| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904982
Identifier: 220904982
GI number: 220904982
Start: 2078752
End: 2079936
Strand: Reverse
Name: 220904982
Synonym: Ddes_1718
Alternate gene names: NA
Gene position: 2079936-2078752 (Counterclockwise)
Preceding gene: 220904988
Following gene: 220904981
Centisome position: 72.38
GC content: 60.0
Gene sequence:
>1185_bases ATGCCGCGTTTTTCGCAGTGGCGGAGCGGATTTCCCGGATTGTTGTGGAGCATTCGGCAGCGTGAGTCTCGGCTCAAGCT TTTTACGCGCTGGCAGGTGGAGGGGCTGGATGCTCCCCAGTTGCTGAAGAATGCCACGTACCGCAAGCAGGTTGTCATGC CGGAAGACTATCCTCTTCTGGTGGAATTCTGGGATATGATTCATGCCGCGCGGCCTGCTGCGGCCATTTTTCGCCTGCGG GCGGACGGGGGGCGTAAGCCGCTCATTCTGCAGGGCTGGCCCGAACCCGGGCAGGACGTGTACAGCGGCTTGCTTAAAAG CGCTTTTTTGCCCGGCGGCTACGGATCGGCATGCTATAACGCGCAGCTTGGCATGCGTGTGGGCGATGTGGATTATCCGG TGTTTACCATTGATCTGGAAGACTGCCGCCTCAAGGAAGCGAATACGGCCGCGAGCAGGCTGTTCATGCGTCAGGGGCAG GGCTGCAGCCTTTTGTCGCTGGAAGATATCGCGCCGCAGAATCTGGGGGAGCAGCTTCTCAGTGCCGCACGCCAGGCTGT ACGGGATGATGCGTGGTCGGGAAAACTCATGCTGGGCAATGCGGAGCGCGGGCTTTTTTCAACCTACGTGCGACTGACCC CCTGGGGCGGGGCGCAGGGCCGGGTAGTGCGGGCTGCCCTGGTGCGTGTGGACGCCAAAACCATGATGCGTCCCTTTGGT ACAGACAGCGATGGGGCCTTGCGCCCGGGCGACCTGCGCCCCGCCCTGGAAGAACTTTGGAACACATGCGGCCCGGAGGT GGACGGGCTTATGCTGTCGCACATTCAGTCCGGTAGCGGCAAGGTAACAGTCTACGGTGTGGGGCGCGCATTTGACAGTC TGGAATGGGGCGCCGTTCATGCCTACGAAGGAACCATCGCGCAAGACATAGAACGTTTTGATCTGAGTTCGCTGCTGGTC GAAGATACGCTGGACAGCGTAAAATCTGTAGACTGGGCGCTGTTTACGCCCCTGGGCGTACGTTCATATTATGCATGCCC TTTTTATGCGGAGCACGGCCTGCATGCCGTGCTCATCCTGGCCAGCCGTAAGGCAAAAACATTCGGTACGGATGCAGATG CGCGCTATGCCTGTGTAGCCGAATCTTTCGGCAGGCTGATGCAACGCTGGAGACAGCGGGGGTGA
Upstream 100 bases:
>100_bases AATTATACTGTGAAAAAGGGCTTGCCCTGCAAATGTATCTATTTTACTGGCAAGCAGACCGGCAGCAACCGGTTGTGCCC AAAAGGCTGAAGGAGTTTGT
Downstream 100 bases:
>100_bases CAGCCTTGCAGGAGGATCCGGAGGCGCTGCGAAGCGCCTTGCCGACCAGCGCCGTGCTGCTTTCGGCTTGCCGGACGGGG CGGTTTGTGTTCTGGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MPRFSQWRSGFPGLLWSIRQRESRLKLFTRWQVEGLDAPQLLKNATYRKQVVMPEDYPLLVEFWDMIHAARPAAAIFRLR ADGGRKPLILQGWPEPGQDVYSGLLKSAFLPGGYGSACYNAQLGMRVGDVDYPVFTIDLEDCRLKEANTAASRLFMRQGQ GCSLLSLEDIAPQNLGEQLLSAARQAVRDDAWSGKLMLGNAERGLFSTYVRLTPWGGAQGRVVRAALVRVDAKTMMRPFG TDSDGALRPGDLRPALEELWNTCGPEVDGLMLSHIQSGSGKVTVYGVGRAFDSLEWGAVHAYEGTIAQDIERFDLSSLLV EDTLDSVKSVDWALFTPLGVRSYYACPFYAEHGLHAVLILASRKAKTFGTDADARYACVAESFGRLMQRWRQRG
Sequences:
>Translated_394_residues MPRFSQWRSGFPGLLWSIRQRESRLKLFTRWQVEGLDAPQLLKNATYRKQVVMPEDYPLLVEFWDMIHAARPAAAIFRLR ADGGRKPLILQGWPEPGQDVYSGLLKSAFLPGGYGSACYNAQLGMRVGDVDYPVFTIDLEDCRLKEANTAASRLFMRQGQ GCSLLSLEDIAPQNLGEQLLSAARQAVRDDAWSGKLMLGNAERGLFSTYVRLTPWGGAQGRVVRAALVRVDAKTMMRPFG TDSDGALRPGDLRPALEELWNTCGPEVDGLMLSHIQSGSGKVTVYGVGRAFDSLEWGAVHAYEGTIAQDIERFDLSSLLV EDTLDSVKSVDWALFTPLGVRSYYACPFYAEHGLHAVLILASRKAKTFGTDADARYACVAESFGRLMQRWRQRG >Mature_393_residues PRFSQWRSGFPGLLWSIRQRESRLKLFTRWQVEGLDAPQLLKNATYRKQVVMPEDYPLLVEFWDMIHAARPAAAIFRLRA DGGRKPLILQGWPEPGQDVYSGLLKSAFLPGGYGSACYNAQLGMRVGDVDYPVFTIDLEDCRLKEANTAASRLFMRQGQG CSLLSLEDIAPQNLGEQLLSAARQAVRDDAWSGKLMLGNAERGLFSTYVRLTPWGGAQGRVVRAALVRVDAKTMMRPFGT DSDGALRPGDLRPALEELWNTCGPEVDGLMLSHIQSGSGKVTVYGVGRAFDSLEWGAVHAYEGTIAQDIERFDLSSLLVE DTLDSVKSVDWALFTPLGVRSYYACPFYAEHGLHAVLILASRKAKTFGTDADARYACVAESFGRLMQRWRQRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43808; Mature: 43676
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFSQWRSGFPGLLWSIRQRESRLKLFTRWQVEGLDAPQLLKNATYRKQVVMPEDYPLL CCCCCCHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCHHHCEEECCCCCHHH VEFWDMIHAARPAAAIFRLRADGGRKPLILQGWPEPGQDVYSGLLKSAFLPGGYGSACYN HHHHHHHHHCCCHHHEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHCC AQLGMRVGDVDYPVFTIDLEDCRLKEANTAASRLFMRQGQGCSLLSLEDIAPQNLGEQLL CCCCCEECCCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHH SAARQAVRDDAWSGKLMLGNAERGLFSTYVRLTPWGGAQGRVVRAALVRVDAKTMMRPFG HHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC TDSDGALRPGDLRPALEELWNTCGPEVDGLMLSHIQSGSGKVTVYGVGRAFDSLEWGAVH CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEE AYEGTIAQDIERFDLSSLLVEDTLDSVKSVDWALFTPLGVRSYYACPFYAEHGLHAVLIL EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCEECCCCHHHCCCEEEEEE ASRKAKTFGTDADARYACVAESFGRLMQRWRQRG ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRFSQWRSGFPGLLWSIRQRESRLKLFTRWQVEGLDAPQLLKNATYRKQVVMPEDYPLL CCCCCHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCHHHCEEECCCCCHHH VEFWDMIHAARPAAAIFRLRADGGRKPLILQGWPEPGQDVYSGLLKSAFLPGGYGSACYN HHHHHHHHHCCCHHHEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHCC AQLGMRVGDVDYPVFTIDLEDCRLKEANTAASRLFMRQGQGCSLLSLEDIAPQNLGEQLL CCCCCEECCCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHH SAARQAVRDDAWSGKLMLGNAERGLFSTYVRLTPWGGAQGRVVRAALVRVDAKTMMRPFG HHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC TDSDGALRPGDLRPALEELWNTCGPEVDGLMLSHIQSGSGKVTVYGVGRAFDSLEWGAVH CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEE AYEGTIAQDIERFDLSSLLVEDTLDSVKSVDWALFTPLGVRSYYACPFYAEHGLHAVLIL EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCEECCCCHHHCCCEEEEEE ASRKAKTFGTDADARYACVAESFGRLMQRWRQRG ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA