| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is gltK [H]
Identifier: 220904829
GI number: 220904829
Start: 1877397
End: 1878074
Strand: Direct
Name: gltK [H]
Synonym: Ddes_1562
Alternate gene names: 220904829
Gene position: 1877397-1878074 (Clockwise)
Preceding gene: 220904828
Following gene: 220904830
Centisome position: 65.34
GC content: 52.36
Gene sequence:
>678_bases ATGCTTGATTTTGACTGGAGCATCATTGAACAAAGCCTGCCGCTGCTGCAAAAGGGCATTCTGGTAACGCTCAAGATAAC GATCACGTCCATCATTCTGGGCATGGTGCTCGGCACACTTCTGGCTGTGGCCCGCATTTCCATCTATGCGCCCTTGCGCT GGCTTGCAGCGGCCTATGTCAACTGCTTCCGCTCCATCCCCCTGGTTATGGTGTTGTTGTGGTTTTATCTTATCGTACCG CAGTTTTTAACGAAATTTCTTAATCTGTCTCCTCTGACCGATATCCGCCTTGTTTCCGCCATGGTGGCCTTTACCGCTTT TGAGGCCGCGTATTATTCTGAAATCATCCGGGCGGGCATGAACAGCGTCTCCAGAGGGCAAAACTACGCGGCCCTTGCCC TCGGCATGACCAAGTCGCAAACGCTCATCTATGTCATTCTGCCGCAGGCTTTCCGCGTCATGACGCCCCTGCTGCTCACA CAGGGCGTGATTTTGTTTCAGGACACGGCCCTTGTATACATCATAGGCCTTGCGGACTTTTTCCGCACTGCCACCAACAT AGGCAAAACCACCGGCTATGAAATAGAAATGGTGCTCTTTGCGGGCGCCGGCTACTTTGTTGTCTGCTTCTGCGTTTCCC TGGCCGTAACCGTGGTAAAAAAGAGACTCAAGCTATGA
Upstream 100 bases:
>100_bases GTCACGCTGGCGTATGTGTTTTTGAACTTTATCGTCATGCGGGCCATGAAGATGCTTGAAAAGAAAATGCGGCTGCCCTC CACCGGCATGGGAGGCAAAA
Downstream 100 bases:
>100_bases ATATACCCACCGAAGAAGCAATGATCGTCCTGAACAACGTATCCAAATGGTACGGTGATTTTAACGTGCTGCGGGACTGC ACAACCAGCATCCACAAAGG
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLDFDWSIIEQSLPLLQKGILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYVNCFRSIPLVMVLLWFYLIVP QFLTKFLNLSPLTDIRLVSAMVAFTAFEAAYYSEIIRAGMNSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMTPLLLT QGVILFQDTALVYIIGLADFFRTATNIGKTTGYEIEMVLFAGAGYFVVCFCVSLAVTVVKKRLKL
Sequences:
>Translated_225_residues MLDFDWSIIEQSLPLLQKGILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYVNCFRSIPLVMVLLWFYLIVP QFLTKFLNLSPLTDIRLVSAMVAFTAFEAAYYSEIIRAGMNSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMTPLLLT QGVILFQDTALVYIIGLADFFRTATNIGKTTGYEIEMVLFAGAGYFVVCFCVSLAVTVVKKRLKL >Mature_225_residues MLDFDWSIIEQSLPLLQKGILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYVNCFRSIPLVMVLLWFYLIVP QFLTKFLNLSPLTDIRLVSAMVAFTAFEAAYYSEIIRAGMNSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMTPLLLT QGVILFQDTALVYIIGLADFFRTATNIGKTTGYEIEMVLFAGAGYFVVCFCVSLAVTVVKKRLKL
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=63.963963963964, Blast_Score=296, Evalue=6e-82, Organism=Escherichia coli, GI1788226, Length=203, Percent_Identity=37.4384236453202, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=34.1232227488152, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787030, Length=224, Percent_Identity=29.9107142857143, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1786874, Length=237, Percent_Identity=27.0042194092827, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787087, Length=203, Percent_Identity=26.6009852216749, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI48994930, Length=131, Percent_Identity=31.2977099236641, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1788646, Length=207, Percent_Identity=27.0531400966184, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=26.8518518518519, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788645, Length=179, Percent_Identity=29.608938547486, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24987; Mature: 24987
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFDWSIIEQSLPLLQKGILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYV CCCCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NCFRSIPLVMVLLWFYLIVPQFLTKFLNLSPLTDIRLVSAMVAFTAFEAAYYSEIIRAGM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMTPLLLTQGVILFQDTALVYIIGLADF HHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHH FRTATNIGKTTGYEIEMVLFAGAGYFVVCFCVSLAVTVVKKRLKL HHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDFDWSIIEQSLPLLQKGILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYV CCCCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NCFRSIPLVMVLLWFYLIVPQFLTKFLNLSPLTDIRLVSAMVAFTAFEAAYYSEIIRAGM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMTPLLLTQGVILFQDTALVYIIGLADF HHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHH FRTATNIGKTTGYEIEMVLFAGAGYFVVCFCVSLAVTVVKKRLKL HHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]