Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220904916

Identifier: 220904916

GI number: 220904916

Start: 1987671

End: 1988273

Strand: Direct

Name: 220904916

Synonym: Ddes_1651

Alternate gene names: NA

Gene position: 1987671-1988273 (Clockwise)

Preceding gene: 220904915

Following gene: 220904939

Centisome position: 69.17

GC content: 53.07

Gene sequence:

>603_bases
ATGCGTAAGGCATATATTATCGCAGTACTGGTGCTGTTTTTTACAGGCTATATATTCTCTGTGCAGAAGATGGAGCGCAT
CGTTACGGACGGCAAAACCGTGCTGCTTCCTCTTGCCCCTGTAGACCCGCGTGCACTGCTTATGGGCGACTATATGGACC
TCAGCTATGTGGTCAATGGAGATATTTACAGTGCCTTGCAAAAAGCAGAAGCCACCCGCGATGTCCCTGGTTCCCCTTCT
GCCCCCCCTGCTGCCGCTCGCCCCCAAAATACAGGAACTTCCGCCATGCCCTCTCACGGCCTGGCTGTGCTACGGGTAAC
CAATGTTCCGGTTCCGCTGGCTGCGGACTTTGTGCGCCTCTACGATGGCAAGGACTTGCGGGATGAGGAATTTCTGCTGG
CCTACAAACTGCGCGGGCACAGAGTGATCAGCGTGACTTCGGCGTTTTATTTTGAGGAAGGTAGCGCAAAACGCTACGAA
CAAGCCCACTTCGGACTCTTCAAGGTCGCCAATGATGGAAAAACCCTTCTTGTTAATCTTTGCGACAGCCAGGGTCGGCC
CATACAGTATGAAAAAACAGCAGAACAGGAAGTTCAGCCCTAG

Upstream 100 bases:

>100_bases
GCAAAAGCCCTGTATCTGACGGCGACCGGCATTGTTTTGCTGTTGCTTGCCCTGAGCTTGCGCACCTGGTCTGCAAAAAT
AACGGCAAAGGAGGCAGCCG

Downstream 100 bases:

>100_bases
ATGTAATGTTCCAATAGGTTGTTCACCCTCCCAAAATCGGTAAAGCTGGAGTTACCAGACAACAGCAAACCGAATGAGGG
AAAGGGTGAAAACCTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRKAYIIAVLVLFFTGYIFSVQKMERIVTDGKTVLLPLAPVDPRALLMGDYMDLSYVVNGDIYSALQKAEATRDVPGSPS
APPAAARPQNTGTSAMPSHGLAVLRVTNVPVPLAADFVRLYDGKDLRDEEFLLAYKLRGHRVISVTSAFYFEEGSAKRYE
QAHFGLFKVANDGKTLLVNLCDSQGRPIQYEKTAEQEVQP

Sequences:

>Translated_200_residues
MRKAYIIAVLVLFFTGYIFSVQKMERIVTDGKTVLLPLAPVDPRALLMGDYMDLSYVVNGDIYSALQKAEATRDVPGSPS
APPAAARPQNTGTSAMPSHGLAVLRVTNVPVPLAADFVRLYDGKDLRDEEFLLAYKLRGHRVISVTSAFYFEEGSAKRYE
QAHFGLFKVANDGKTLLVNLCDSQGRPIQYEKTAEQEVQP
>Mature_200_residues
MRKAYIIAVLVLFFTGYIFSVQKMERIVTDGKTVLLPLAPVDPRALLMGDYMDLSYVVNGDIYSALQKAEATRDVPGSPS
APPAAARPQNTGTSAMPSHGLAVLRVTNVPVPLAADFVRLYDGKDLRDEEFLLAYKLRGHRVISVTSAFYFEEGSAKRYE
QAHFGLFKVANDGKTLLVNLCDSQGRPIQYEKTAEQEVQP

Specific function: Unknown

COG id: COG4929

COG function: function code S; Uncharacterized membrane-anchored protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22087; Mature: 22087

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAYIIAVLVLFFTGYIFSVQKMERIVTDGKTVLLPLAPVDPRALLMGDYMDLSYVVNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEEECC
DIYSALQKAEATRDVPGSPSAPPAAARPQNTGTSAMPSHGLAVLRVTNVPVPLAADFVRL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
YDGKDLRDEEFLLAYKLRGHRVISVTSAFYFEEGSAKRYEQAHFGLFKVANDGKTLLVNL
HCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHCCEEEEECCCCEEEEEE
CDSQGRPIQYEKTAEQEVQP
CCCCCCCEEECCCCHHCCCC
>Mature Secondary Structure
MRKAYIIAVLVLFFTGYIFSVQKMERIVTDGKTVLLPLAPVDPRALLMGDYMDLSYVVNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEEECC
DIYSALQKAEATRDVPGSPSAPPAAARPQNTGTSAMPSHGLAVLRVTNVPVPLAADFVRL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
YDGKDLRDEEFLLAYKLRGHRVISVTSAFYFEEGSAKRYEQAHFGLFKVANDGKTLLVNL
HCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHCCEEEEECCCCEEEEEE
CDSQGRPIQYEKTAEQEVQP
CCCCCCCEEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA