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The map label for this gene is argF [H]

Identifier: 220904353

GI number: 220904353

Start: 1266840

End: 1267733

Strand: Direct

Name: argF [H]

Synonym: Ddes_1081

Alternate gene names: 220904353

Gene position: 1266840-1267733 (Clockwise)

Preceding gene: 220904345

Following gene: 220904368

Centisome position: 44.09

GC content: 57.83

Gene sequence:

>894_bases
ATGGCTCGACATATTCTGACCATCAGAAAGCTGGGAGAAAAGGCGTGCTGGCTGCTTGTGCAGCAGGCCATGGGCATGCC
GGAGGCCAAGACCAGAACGAACTTCATGACGGAACGTGTGGCTGTGCTCATTTTTGCCCAGCACTCGCTGCCGGAAAGAC
TTTGCGTGTCAGCTGCCGTGCGGCAGCTGGGTGGGGCCGTGGTGTATGAGGGCAACCGCAGCGTATGGCGTTCGGAACTC
GCCGAATACCGCGAACAGCTCATGCCCATATTCAGTTATTATGTGGACTGCCTGTATACCTACGGGCTACCCGTCGCTTC
TTGGGATCCCGCCAGAATCGACCTGAGTTTCCCCCTTATCAACGCCGGCAGCCCGGATGCGCATCCGGCACACGCCCTGG
CGGATATTGCCTGCATGCTGCGCAATTCACGCAATCTCGGCAATGTCACCTGTGGCTGGCTTGGCTGCCTCAACGGCACC
CTGCATTCACTGGTGGAGGCCACGGCGTGGTTCCCCTTCAGTTTGCGCGTGGCCCTGCCTTCTCATGTAGACCCGGCACC
CCTGAAAAGGATCGTTGCCGAACTGGGAACGGATGTGACTTTTGTGGATACCCCGGAAGAAGCTGTGAAGGGCGCAGACT
ATGTTTTTGCTGGCTGCCGCAAGGGCCTCACGGAAGAAGAGCATGTGCGGTGGAACATTTGCAGTGAACTGCTGTCCAGG
GCAAGGCCCCATGTGCGCATCATGCTCAGCGCGCCGCCCATCAATGCCATCCGGGTAGAAAATGATATTCTGCGCAACAA
CAAGGCGTCCATGCTTATCCAGCAGTCTGAATACCGCCTGCGGGTGCACAAGCGCATGTTGCACTGGGTGTTTCTGGACA
ATGACGATTCCTGA

Upstream 100 bases:

>100_bases
TCAAGACGTTGCGCAGTACTTCTGGACAGAGGCATGGCAGCTTGTTAAGGTCATAGCACCGGGCAGAATCAACGTATGTG
ACGCCCGTCACGGAGGATTT

Downstream 100 bases:

>100_bases
CCGGAAACGGTCCTGTTTATAAGGCATACTGGTCTTGAAGCTTCTGCTGCCGGCCGGTAGCTGTTTATGGGGTGATGCCC
CCTTAGGTCCTGGCGTCACA

Product: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region

Products: NA

Alternate protein names: OTCase [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MARHILTIRKLGEKACWLLVQQAMGMPEAKTRTNFMTERVAVLIFAQHSLPERLCVSAAVRQLGGAVVYEGNRSVWRSEL
AEYREQLMPIFSYYVDCLYTYGLPVASWDPARIDLSFPLINAGSPDAHPAHALADIACMLRNSRNLGNVTCGWLGCLNGT
LHSLVEATAWFPFSLRVALPSHVDPAPLKRIVAELGTDVTFVDTPEEAVKGADYVFAGCRKGLTEEEHVRWNICSELLSR
ARPHVRIMLSAPPINAIRVENDILRNNKASMLIQQSEYRLRVHKRMLHWVFLDNDDS

Sequences:

>Translated_297_residues
MARHILTIRKLGEKACWLLVQQAMGMPEAKTRTNFMTERVAVLIFAQHSLPERLCVSAAVRQLGGAVVYEGNRSVWRSEL
AEYREQLMPIFSYYVDCLYTYGLPVASWDPARIDLSFPLINAGSPDAHPAHALADIACMLRNSRNLGNVTCGWLGCLNGT
LHSLVEATAWFPFSLRVALPSHVDPAPLKRIVAELGTDVTFVDTPEEAVKGADYVFAGCRKGLTEEEHVRWNICSELLSR
ARPHVRIMLSAPPINAIRVENDILRNNKASMLIQQSEYRLRVHKRMLHWVFLDNDDS
>Mature_296_residues
ARHILTIRKLGEKACWLLVQQAMGMPEAKTRTNFMTERVAVLIFAQHSLPERLCVSAAVRQLGGAVVYEGNRSVWRSELA
EYREQLMPIFSYYVDCLYTYGLPVASWDPARIDLSFPLINAGSPDAHPAHALADIACMLRNSRNLGNVTCGWLGCLNGTL
HSLVEATAWFPFSLRVALPSHVDPAPLKRIVAELGTDVTFVDTPEEAVKGADYVFAGCRKGLTEEEHVRWNICSELLSRA
RPHVRIMLSAPPINAIRVENDILRNNKASMLIQQSEYRLRVHKRMLHWVFLDNDDS

Specific function: Unknown

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002292 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: =2.1.3.3 [H]

Molecular weight: Translated: 33437; Mature: 33306

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHILTIRKLGEKACWLLVQQAMGMPEAKTRTNFMTERVAVLIFAQHSLPERLCVSAAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH
RQLGGAVVYEGNRSVWRSELAEYREQLMPIFSYYVDCLYTYGLPVASWDPARIDLSFPLI
HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECEE
NAGSPDAHPAHALADIACMLRNSRNLGNVTCGWLGCLNGTLHSLVEATAWFPFSLRVALP
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
SHVDPAPLKRIVAELGTDVTFVDTPEEAVKGADYVFAGCRKGLTEEEHVRWNICSELLSR
CCCCHHHHHHHHHHHCCCEEEEECCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHC
ARPHVRIMLSAPPINAIRVENDILRNNKASMLIQQSEYRLRVHKRMLHWVFLDNDDS
CCCCEEEEEECCCCCEEEECHHHHHCCCHHEEEEHHHHHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure 
ARHILTIRKLGEKACWLLVQQAMGMPEAKTRTNFMTERVAVLIFAQHSLPERLCVSAAV
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH
RQLGGAVVYEGNRSVWRSELAEYREQLMPIFSYYVDCLYTYGLPVASWDPARIDLSFPLI
HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECEE
NAGSPDAHPAHALADIACMLRNSRNLGNVTCGWLGCLNGTLHSLVEATAWFPFSLRVALP
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
SHVDPAPLKRIVAELGTDVTFVDTPEEAVKGADYVFAGCRKGLTEEEHVRWNICSELLSR
CCCCHHHHHHHHHHHCCCEEEEECCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHC
ARPHVRIMLSAPPINAIRVENDILRNNKASMLIQQSEYRLRVHKRMLHWVFLDNDDS
CCCCEEEEEECCCCCEEEECHHHHHCCCHHEEEEHHHHHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA