| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904372
Identifier: 220904372
GI number: 220904372
Start: 1291943
End: 1292731
Strand: Direct
Name: 220904372
Synonym: Ddes_1101
Alternate gene names: NA
Gene position: 1291943-1292731 (Clockwise)
Preceding gene: 220904371
Following gene: 220904375
Centisome position: 44.96
GC content: 54.37
Gene sequence:
>789_bases ATGAGCAATAGCCTGCATGTAGTTTTTTTCAGTCCCACCCACAGCAGCAAAAAGATTGTCCGGGCCATGGCTGGCGCTGT GGCTCCAACTGTCGGCAAATCTGTCATAGAGCATGATCTGACGTTTCCTGGTGGCCGCGAGAAAAAATTTTCCTGTGATG CGGATGATCTTTTGCTTCTGGGATTTCCGGTCTATGCGGGGCGGTTGCCACGCCCTGTATCAGGCTTTCTGGCTGGGCTT GTTGGTAACGGCGGGGTAGCCGTTCCTGTGGCAGTGTATGGCAACCGCCATTACGACGATGCGCTTTTAGAAGCTGTTGA TATTTTACAGGAACAGGGTTTTGCCGTACCGGCTGCGGCCGCGTTTGTAGCCGAGCACAGCCTGACGCCCAAGGTTGGGA CTGGGCGTCCGGACGCCCGGGATATGGTCGCTGTTGGGGATTTTTCCCAAAATGTGGCCGCAGCCGTGCTTTCCGCTTGC TGCAGTACCGTGACTGTGCCCGGGAACCGTCCGTACAGGGGGTTGCCCCCGGTTGTGGATATACGGCCTAAAACGTCGCA AAGCTGTACGCAGTGCATGCTCTGCGCAACAAACTGCCCGATGCAGGTCATCAGTTTTGATGATGCAGCGAAAATCAGCC AGGGCTGTATCCGCTGTTGCGCCTGCGTCAGGTCATGCCCGGAAGGCGCAAAGTATTTTGATCAAGAAACAGTACTGAAC ATCATGAATATACTGGAAAAAAACTGTCTGACCAGGAGAGAACCGGAGTTTTTTGTCGCCGGAGCATAG
Upstream 100 bases:
>100_bases GGCATACCAGCACGGGCGGCCTTTTTGTATTGAAAACTTGCTTCGTATGCCGTGCTTTTTTAAACTGCCTTGGCGCATGT ATAAGCGGGAGGTTTCACCC
Downstream 100 bases:
>100_bases CAACTGCCTGACGGCGCAGACTGAAAGAGCGGATACACACTTTGTGTGTATCCGCTCTTTTTGCAAGCAGCCCGCTCGCC AGTCGGGGCGTGTGCGTTCA
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSNSLHVVFFSPTHSSKKIVRAMAGAVAPTVGKSVIEHDLTFPGGREKKFSCDADDLLLLGFPVYAGRLPRPVSGFLAGL VGNGGVAVPVAVYGNRHYDDALLEAVDILQEQGFAVPAAAAFVAEHSLTPKVGTGRPDARDMVAVGDFSQNVAAAVLSAC CSTVTVPGNRPYRGLPPVVDIRPKTSQSCTQCMLCATNCPMQVISFDDAAKISQGCIRCCACVRSCPEGAKYFDQETVLN IMNILEKNCLTRREPEFFVAGA
Sequences:
>Translated_262_residues MSNSLHVVFFSPTHSSKKIVRAMAGAVAPTVGKSVIEHDLTFPGGREKKFSCDADDLLLLGFPVYAGRLPRPVSGFLAGL VGNGGVAVPVAVYGNRHYDDALLEAVDILQEQGFAVPAAAAFVAEHSLTPKVGTGRPDARDMVAVGDFSQNVAAAVLSAC CSTVTVPGNRPYRGLPPVVDIRPKTSQSCTQCMLCATNCPMQVISFDDAAKISQGCIRCCACVRSCPEGAKYFDQETVLN IMNILEKNCLTRREPEFFVAGA >Mature_261_residues SNSLHVVFFSPTHSSKKIVRAMAGAVAPTVGKSVIEHDLTFPGGREKKFSCDADDLLLLGFPVYAGRLPRPVSGFLAGLV GNGGVAVPVAVYGNRHYDDALLEAVDILQEQGFAVPAAAAFVAEHSLTPKVGTGRPDARDMVAVGDFSQNVAAAVLSACC STVTVPGNRPYRGLPPVVDIRPKTSQSCTQCMLCATNCPMQVISFDDAAKISQGCIRCCACVRSCPEGAKYFDQETVLNI MNILEKNCLTRREPEFFVAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27799; Mature: 27668
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLHVVFFSPTHSSKKIVRAMAGAVAPTVGKSVIEHDLTFPGGREKKFSCDADDLLLL CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GFPVYAGRLPRPVSGFLAGLVGNGGVAVPVAVYGNRHYDDALLEAVDILQEQGFAVPAAA ECHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHH AFVAEHSLTPKVGTGRPDARDMVAVGDFSQNVAAAVLSACCSTVTVPGNRPYRGLPPVVD HHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEE IRPKTSQSCTQCMLCATNCPMQVISFDDAAKISQGCIRCCACVRSCPEGAKYFDQETVLN CCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IMNILEKNCLTRREPEFFVAGA HHHHHHHHHCCCCCCCEEEECC >Mature Secondary Structure SNSLHVVFFSPTHSSKKIVRAMAGAVAPTVGKSVIEHDLTFPGGREKKFSCDADDLLLL CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GFPVYAGRLPRPVSGFLAGLVGNGGVAVPVAVYGNRHYDDALLEAVDILQEQGFAVPAAA ECHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHH AFVAEHSLTPKVGTGRPDARDMVAVGDFSQNVAAAVLSACCSTVTVPGNRPYRGLPPVVD HHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEE IRPKTSQSCTQCMLCATNCPMQVISFDDAAKISQGCIRCCACVRSCPEGAKYFDQETVLN CCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IMNILEKNCLTRREPEFFVAGA HHHHHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA