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The map label for this gene is dcrA [H]

Identifier: 220904215

GI number: 220904215

Start: 1096777

End: 1098807

Strand: Direct

Name: dcrA [H]

Synonym: Ddes_0942

Alternate gene names: 220904215

Gene position: 1096777-1098807 (Clockwise)

Preceding gene: 220904214

Following gene: 220904216

Centisome position: 38.17

GC content: 54.65

Gene sequence:

>2031_bases
ATGCGTTTGAGCCTTACCCACAAATATGTCGGATCTCTGTTTTCAGCTCTCATTACCTGCTGTGCCGTTGTTCTGTTTGT
ATCCATCTACTATATGAAAAAGCCGATAGATGAAGAACTGAGCAACAGCATACATCGCATGCAGAATATCGTTCACTCCG
CCAATGAGATGACCATACAGCGTTTTGCCCAGAACGCCGCCTTCATTGCCACCAACGACCGGTTGGCCCGGGCCATGGCC
TATAAGGATCACGACGAGGTATTTACCCTTGCTGAAAAGGCCATGAAGATGGCCGGATCGGACTTTATGTCTGTAACAGA
CGCCCAGGGGATCGTTATTGCGCGTGGGCATTCCAAAAGCAAATTCGGCGACAGTATCGCCAAACAGGAAACAGTTGCCA
AAGCCATGCAGGGAGTTCCGGCGCAGGCTGTGGTGACCGGGCCGCTCAATCCATTTACGTTACGCGCATCGCAGCCGGTT
CTTTATGAAGGGCAGCTGGTGGGAACCATCTCGATTGGCGTATCGCTTACCGCTCCTGATTATCTTGACTGGCTGAGCCA
GCTTGCCGGGGCTGCGGTCACCATTTTCAAGGGTGATACGCGCGTCATGACAACCATTGTTTCTGACAGCAAGCGTGCCG
TGGGTACAAAACTGGAGGCGCCGGATGTCATCGACGCCGTACTTGAGCGTGGCGAGACGGTTTTTGTGCAAAATACCATT
CTTGGTGTTCCGTATCAGTCTGCATACTGGCCGGTGAAGGCTGCCGATGGCAAGATTGTGGGCATGTGGTTTACGGGAGC
GCCAATTGGTGAACTGAAAAAACTTGAAAATGAGGCCATTGTCACGGCCGTCAGTGTGGCTGCTGCTTTGCTGCTGGTAC
AGCTGGGCATTTCAGTTTTTGTCGGCTTGCGTGTAAGCGCGCCGGTTCGTAAAATAACCAGTTATGCGCTTGAGGTGGCC
GACGGCAAGCAGGACAGTGTACTCACGGTACGCGGCTCTGATGATATGGGTATGCTCGCCGATGCCTTGCGCAGCATGGA
AAAAAATTTGCGAACACTGGTGTTTGAGGCGGCGGAAAAAGCCAGAGAAGCCGAAAAGTGTGGCGAAGAATGCAAGCTGG
CGATGAATGAGGCAGAGCAGGCCAAGGCAAAGGCGGAGCAGGCCAGGTGCGACGGCATGTCAAGCGCGGCAGCGCGCATC
GAAGAGGTTGCCGTCAAACTCGGCAATTCGGTTTCGGATATTGCCGAGCAGGTGGAAAATACCGATGTCGCCTTGAGCCG
GGCTGTGTCCAGACTTGCCGAAATAGCTTCGGCTATGGAAGAAATGAACTCCACCGTGCTTGCAGTTGCCCGCAATGCTG
GCGGCGCTGCAGATATTTCAGATGCGGCGCGCAATCTGGCAGAAACGGGTTCCAGCGTGGTTTCGCAGGCCGTATCCAGC
ATCCAGCAGGTACAGCAGCAATCGCTGGGCCTCAAGGGCGGCATGACCCTGCTCGATGAGCACGCCAGGGCCATCAGCCG
TATCATGAGCGTCATTTCCGACATTGCCGACCAGACAAACCTGCTGGCCCTCAACGCGGCCATTGAAGCTGCCCGCGCAG
GCGATGCCGGCCGAGGATTTGCCGTTGTGGCCGACGAGGTGCGCAAGCTGGCAGAAAAAACCATGACGTCTACTACGGAT
GTGGGCGATGCCATCCGTGCTATCCAGTCCAGCGCAGCGCAAAGCATTCAGCAGGTAGATGAAGCCGTGAACAATATCTC
TGTAGCTACAGAATATTCCAATAAGTCCGGACAATCACTACAAGAAATCGTGGGCATGGTGGACAAGACCGCTGACGAGG
TGCGCGCCATTGCCACTGCCAGCGAGCAGCAGTCAGCCGTGAGCGACGAGATCAACAAGTCCATCAGCGACGTAAACTAC
CTGACCGGAAACACCTCTGAGTCCATGAAGGTGGCTCTGCGTGAGCTTGATGAACTGCGTCATCAGACACAGAGCCTTAT
GGATCTGGTGGAAGCCCTGAAAAAATCCTGA

Upstream 100 bases:

>100_bases
GTCCTTGTAACAATCTTTATTCTGCAGCGTGTATCTCCAGCGTGTTTTTATAGAGGCAATGAACATATTTTCAATGTGCC
GTAAGCATGAGGAGTGGCAG

Downstream 100 bases:

>100_bases
CCAGCGCCTGGCTTCGGCGGGCCATGAGAGATGCCGCAATTCCGGAACAAGGAATTGCGGCATCTCTGTTTTTCCCCGGC
ATGCCAGCAAAACGTCAATC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MRLSLTHKYVGSLFSALITCCAVVLFVSIYYMKKPIDEELSNSIHRMQNIVHSANEMTIQRFAQNAAFIATNDRLARAMA
YKDHDEVFTLAEKAMKMAGSDFMSVTDAQGIVIARGHSKSKFGDSIAKQETVAKAMQGVPAQAVVTGPLNPFTLRASQPV
LYEGQLVGTISIGVSLTAPDYLDWLSQLAGAAVTIFKGDTRVMTTIVSDSKRAVGTKLEAPDVIDAVLERGETVFVQNTI
LGVPYQSAYWPVKAADGKIVGMWFTGAPIGELKKLENEAIVTAVSVAAALLLVQLGISVFVGLRVSAPVRKITSYALEVA
DGKQDSVLTVRGSDDMGMLADALRSMEKNLRTLVFEAAEKAREAEKCGEECKLAMNEAEQAKAKAEQARCDGMSSAAARI
EEVAVKLGNSVSDIAEQVENTDVALSRAVSRLAEIASAMEEMNSTVLAVARNAGGAADISDAARNLAETGSSVVSQAVSS
IQQVQQQSLGLKGGMTLLDEHARAISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTSTTD
VGDAIRAIQSSAAQSIQQVDEAVNNISVATEYSNKSGQSLQEIVGMVDKTADEVRAIATASEQQSAVSDEINKSISDVNY
LTGNTSESMKVALRELDELRHQTQSLMDLVEALKKS

Sequences:

>Translated_676_residues
MRLSLTHKYVGSLFSALITCCAVVLFVSIYYMKKPIDEELSNSIHRMQNIVHSANEMTIQRFAQNAAFIATNDRLARAMA
YKDHDEVFTLAEKAMKMAGSDFMSVTDAQGIVIARGHSKSKFGDSIAKQETVAKAMQGVPAQAVVTGPLNPFTLRASQPV
LYEGQLVGTISIGVSLTAPDYLDWLSQLAGAAVTIFKGDTRVMTTIVSDSKRAVGTKLEAPDVIDAVLERGETVFVQNTI
LGVPYQSAYWPVKAADGKIVGMWFTGAPIGELKKLENEAIVTAVSVAAALLLVQLGISVFVGLRVSAPVRKITSYALEVA
DGKQDSVLTVRGSDDMGMLADALRSMEKNLRTLVFEAAEKAREAEKCGEECKLAMNEAEQAKAKAEQARCDGMSSAAARI
EEVAVKLGNSVSDIAEQVENTDVALSRAVSRLAEIASAMEEMNSTVLAVARNAGGAADISDAARNLAETGSSVVSQAVSS
IQQVQQQSLGLKGGMTLLDEHARAISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTSTTD
VGDAIRAIQSSAAQSIQQVDEAVNNISVATEYSNKSGQSLQEIVGMVDKTADEVRAIATASEQQSAVSDEINKSISDVNY
LTGNTSESMKVALRELDELRHQTQSLMDLVEALKKS
>Mature_676_residues
MRLSLTHKYVGSLFSALITCCAVVLFVSIYYMKKPIDEELSNSIHRMQNIVHSANEMTIQRFAQNAAFIATNDRLARAMA
YKDHDEVFTLAEKAMKMAGSDFMSVTDAQGIVIARGHSKSKFGDSIAKQETVAKAMQGVPAQAVVTGPLNPFTLRASQPV
LYEGQLVGTISIGVSLTAPDYLDWLSQLAGAAVTIFKGDTRVMTTIVSDSKRAVGTKLEAPDVIDAVLERGETVFVQNTI
LGVPYQSAYWPVKAADGKIVGMWFTGAPIGELKKLENEAIVTAVSVAAALLLVQLGISVFVGLRVSAPVRKITSYALEVA
DGKQDSVLTVRGSDDMGMLADALRSMEKNLRTLVFEAAEKAREAEKCGEECKLAMNEAEQAKAKAEQARCDGMSSAAARI
EEVAVKLGNSVSDIAEQVENTDVALSRAVSRLAEIASAMEEMNSTVLAVARNAGGAADISDAARNLAETGSSVVSQAVSS
IQQVQQQSLGLKGGMTLLDEHARAISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTSTTD
VGDAIRAIQSSAAQSIQQVDEAVNNISVATEYSNKSGQSLQEIVGMVDKTADEVRAIATASEQQSAVSDEINKSISDVNY
LTGNTSESMKVALRELDELRHQTQSLMDLVEALKKS

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=370, Percent_Identity=28.1081081081081, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1788195, Length=345, Percent_Identity=28.4057971014493, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1789453, Length=413, Percent_Identity=23.0024213075061, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788194, Length=211, Percent_Identity=33.175355450237, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1787690, Length=211, Percent_Identity=32.7014218009479, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 72045; Mature: 72045

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSLTHKYVGSLFSALITCCAVVLFVSIYYMKKPIDEELSNSIHRMQNIVHSANEMTIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RFAQNAAFIATNDRLARAMAYKDHDEVFTLAEKAMKMAGSDFMSVTDAQGIVIARGHSKS
HHHCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCCCEEEECCCCCH
KFGDSIAKQETVAKAMQGVPAQAVVTGPLNPFTLRASQPVLYEGQLVGTISIGVSLTAPD
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCEEECCEEEEEEEECEEECCCH
YLDWLSQLAGAAVTIFKGDTRVMTTIVSDSKRAVGTKLEAPDVIDAVLERGETVFVQNTI
HHHHHHHHCCCEEEEEECCCCEEHHHHHCCHHHHCCCCCCCHHHHHHHHCCCEEEEECCE
LGVPYQSAYWPVKAADGKIVGMWFTGAPIGELKKLENEAIVTAVSVAAALLLVQLGISVF
ECCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLRVSAPVRKITSYALEVADGKQDSVLTVRGSDDMGMLADALRSMEKNLRTLVFEAAEK
HHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AREAEKCGEECKLAMNEAEQAKAKAEQARCDGMSSAAARIEEVAVKLGNSVSDIAEQVEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TDVALSRAVSRLAEIASAMEEMNSTVLAVARNAGGAADISDAARNLAETGSSVVSQAVSS
HHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQQVQQQSLGLKGGMTLLDEHARAISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCH
AVVADEVRKLAEKTMTSTTDVGDAIRAIQSSAAQSIQQVDEAVNNISVATEYSNKSGQSL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHH
QEIVGMVDKTADEVRAIATASEQQSAVSDEINKSISDVNYLTGNTSESMKVALRELDELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
HQTQSLMDLVEALKKS
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLSLTHKYVGSLFSALITCCAVVLFVSIYYMKKPIDEELSNSIHRMQNIVHSANEMTIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RFAQNAAFIATNDRLARAMAYKDHDEVFTLAEKAMKMAGSDFMSVTDAQGIVIARGHSKS
HHHCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCCCEEEECCCCCH
KFGDSIAKQETVAKAMQGVPAQAVVTGPLNPFTLRASQPVLYEGQLVGTISIGVSLTAPD
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCEEECCEEEEEEEECEEECCCH
YLDWLSQLAGAAVTIFKGDTRVMTTIVSDSKRAVGTKLEAPDVIDAVLERGETVFVQNTI
HHHHHHHHCCCEEEEEECCCCEEHHHHHCCHHHHCCCCCCCHHHHHHHHCCCEEEEECCE
LGVPYQSAYWPVKAADGKIVGMWFTGAPIGELKKLENEAIVTAVSVAAALLLVQLGISVF
ECCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLRVSAPVRKITSYALEVADGKQDSVLTVRGSDDMGMLADALRSMEKNLRTLVFEAAEK
HHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AREAEKCGEECKLAMNEAEQAKAKAEQARCDGMSSAAARIEEVAVKLGNSVSDIAEQVEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TDVALSRAVSRLAEIASAMEEMNSTVLAVARNAGGAADISDAARNLAETGSSVVSQAVSS
HHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQQVQQQSLGLKGGMTLLDEHARAISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCH
AVVADEVRKLAEKTMTSTTDVGDAIRAIQSSAAQSIQQVDEAVNNISVATEYSNKSGQSL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHH
QEIVGMVDKTADEVRAIATASEQQSAVSDEINKSISDVNYLTGNTSESMKVALRELDELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
HQTQSLMDLVEALKKS
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]