| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904767
Identifier: 220904767
GI number: 220904767
Start: 1790195
End: 1791463
Strand: Direct
Name: 220904767
Synonym: Ddes_1499
Alternate gene names: NA
Gene position: 1790195-1791463 (Clockwise)
Preceding gene: 220904764
Following gene: 220904768
Centisome position: 62.3
GC content: 57.6
Gene sequence:
>1269_bases ATGTACATTTCGGGCATGCGTCGCTCAAAATTCTCAGGCGTGTACTCCTTTTCCACCGACTGGACGGAAAGCCGCCGCAA AACCCACTACTTTGTCTGGGAGCTGCCGGACGGGGCATTTGCGGTACAAGAACTCAACAACGCCTTCCAGCCGTTGGCTG ATCCCGAAAGAATCAGCGCCAGATCCTTCAAAAAAAACTTCAAGGCAGAGCCGGAAATCCTGGCGATGCCTGTCACTACG CCTGACCTCACGCAACTTGAAAGCAAAAACGCGGCGGGCAATACACAACAAACTGTAACTACAGGACAAAAAACAAAAAC CGCTCAGGAGACCAGGCAGGAGGAACAGCCCCGGAGCACGGCACAACCCCAGGCCCCCGAGCAGGATGAAACACAAGGCG GCCCAAAGGAACAGGCTGGCCCCCGGAACAGATCTGCAGGCGGACACGAGGCTGACCCGGCCGCCGGGCGGGAATCCGTC CCGCCAGACTCTTCGCCTGTTGCTGCGCCACAAAAATTTTCCACTGCAAGCCAGAAATCTTCCGCAACCTTCCCCGCCGC GCCTGCAGCGCAGGCCGCTGCTACGCAACGGTCTGCGGTATCGCCGGAAGCACCACGCCCCGGAACTGCCGAAAAACAGA TCCCTCTTTTACAGAAACAGAAAAGCACAGCCTTTCCCGAGGCTGCCCTGGATGCGCTTGCGCGCTCCGAGGCTGAAAAA GCGCGGTCCAGGGCAACGGGCAGCAATCTTTCCGTTTCAGAAGATTCCTCACTCTCCCCTCCGACGCTGCGGAGTGCAGG CGCGGCGACAGTAAGCCGAGTTTACGACCCCGAAGCCGCACGCAAAGCCAAGATGACAGAATCGAAGCTGCGCGAAACCT TCCGTCAGGCGCTGCTCCGTCTGAAGCGCCCGCGCGAGCGCCAGGGGGCTTTAAAAGCGCTTGAACAGCTTGCCGAAACA ACAGAAGATATCTGCACAGCTCACAAGCACATGTTCAGAGACTTCGGCGTGAGGCTGCGGCAAAGTGCCCATCCGGATCT GGCCCTTCTGTTCAGCCGCAAGGTTGTGCAACTGGCTCCGGATGATGACCATGCCCACTTTAATCTGGCCCGCATTCTCT GTATGCTTGGGCAATACGATGATGCGGCCGCCCATATTCGCACGGCCATGGGTATGAATAGCGATAAGGGTCTGTATTTT CGGATGCTTGTATATATTCGCAAAGAAAAACTGCAAAACCGGGGGCGAAGCGCTTCGCCCGGCCGGTAA
Upstream 100 bases:
>100_bases GCAAGCTCTGTGCGATAGCCATTTCGTGCATGGCGGCATACTAGCTCAAAGGCCCTGCCACGTAAAGGCCGTAAGCCATT CTTGCCATTCGGCGTAAATA
Downstream 100 bases:
>100_bases AACGGCAGTTGGTCAACACTTGTTTTGGCAGGAGCCTTTTGGCATGAACAAAGTAATATTAAGTCTTCTTCTGGCTGTCT GTGTACTGGGCATGGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MYISGMRRSKFSGVYSFSTDWTESRRKTHYFVWELPDGAFAVQELNNAFQPLADPERISARSFKKNFKAEPEILAMPVTT PDLTQLESKNAAGNTQQTVTTGQKTKTAQETRQEEQPRSTAQPQAPEQDETQGGPKEQAGPRNRSAGGHEADPAAGRESV PPDSSPVAAPQKFSTASQKSSATFPAAPAAQAAATQRSAVSPEAPRPGTAEKQIPLLQKQKSTAFPEAALDALARSEAEK ARSRATGSNLSVSEDSSLSPPTLRSAGAATVSRVYDPEAARKAKMTESKLRETFRQALLRLKRPRERQGALKALEQLAET TEDICTAHKHMFRDFGVRLRQSAHPDLALLFSRKVVQLAPDDDHAHFNLARILCMLGQYDDAAAHIRTAMGMNSDKGLYF RMLVYIRKEKLQNRGRSASPGR
Sequences:
>Translated_422_residues MYISGMRRSKFSGVYSFSTDWTESRRKTHYFVWELPDGAFAVQELNNAFQPLADPERISARSFKKNFKAEPEILAMPVTT PDLTQLESKNAAGNTQQTVTTGQKTKTAQETRQEEQPRSTAQPQAPEQDETQGGPKEQAGPRNRSAGGHEADPAAGRESV PPDSSPVAAPQKFSTASQKSSATFPAAPAAQAAATQRSAVSPEAPRPGTAEKQIPLLQKQKSTAFPEAALDALARSEAEK ARSRATGSNLSVSEDSSLSPPTLRSAGAATVSRVYDPEAARKAKMTESKLRETFRQALLRLKRPRERQGALKALEQLAET TEDICTAHKHMFRDFGVRLRQSAHPDLALLFSRKVVQLAPDDDHAHFNLARILCMLGQYDDAAAHIRTAMGMNSDKGLYF RMLVYIRKEKLQNRGRSASPGR >Mature_422_residues MYISGMRRSKFSGVYSFSTDWTESRRKTHYFVWELPDGAFAVQELNNAFQPLADPERISARSFKKNFKAEPEILAMPVTT PDLTQLESKNAAGNTQQTVTTGQKTKTAQETRQEEQPRSTAQPQAPEQDETQGGPKEQAGPRNRSAGGHEADPAAGRESV PPDSSPVAAPQKFSTASQKSSATFPAAPAAQAAATQRSAVSPEAPRPGTAEKQIPLLQKQKSTAFPEAALDALARSEAEK ARSRATGSNLSVSEDSSLSPPTLRSAGAATVSRVYDPEAARKAKMTESKLRETFRQALLRLKRPRERQGALKALEQLAET TEDICTAHKHMFRDFGVRLRQSAHPDLALLFSRKVVQLAPDDDHAHFNLARILCMLGQYDDAAAHIRTAMGMNSDKGLYF RMLVYIRKEKLQNRGRSASPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46289; Mature: 46289
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS50293 TPR_REGION ; PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYISGMRRSKFSGVYSFSTDWTESRRKTHYFVWELPDGAFAVQELNNAFQPLADPERISA CCCCCCCHHHCCCEEECCCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHH RSFKKNFKAEPEILAMPVTTPDLTQLESKNAAGNTQQTVTTGQKTKTAQETRQEEQPRST HHHHHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHCCCCC AQPQAPEQDETQGGPKEQAGPRNRSAGGHEADPAAGRESVPPDSSPVAAPQKFSTASQKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC SATFPAAPAAQAAATQRSAVSPEAPRPGTAEKQIPLLQKQKSTAFPEAALDALARSEAEK CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHH ARSRATGSNLSVSEDSSLSPPTLRSAGAATVSRVYDPEAARKAKMTESKLRETFRQALLR HHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LKRPRERQGALKALEQLAETTEDICTAHKHMFRDFGVRLRQSAHPDLALLFSRKVVQLAP HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHEEECC DDDHAHFNLARILCMLGQYDDAAAHIRTAMGMNSDKGLYFRMLVYIRKEKLQNRGRSASP CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC GR CC >Mature Secondary Structure MYISGMRRSKFSGVYSFSTDWTESRRKTHYFVWELPDGAFAVQELNNAFQPLADPERISA CCCCCCCHHHCCCEEECCCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHH RSFKKNFKAEPEILAMPVTTPDLTQLESKNAAGNTQQTVTTGQKTKTAQETRQEEQPRST HHHHHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHCCCCC AQPQAPEQDETQGGPKEQAGPRNRSAGGHEADPAAGRESVPPDSSPVAAPQKFSTASQKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC SATFPAAPAAQAAATQRSAVSPEAPRPGTAEKQIPLLQKQKSTAFPEAALDALARSEAEK CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHH ARSRATGSNLSVSEDSSLSPPTLRSAGAATVSRVYDPEAARKAKMTESKLRETFRQALLR HHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LKRPRERQGALKALEQLAETTEDICTAHKHMFRDFGVRLRQSAHPDLALLFSRKVVQLAP HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHEEECC DDDHAHFNLARILCMLGQYDDAAAHIRTAMGMNSDKGLYFRMLVYIRKEKLQNRGRSASP CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA