| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904754
Identifier: 220904754
GI number: 220904754
Start: 1775678
End: 1776523
Strand: Direct
Name: 220904754
Synonym: Ddes_1486
Alternate gene names: NA
Gene position: 1775678-1776523 (Clockwise)
Preceding gene: 220904753
Following gene: 220904755
Centisome position: 61.8
GC content: 57.45
Gene sequence:
>846_bases ATGGCACAGGCCCTCTGTCTTTTGCATGCCAACTGCCAGGGCGAGGCGCTGCGGGTTCTGCTGGAGAATTCTCCGGCCTT TGCGCGGCGCTTTGTTGTCCGACACTATGTCAACTACACACGGGAGCATATTGACGGGCGCGATCTGGAAAAATGCTCCC TTTTTCTGTATCAGGCCCTGGCCCCCAAATGGGGCCATATCTCCACCGAACAAATATTGCCCCGCCTGCCCCGGTCTTGC CAGTCAATTGAAATTCCCAATCTGTTTTTCAAGGGATATTGGCCCTTCTGGAGCAACGCCCCGTCCATCAATTTCGGCGA CAGCCTGCTTGAAACCTTGCTGGCAAAAGGCCTGAGTCCGCAGGACGCGCTCAATGTCTACCTGCGGGCAGGCCCTGCTC TTATGGGAGATGTGGCAGCCGTAGCTGAAGAAAGCCTGCTGCGGGAAGAAAAAAAACAGGCCGCAGGTCCCATAAACTGC GCATCGCTGCTACGCGAGCGCTGGCGTGATGAGCAGCTTTTCATTACTGTGAACCATCCCGGACGCACCCTGCTCTTTCA TGTGGCAGACAGCCTGCTGCGTCTGCTTGGCCTGGGGAACCTGCCACCGGATGTGCGCCGTGCCTATGTGCACCCGCTTG AAGATTTCTGGCTGCCCATCCACCCTGCCGTGGGATCTGTTTTGAGGCTGCCCTTTGCCACGGCTCACAGGCGTTATCCT GTCTACCGCACCAGCCTCACCCACGCGCAGTACACCGGCTGTTACCTTGCGTGCAGAAGCCATGATATTTCGGACCTTGT AACATTTCTGGAAAACCTGCCGCCCGGGCAGCATGCGTATGCCTGA
Upstream 100 bases:
>100_bases GCCCGGCTGGTGCGTTTGCACAGCGTTACCGTGTCGGAAAAAGGCGCGCAAAGCGCCACCTACCTGGAAACGCGCTAACC CGGCAGCATAAAATACAGCT
Downstream 100 bases:
>100_bases GCGCAAGAAAGGAGTTCTTATGAACGTATTGCTCATCAACGGCAGCCCCCACCCCAAAGGCTGTACCTTCACGGCACTGT CCACCGTGGCGGCGCAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MAQALCLLHANCQGEALRVLLENSPAFARRFVVRHYVNYTREHIDGRDLEKCSLFLYQALAPKWGHISTEQILPRLPRSC QSIEIPNLFFKGYWPFWSNAPSINFGDSLLETLLAKGLSPQDALNVYLRAGPALMGDVAAVAEESLLREEKKQAAGPINC ASLLRERWRDEQLFITVNHPGRTLLFHVADSLLRLLGLGNLPPDVRRAYVHPLEDFWLPIHPAVGSVLRLPFATAHRRYP VYRTSLTHAQYTGCYLACRSHDISDLVTFLENLPPGQHAYA
Sequences:
>Translated_281_residues MAQALCLLHANCQGEALRVLLENSPAFARRFVVRHYVNYTREHIDGRDLEKCSLFLYQALAPKWGHISTEQILPRLPRSC QSIEIPNLFFKGYWPFWSNAPSINFGDSLLETLLAKGLSPQDALNVYLRAGPALMGDVAAVAEESLLREEKKQAAGPINC ASLLRERWRDEQLFITVNHPGRTLLFHVADSLLRLLGLGNLPPDVRRAYVHPLEDFWLPIHPAVGSVLRLPFATAHRRYP VYRTSLTHAQYTGCYLACRSHDISDLVTFLENLPPGQHAYA >Mature_280_residues AQALCLLHANCQGEALRVLLENSPAFARRFVVRHYVNYTREHIDGRDLEKCSLFLYQALAPKWGHISTEQILPRLPRSCQ SIEIPNLFFKGYWPFWSNAPSINFGDSLLETLLAKGLSPQDALNVYLRAGPALMGDVAAVAEESLLREEKKQAAGPINCA SLLRERWRDEQLFITVNHPGRTLLFHVADSLLRLLGLGNLPPDVRRAYVHPLEDFWLPIHPAVGSVLRLPFATAHRRYPV YRTSLTHAQYTGCYLACRSHDISDLVTFLENLPPGQHAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31762; Mature: 31631
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQALCLLHANCQGEALRVLLENSPAFARRFVVRHYVNYTREHIDGRDLEKCSLFLYQAL CCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH APKWGHISTEQILPRLPRSCQSIEIPNLFFKGYWPFWSNAPSINFGDSLLETLLAKGLSP CCCCCCCCHHHHHHHCCHHHCCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCC QDALNVYLRAGPALMGDVAAVAEESLLREEKKQAAGPINCASLLRERWRDEQLFITVNHP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCC GRTLLFHVADSLLRLLGLGNLPPDVRRAYVHPLEDFWLPIHPAVGSVLRLPFATAHRRYP CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCHHHHHHHHCCHHHHHCCCC VYRTSLTHAQYTGCYLACRSHDISDLVTFLENLPPGQHAYA CHHHHCCHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AQALCLLHANCQGEALRVLLENSPAFARRFVVRHYVNYTREHIDGRDLEKCSLFLYQAL CCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH APKWGHISTEQILPRLPRSCQSIEIPNLFFKGYWPFWSNAPSINFGDSLLETLLAKGLSP CCCCCCCCHHHHHHHCCHHHCCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCC QDALNVYLRAGPALMGDVAAVAEESLLREEKKQAAGPINCASLLRERWRDEQLFITVNHP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCC GRTLLFHVADSLLRLLGLGNLPPDVRRAYVHPLEDFWLPIHPAVGSVLRLPFATAHRRYP CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCHHHHHHHHCCHHHHHCCCC VYRTSLTHAQYTGCYLACRSHDISDLVTFLENLPPGQHAYA CHHHHCCHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA