAARGDGQDQEGAGA HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC MSFDGGKELGGKSAARAGGGQKDKSGQEQDKQGASGATPTANKDRGIPMQGEGKTSFTGE CCCCCCHHCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VRDHPDVSGLENDQALKLAEQEADVALNQAVQRARHMGSLPAGLTRLLRKEWQPELDWRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH LLRRFLEHCANSDYSWSTPNRRYLYQNIYLPARREARLPHVVLAVDCSGSVDEKVLSIFC HHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHH TELFSVLDAYDTTLTVLFHDTKIQGEITFNRMSMPTDLMPVGGGGTDYRPVCAHIADQNL HHHHHHHHHHCCEEEEEEECCEEEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHCCCC HPTCLIWFTDLECNRFPHEPDYPVLWVCSEPDAEQPPFGELVSLMAGPAQTWPPTPAAQH CCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]