Click here to switch to the map view.

The map label for this gene is ygcA [C]

Identifier: 220904778

GI number: 220904778

Start: 1802607

End: 1803434

Strand: Direct

Name: ygcA [C]

Synonym: Ddes_1510

Alternate gene names: 220904778

Gene position: 1802607-1803434 (Clockwise)

Preceding gene: 220904777

Following gene: 220904785

Centisome position: 62.73

GC content: 56.04

Gene sequence:

>828_bases
ATGCCTGTAACGATGCGTACCTTTGAAAACCTTTGGGTTGACTACCAGCCGGAACGAACCGGCATGGCAGATTTTTGGAA
CAAACGCGCGCCCTCGTTCAACGATCACGTCCGGCGCGAAGCTTCACGCGAACACCGGCGCCTCCTTGTGGGGCATATCG
CCCGCAAGGCGCAGCTTGATCCGTCGGGGGCCGTACTTGATATCGGCTGCGGTCCCGGCAGCCACGCCCTGGAACTGGCC
TCGCTGGCGGGAAGCGTGGAGGGCTTCGACATCGCCCCTAAAATGGTAGAACTCGCCAAAGAAAACGCTGCGCGGGACGG
TTGCGCCAACGCGCATTTTCAGGTGCTGGACTGGAGCCATGCGGATCTGGACGACCAGGGCTGGAGAAAAAAATTTCAGA
TGGTTCTTGCCTCCAGAACCCCGGCAGTCAACGACCGGGCAGCTCTGGAAAAAATGATCGCCGCCTCCTGCGGCTATTGC
TGCATGATAAGCCAGGTTGATACCCGCCACTCGGTTCGTGACCACCTGAAGACGCTCGTTGACTGGGATGCGCATAAAGA
ACGTATAAGCCGCAGTTTTTATTGTGCCTTCAACCTTCTTTGGCTTATGGGCCATTACCCCGAAGTGGAATATATGGACC
GGGCATGGGAAAGCGACAGCAGCCTTGAAGAGGCGGAACTGATGTATCTGCGTTACTTTGAAAGTATGGGGCCACTTAGC
CCGCAGCAAAAAGAAAACCTGACCCGCACACTGGTGAAAATCAGCCGTGACGGCCGCGTGCATGAAAGTGTGCAGACAAA
AGTAGCCATCATGTTCTGGGCCGTTTAA

Upstream 100 bases:

>100_bases
TTGTGGTTGATGCTGCCGGAGTAGCCGCCGCCCTCAAAGATGACGATTGCGAAGCCATCTTTTCCCGGGGCGGCCAAAAG
GTAAATATGGTGGCCGAATC

Downstream 100 bases:

>100_bases
AATAAGTTACCGTTGAAATATCTTGTGGGGGATGGACCCTTTTTTAAAACGATCCCGCCCCGGGCCTGAAAACCTTTATT
TTTGTTTCAGCCTGTTAGGG

Product: cyclopropane-fatty-acyl-phospholipid synthase

Products: NA

Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Cyclopropane-Fatty-Acyl-Phospholipid Synthase; Ribosomal RNA Adenine Dimethylase; PfkB-Family Carbohydrate Kinase; Serine Protease; Methyltransferase Domain Protein; RNA Cap Guanine-N2 Methyltransferase

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MPVTMRTFENLWVDYQPERTGMADFWNKRAPSFNDHVRREASREHRRLLVGHIARKAQLDPSGAVLDIGCGPGSHALELA
SLAGSVEGFDIAPKMVELAKENAARDGCANAHFQVLDWSHADLDDQGWRKKFQMVLASRTPAVNDRAALEKMIAASCGYC
CMISQVDTRHSVRDHLKTLVDWDAHKERISRSFYCAFNLLWLMGHYPEVEYMDRAWESDSSLEEAELMYLRYFESMGPLS
PQQKENLTRTLVKISRDGRVHESVQTKVAIMFWAV

Sequences:

>Translated_275_residues
MPVTMRTFENLWVDYQPERTGMADFWNKRAPSFNDHVRREASREHRRLLVGHIARKAQLDPSGAVLDIGCGPGSHALELA
SLAGSVEGFDIAPKMVELAKENAARDGCANAHFQVLDWSHADLDDQGWRKKFQMVLASRTPAVNDRAALEKMIAASCGYC
CMISQVDTRHSVRDHLKTLVDWDAHKERISRSFYCAFNLLWLMGHYPEVEYMDRAWESDSSLEEAELMYLRYFESMGPLS
PQQKENLTRTLVKISRDGRVHESVQTKVAIMFWAV
>Mature_274_residues
PVTMRTFENLWVDYQPERTGMADFWNKRAPSFNDHVRREASREHRRLLVGHIARKAQLDPSGAVLDIGCGPGSHALELAS
LAGSVEGFDIAPKMVELAKENAARDGCANAHFQVLDWSHADLDDQGWRKKFQMVLASRTPAVNDRAALEKMIAASCGYCC
MISQVDTRHSVRDHLKTLVDWDAHKERISRSFYCAFNLLWLMGHYPEVEYMDRAWESDSSLEEAELMYLRYFESMGPLSP
QQKENLTRTLVKISRDGRVHESVQTKVAIMFWAV

Specific function: Could Be A 23s rRNA (Uracil-5-)-Methyltransferase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31420; Mature: 31289

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00636 DNAJ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTMRTFENLWVDYQPERTGMADFWNKRAPSFNDHVRREASREHRRLLVGHIARKAQLD
CCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSGAVLDIGCGPGSHALELASLAGSVEGFDIAPKMVELAKENAARDGCANAHFQVLDWSH
CCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCC
ADLDDQGWRKKFQMVLASRTPAVNDRAALEKMIAASCGYCCMISQVDTRHSVRDHLKTLV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
DWDAHKERISRSFYCAFNLLWLMGHYPEVEYMDRAWESDSSLEEAELMYLRYFESMGPLS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PQQKENLTRTLVKISRDGRVHESVQTKVAIMFWAV
CHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEEC
>Mature Secondary Structure 
PVTMRTFENLWVDYQPERTGMADFWNKRAPSFNDHVRREASREHRRLLVGHIARKAQLD
CCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSGAVLDIGCGPGSHALELASLAGSVEGFDIAPKMVELAKENAARDGCANAHFQVLDWSH
CCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCC
ADLDDQGWRKKFQMVLASRTPAVNDRAALEKMIAASCGYCCMISQVDTRHSVRDHLKTLV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
DWDAHKERISRSFYCAFNLLWLMGHYPEVEYMDRAWESDSSLEEAELMYLRYFESMGPLS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PQQKENLTRTLVKISRDGRVHESVQTKVAIMFWAV
CHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA