| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904740
Identifier: 220904740
GI number: 220904740
Start: 1762052
End: 1762852
Strand: Direct
Name: 220904740
Synonym: Ddes_1472
Alternate gene names: NA
Gene position: 1762052-1762852 (Clockwise)
Preceding gene: 220904739
Following gene: 220904741
Centisome position: 61.32
GC content: 58.93
Gene sequence:
>801_bases ATGCCTTATTGCAACAGCATCTCATACCCCCATGCCCCGGCAAGAGACAGCGCCCGCCCCCTCTGTTTTTTCTTGCACAT GCGCGGCTACACGTCACCGATCCCCGTCTCTCTGCTTGCCTGCCTTCTGGCTGCCGCCCTGTATTTTCTTTCCTGCACTC CCGCTCAGGCCCACAGGGTCAATATTTTTGCCTGGACTGAAGGCCGACAGGTGATGGTACAATGCGGCTTCAGCGGCGGA AACAACGTAAAGAACGGCCAGATAACGGTGTATGACGCCGCCAATGGCACAATATTGCTTGAAGGGCGCACCGACACCAA TGGTATGTTTCATTTTGACATACCACCACAAGGCAGAAAAAACGGCTTGCGTATACGTATCAATGCAGGTGAAGGGCATC AGAACGAATGGCAGCTTGATGCGGAAGAGCTGGACCAGGCTCCTGAACCTTCAGGCGCAAGTCCCGCGCAGACAGGAAAT ACCGGCAGTGTACCCGCAGCGCAACCTACGGATAGGCCCGTTACCGCGCGGGGGTCCACCGCACAGGTTGAGCCTGCAGC CGTTACCTCGGGCAACGGGGTTTCCATCGCAATAGAAGAAATACGCGCCAGTGTGGACGCCGCCCTTGAGGCGCAGGATG CCCGCTTCAACGCCCTGCTGGAGTCCCGCCTGGCCCCGCTGCGCCGCCAACTGGCGGAGATGCGGCAAGACGACCCGGGA TTACGGGAAATAGTGGGCGGCATGGGCTGGCTTGTGGGCCTGGCCGGAATTGCCCTGTATTTGCGCTCGCGGCATCGTTA A
Upstream 100 bases:
>100_bases TCGCGCCTGAAGCATGACGTGCCTGCGTGGCATACTTTTGCCCGTGCAACAGCCGGAACAGCCGTACAAAAAAGTTTTTC AGATCGGAAAGGAGTCGGCC
Downstream 100 bases:
>100_bases CGTTCATTTGCCGCCACATGTTTGATCAACCCTTTGTCCGCCCTTCAGCCATACAGCGCCTGGATCCGCGTGTACGCATG GGCAGCGCCGCTCTGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPYCNSISYPHAPARDSARPLCFFLHMRGYTSPIPVSLLACLLAAALYFLSCTPAQAHRVNIFAWTEGRQVMVQCGFSGG NNVKNGQITVYDAANGTILLEGRTDTNGMFHFDIPPQGRKNGLRIRINAGEGHQNEWQLDAEELDQAPEPSGASPAQTGN TGSVPAAQPTDRPVTARGSTAQVEPAAVTSGNGVSIAIEEIRASVDAALEAQDARFNALLESRLAPLRRQLAEMRQDDPG LREIVGGMGWLVGLAGIALYLRSRHR
Sequences:
>Translated_266_residues MPYCNSISYPHAPARDSARPLCFFLHMRGYTSPIPVSLLACLLAAALYFLSCTPAQAHRVNIFAWTEGRQVMVQCGFSGG NNVKNGQITVYDAANGTILLEGRTDTNGMFHFDIPPQGRKNGLRIRINAGEGHQNEWQLDAEELDQAPEPSGASPAQTGN TGSVPAAQPTDRPVTARGSTAQVEPAAVTSGNGVSIAIEEIRASVDAALEAQDARFNALLESRLAPLRRQLAEMRQDDPG LREIVGGMGWLVGLAGIALYLRSRHR >Mature_265_residues PYCNSISYPHAPARDSARPLCFFLHMRGYTSPIPVSLLACLLAAALYFLSCTPAQAHRVNIFAWTEGRQVMVQCGFSGGN NVKNGQITVYDAANGTILLEGRTDTNGMFHFDIPPQGRKNGLRIRINAGEGHQNEWQLDAEELDQAPEPSGASPAQTGNT GSVPAAQPTDRPVTARGSTAQVEPAAVTSGNGVSIAIEEIRASVDAALEAQDARFNALLESRLAPLRRQLAEMRQDDPGL REIVGGMGWLVGLAGIALYLRSRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28620; Mature: 28488
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYCNSISYPHAPARDSARPLCFFLHMRGYTSPIPVSLLACLLAAALYFLSCTPAQAHRV CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE NIFAWTEGRQVMVQCGFSGGNNVKNGQITVYDAANGTILLEGRTDTNGMFHFDIPPQGRK EEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCC NGLRIRINAGEGHQNEWQLDAEELDQAPEPSGASPAQTGNTGSVPAAQPTDRPVTARGST CCEEEEEECCCCCCCCEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC AQVEPAAVTSGNGVSIAIEEIRASVDAALEAQDARFNALLESRLAPLRRQLAEMRQDDPG CCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LREIVGGMGWLVGLAGIALYLRSRHR HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PYCNSISYPHAPARDSARPLCFFLHMRGYTSPIPVSLLACLLAAALYFLSCTPAQAHRV CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE NIFAWTEGRQVMVQCGFSGGNNVKNGQITVYDAANGTILLEGRTDTNGMFHFDIPPQGRK EEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCC NGLRIRINAGEGHQNEWQLDAEELDQAPEPSGASPAQTGNTGSVPAAQPTDRPVTARGST CCEEEEEECCCCCCCCEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC AQVEPAAVTSGNGVSIAIEEIRASVDAALEAQDARFNALLESRLAPLRRQLAEMRQDDPG CCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LREIVGGMGWLVGLAGIALYLRSRHR HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA