Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is pqqL [C]

Identifier: 220904343

GI number: 220904343

Start: 1253230

End: 1255866

Strand: Direct

Name: pqqL [C]

Synonym: Ddes_1070

Alternate gene names: 220904343

Gene position: 1253230-1255866 (Clockwise)

Preceding gene: 220904342

Following gene: 220904344

Centisome position: 43.61

GC content: 58.78

Gene sequence:

>2637_bases
ATGCGGCGTTTTTTTTCATTTGCGGCTCTGGCATTACTGCTTGCTCTGGCCTGCCCGGCAATTGCGGCCAGTGATAAACC
AGCCCAGGGGGATGACAGCGGGGTGCTTACGCGTCTGCCCAACGGGCTTACCGTCTATATTGTGAAGGATGTACGTTTTC
CCCTTGTAGCCACGCGCCTGTATGTACGCACAGGCTCTGCCAATGAAAAACCTGATCAGGCGGGTATCAGTCACCTGCTT
GAGCATATGGTGTTCAAGGGTACGGAGCACAGGCCAAAGGGCCAGGTGGCTCAGGATGTGGAGGCGCTGGGCGGCTACCT
CAATGCTGCCACCAGCTTTGACAAGACATGGTACATGACCGATATGCCCGCCGCGCATTGGCGCACCGGCATGGATGTGG
TCAAGGAAATGGCTTTCCAGCCTTCGCTGGATCCAAAAGAGCTGGAATCTGAAAAGGAAGTGGTCATTTCCGAGCTTGAA
GGCGATCAGGACTCGCCCATGAGCAGGCTTTTTGAAAGCCTGCAGACTTCTGCCTTGCAAAACACGGTTTACGGGCGGCC
CATCATCGGCTTTAAAGACACCATCCGGGCAGTCACGGCCGAGGATCTGCGTGCGTATGTGCGGCACTGGTATCAACCGC
AAAACATGCTGCTGCTGGTAGCCGGCGATATTGATCCGCAGGCGGTGCTGGCGTATAGCCAGAAGCTTTTTGGCGGCCTG
ACCAATAACGGCGACCTTGCCGAACCGCAACCCGTAAATCTGGCCGATGCTTCGGGCGGGCCGCGGGTAGAGGTTATCTA
CGGCCCCTGGAGCAAGGTTTATATGGGTATGGCTTTTCCCGTACCCGGCCTGCGCGACCTGCGTTCTGTGGATCTGGATG
TGCTCTGCTATCTCCTGGGTGGCGACGGTACATCCGAACTGTACCGCAAGTTCAAATATGAAAAACAGATGGTAGACAGC
ATCGGCATGGGCAACATGAGCCTGTCCCGTGCTGGTCTTGTCTATCTGAGCGCCCAGCTTGATGTGGACAAGGTGGAGCC
CTTCTGGCGTGAACTGACCAGGGACATGGCGGCCCTCAAGGCCGGGCAGTTCAGGCCGGAAGCCATTGAGCGGGCCAGGT
TCAACCTTGAGGATAATATGGACAGGGCAGGCGAGACCCTCAATGGTCTTGCTTCATGGCTCGGCACTGTACAGTTTGAA
CTGGGGGGCAAACAGGCCGAGATGAACCTGCGTTTTGCCCAGCGCAATGTGGATGTACCACAACTGGCTCAGGCCCTTGA
GCTGTGGCTCAACCCCCGGCAGGCGCGTGTGCGCGTGCTGGCCCCGGAAGGAGCGAAGCTTCCTGACCTGGAGGCCATCC
TGCAGCAGAACTGGCCCGGGCCTGAAAGTGATCAGGTGCGAAAGGCACGGGCTTCAAAGGCGGGCGAGCGCGAAGTGGTA
CAGCTGGGCGCTGGCCGCACCCTCATTTTGCAACCTGACGCCACGGTTCCCTACGTGGCCGTTGATATGATGCTCCCGGG
CGGCAACGCTTTACTCAAGCCAGATTGCCAAGGACTTGCTGGTCTTACGGCCCGCGCGCTTACCTCGGGCATCGGCACGC
TGGACGCCCAGGGTGTGGAACGCTTTTTTTCCGACCGCGCAGCGGCCATAGATGCCAGTGCCGGGCTGCAGAGCTTTACC
GTCTCCATTACCGGCCCGGCGCGCTTCAATGCAGACTATTTCGCCATACTGGGCGAAGCGTTGCGCAGCCCCAGGTTTGA
AGAAAAGGAAATACGGCGTGAAGCGGACAATATGAAAGCCGCCATACGTCAACGGTCCGACAGGCCTTCGTCCTACCTGT
TTTCCAAGCTCAACGGATTTCTTTTCCCTGGCGGCCAACCTTACGGCTATGACGGCCTGGGTAATGCGGAAAACCTCGAC
CGTTTTGGGGGCAAGGATGTACGCGCCTTCTGGCAGGAACAGATGGGACAGCCCTGGGTCCTTTCCATAGCCGGAGACTT
CGACCGTGAGGCCGTGCTGGCCTTCGCCCGGTCCCTGCCTGTACCCCGCACAGATATCCCCGCGCCGGGCGCTCCGGCAT
GGGGGCATGATAAAAAACTCGACCTGCACCTCCCCGGCCGCAATCAGGCGCATGTGCTCCAGGTTTTCAAGGCTGTGCCG
CCTACCCATGAGGATGCGCCGGCCCTGATGCTGCTTCAGGCCGTGCTTTCCGGTCAGAGCGGTCTGCTGTTCAGCCAGTT
GAGAGATGTGGAAGGCCTGGGTTACACGGTGACGGCTTTTTATCGCAGTATGCCCGAAGCAGGAATGATGGCTTTTTACA
TAGGCACTACTCCGGACAAAGTGGAGCAGGCCCGTAAAGGTTTTGGCAAGATTATTGCCGACATCAAGGCAAAACCCCTG
TCGGCTGCGCAACTGGAGGCCGGGGCAAACCGTCTGCTTGGCGCATACTTTCGCGAACGGCAAAGCCTGGGCGCACGGGC
TGCGGATGCCGCCGGTGATGCCCTTTTGCGCCGCCCCTATGACTTTGACCGCCAGCTTATTGAAAAGGCCGCAACCCTGA
CGCCTGCTCAGGTGCAGGCCGTGGCCAGGAAATATCTGGAGCAGGAAAACGCTTACGAACTGGTGCTCTTGCCCTGA

Upstream 100 bases:

>100_bases
CCTGCAAGGCCATCGCCGTTCGCGTTTCACAGGCACGGCAGCGGCCCACATCATAACAGCGGGCAGACGGGAGTGTCAGG
CCTGCAACGCAGGAGGTTTC

Downstream 100 bases:

>100_bases
CATACCTGTAGTTCCGCGAAGGTGCGTGACGACAGTGTGTTTTGCCCCCATCAGGCCTTTCAGGTGAAGCCTCTTGCGCG
AACCTGGAGCCTGATGGGGT

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 878; Mature: 878

Protein sequence:

>878_residues
MRRFFSFAALALLLALACPAIAASDKPAQGDDSGVLTRLPNGLTVYIVKDVRFPLVATRLYVRTGSANEKPDQAGISHLL
EHMVFKGTEHRPKGQVAQDVEALGGYLNAATSFDKTWYMTDMPAAHWRTGMDVVKEMAFQPSLDPKELESEKEVVISELE
GDQDSPMSRLFESLQTSALQNTVYGRPIIGFKDTIRAVTAEDLRAYVRHWYQPQNMLLLVAGDIDPQAVLAYSQKLFGGL
TNNGDLAEPQPVNLADASGGPRVEVIYGPWSKVYMGMAFPVPGLRDLRSVDLDVLCYLLGGDGTSELYRKFKYEKQMVDS
IGMGNMSLSRAGLVYLSAQLDVDKVEPFWRELTRDMAALKAGQFRPEAIERARFNLEDNMDRAGETLNGLASWLGTVQFE
LGGKQAEMNLRFAQRNVDVPQLAQALELWLNPRQARVRVLAPEGAKLPDLEAILQQNWPGPESDQVRKARASKAGEREVV
QLGAGRTLILQPDATVPYVAVDMMLPGGNALLKPDCQGLAGLTARALTSGIGTLDAQGVERFFSDRAAAIDASAGLQSFT
VSITGPARFNADYFAILGEALRSPRFEEKEIRREADNMKAAIRQRSDRPSSYLFSKLNGFLFPGGQPYGYDGLGNAENLD
RFGGKDVRAFWQEQMGQPWVLSIAGDFDREAVLAFARSLPVPRTDIPAPGAPAWGHDKKLDLHLPGRNQAHVLQVFKAVP
PTHEDAPALMLLQAVLSGQSGLLFSQLRDVEGLGYTVTAFYRSMPEAGMMAFYIGTTPDKVEQARKGFGKIIADIKAKPL
SAAQLEAGANRLLGAYFRERQSLGARAADAAGDALLRRPYDFDRQLIEKAATLTPAQVQAVARKYLEQENAYELVLLP

Sequences:

>Translated_878_residues
MRRFFSFAALALLLALACPAIAASDKPAQGDDSGVLTRLPNGLTVYIVKDVRFPLVATRLYVRTGSANEKPDQAGISHLL
EHMVFKGTEHRPKGQVAQDVEALGGYLNAATSFDKTWYMTDMPAAHWRTGMDVVKEMAFQPSLDPKELESEKEVVISELE
GDQDSPMSRLFESLQTSALQNTVYGRPIIGFKDTIRAVTAEDLRAYVRHWYQPQNMLLLVAGDIDPQAVLAYSQKLFGGL
TNNGDLAEPQPVNLADASGGPRVEVIYGPWSKVYMGMAFPVPGLRDLRSVDLDVLCYLLGGDGTSELYRKFKYEKQMVDS
IGMGNMSLSRAGLVYLSAQLDVDKVEPFWRELTRDMAALKAGQFRPEAIERARFNLEDNMDRAGETLNGLASWLGTVQFE
LGGKQAEMNLRFAQRNVDVPQLAQALELWLNPRQARVRVLAPEGAKLPDLEAILQQNWPGPESDQVRKARASKAGEREVV
QLGAGRTLILQPDATVPYVAVDMMLPGGNALLKPDCQGLAGLTARALTSGIGTLDAQGVERFFSDRAAAIDASAGLQSFT
VSITGPARFNADYFAILGEALRSPRFEEKEIRREADNMKAAIRQRSDRPSSYLFSKLNGFLFPGGQPYGYDGLGNAENLD
RFGGKDVRAFWQEQMGQPWVLSIAGDFDREAVLAFARSLPVPRTDIPAPGAPAWGHDKKLDLHLPGRNQAHVLQVFKAVP
PTHEDAPALMLLQAVLSGQSGLLFSQLRDVEGLGYTVTAFYRSMPEAGMMAFYIGTTPDKVEQARKGFGKIIADIKAKPL
SAAQLEAGANRLLGAYFRERQSLGARAADAAGDALLRRPYDFDRQLIEKAATLTPAQVQAVARKYLEQENAYELVLLP
>Mature_878_residues
MRRFFSFAALALLLALACPAIAASDKPAQGDDSGVLTRLPNGLTVYIVKDVRFPLVATRLYVRTGSANEKPDQAGISHLL
EHMVFKGTEHRPKGQVAQDVEALGGYLNAATSFDKTWYMTDMPAAHWRTGMDVVKEMAFQPSLDPKELESEKEVVISELE
GDQDSPMSRLFESLQTSALQNTVYGRPIIGFKDTIRAVTAEDLRAYVRHWYQPQNMLLLVAGDIDPQAVLAYSQKLFGGL
TNNGDLAEPQPVNLADASGGPRVEVIYGPWSKVYMGMAFPVPGLRDLRSVDLDVLCYLLGGDGTSELYRKFKYEKQMVDS
IGMGNMSLSRAGLVYLSAQLDVDKVEPFWRELTRDMAALKAGQFRPEAIERARFNLEDNMDRAGETLNGLASWLGTVQFE
LGGKQAEMNLRFAQRNVDVPQLAQALELWLNPRQARVRVLAPEGAKLPDLEAILQQNWPGPESDQVRKARASKAGEREVV
QLGAGRTLILQPDATVPYVAVDMMLPGGNALLKPDCQGLAGLTARALTSGIGTLDAQGVERFFSDRAAAIDASAGLQSFT
VSITGPARFNADYFAILGEALRSPRFEEKEIRREADNMKAAIRQRSDRPSSYLFSKLNGFLFPGGQPYGYDGLGNAENLD
RFGGKDVRAFWQEQMGQPWVLSIAGDFDREAVLAFARSLPVPRTDIPAPGAPAWGHDKKLDLHLPGRNQAHVLQVFKAVP
PTHEDAPALMLLQAVLSGQSGLLFSQLRDVEGLGYTVTAFYRSMPEAGMMAFYIGTTPDKVEQARKGFGKIIADIKAKPL
SAAQLEAGANRLLGAYFRERQSLGARAADAAGDALLRRPYDFDRQLIEKAATLTPAQVQAVARKYLEQENAYELVLLP

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=355, Percent_Identity=23.943661971831, Blast_Score=100, Evalue=1e-20,
Organism=Homo sapiens, GI46593007, Length=205, Percent_Identity=26.8292682926829, Blast_Score=99, Evalue=2e-20,
Organism=Escherichia coli, GI1787770, Length=211, Percent_Identity=31.2796208530806, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71999683, Length=217, Percent_Identity=27.6497695852535, Blast_Score=103, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17553678, Length=395, Percent_Identity=24.3037974683544, Blast_Score=89, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323192, Length=209, Percent_Identity=30.1435406698565, Blast_Score=107, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321813, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357875, Length=266, Percent_Identity=25.9398496240602, Blast_Score=97, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24646943, Length=266, Percent_Identity=25.9398496240602, Blast_Score=97, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 96359; Mature: 96359

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00143 INSULINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFFSFAALALLLALACPAIAASDKPAQGDDSGVLTRLPNGLTVYIVKDVRFPLVATRL
CCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHEECCCCEEEEEEECCCCHHEEEEE
YVRTGSANEKPDQAGISHLLEHMVFKGTEHRPKGQVAQDVEALGGYLNAATSFDKTWYMT
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
DMPAAHWRTGMDVVKEMAFQPSLDPKELESEKEVVISELEGDQDSPMSRLFESLQTSALQ
CCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NTVYGRPIIGFKDTIRAVTAEDLRAYVRHWYQPQNMLLLVAGDIDPQAVLAYSQKLFGGL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCC
TNNGDLAEPQPVNLADASGGPRVEVIYGPWSKVYMGMAFPVPGLRDLRSVDLDVLCYLLG
CCCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHCCHHHEEEEEC
GDGTSELYRKFKYEKQMVDSIGMGNMSLSRAGLVYLSAQLDVDKVEPFWRELTRDMAALK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHHHHHHHH
AGQFRPEAIERARFNLEDNMDRAGETLNGLASWLGTVQFELGGKQAEMNLRFAQRNVDVP
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHHCCCCHH
QLAQALELWLNPRQARVRVLAPEGAKLPDLEAILQQNWPGPESDQVRKARASKAGEREVV
HHHHHHHHHCCCCHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
QLGAGRTLILQPDATVPYVAVDMMLPGGNALLKPDCQGLAGLTARALTSGIGTLDAQGVE
EECCCCEEEECCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH
RFFSDRAAAIDASAGLQSFTVSITGPARFNADYFAILGEALRSPRFEEKEIRREADNMKA
HHHCCHHHHEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AIRQRSDRPSSYLFSKLNGFLFPGGQPYGYDGLGNAENLDRFGGKDVRAFWQEQMGQPWV
HHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEE
LSIAGDFDREAVLAFARSLPVPRTDIPAPGAPAWGHDKKLDLHLPGRNQAHVLQVFKAVP
EEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCC
PTHEDAPALMLLQAVLSGQSGLLFSQLRDVEGLGYTVTAFYRSMPEAGMMAFYIGTTPDK
CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHH
VEQARKGFGKIIADIKAKPLSAAQLEAGANRLLGAYFRERQSLGARAADAAGDALLRRPY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
DFDRQLIEKAATLTPAQVQAVARKYLEQENAYELVLLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MRRFFSFAALALLLALACPAIAASDKPAQGDDSGVLTRLPNGLTVYIVKDVRFPLVATRL
CCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHEECCCCEEEEEEECCCCHHEEEEE
YVRTGSANEKPDQAGISHLLEHMVFKGTEHRPKGQVAQDVEALGGYLNAATSFDKTWYMT
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
DMPAAHWRTGMDVVKEMAFQPSLDPKELESEKEVVISELEGDQDSPMSRLFESLQTSALQ
CCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NTVYGRPIIGFKDTIRAVTAEDLRAYVRHWYQPQNMLLLVAGDIDPQAVLAYSQKLFGGL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCC
TNNGDLAEPQPVNLADASGGPRVEVIYGPWSKVYMGMAFPVPGLRDLRSVDLDVLCYLLG
CCCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHCCHHHEEEEEC
GDGTSELYRKFKYEKQMVDSIGMGNMSLSRAGLVYLSAQLDVDKVEPFWRELTRDMAALK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHHHHHHHH
AGQFRPEAIERARFNLEDNMDRAGETLNGLASWLGTVQFELGGKQAEMNLRFAQRNVDVP
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHHCCCCHH
QLAQALELWLNPRQARVRVLAPEGAKLPDLEAILQQNWPGPESDQVRKARASKAGEREVV
HHHHHHHHHCCCCHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
QLGAGRTLILQPDATVPYVAVDMMLPGGNALLKPDCQGLAGLTARALTSGIGTLDAQGVE
EECCCCEEEECCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH
RFFSDRAAAIDASAGLQSFTVSITGPARFNADYFAILGEALRSPRFEEKEIRREADNMKA
HHHCCHHHHEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AIRQRSDRPSSYLFSKLNGFLFPGGQPYGYDGLGNAENLDRFGGKDVRAFWQEQMGQPWV
HHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEE
LSIAGDFDREAVLAFARSLPVPRTDIPAPGAPAWGHDKKLDLHLPGRNQAHVLQVFKAVP
EEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCC
PTHEDAPALMLLQAVLSGQSGLLFSQLRDVEGLGYTVTAFYRSMPEAGMMAFYIGTTPDK
CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHH
VEQARKGFGKIIADIKAKPLSAAQLEAGANRLLGAYFRERQSLGARAADAAGDALLRRPY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
DFDRQLIEKAATLTPAQVQAVARKYLEQENAYELVLLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA