| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904213
Identifier: 220904213
GI number: 220904213
Start: 1094891
End: 1095493
Strand: Direct
Name: 220904213
Synonym: Ddes_0940
Alternate gene names: NA
Gene position: 1094891-1095493 (Clockwise)
Preceding gene: 220904212
Following gene: 220904214
Centisome position: 38.1
GC content: 61.03
Gene sequence:
>603_bases ATGGATTTTTTGCCATTTCCCCTTGCCAGTCTGCTGGCGGGCGCATTCATCACCTTGCTGGGCTTCGTGCTTTTGCTCAA CGTCTTCGGGCTGCCCGCCAACTGGGTGCTGCTGGGACTTGTGGCCCTGTGGAAGATGGCGCATCCCGCTTCGGACGCAA TGAACGTCTGGTTCTGGGTCATGATGATAGCTCTGGCCCTTGTGGGCGAAGCGCTGGAACTGGGCATGCAGATAGTCAAG GCCAAGCGGTATGGCTCAAGTTCGTCAGGCACATTCGCGGGCATGATCGGGGCCATTGCCGGAGCCATTTTACTGGCGCC GCTGTTTTTTGGCCTCGGGGCACTCATTGGCGCGGTGGCTGGCGCATGGACCGGCTGTTTTATTATGGAAATGCTCAAGG GCCGCCCCTTGGGCGAAGCGCTGGATGCGGCCTTTGGGGCTATGATGGGGCGCTTTTTGGGCACAGTGTGCAAGTGCGGT GTTGGCGGGGCCATGCTGGCTCTGGCGGCAAGCCGTATCTGGCCTCAAGTGCCGGCGCAAACACTGCCGGTGGCCTCCGA TCCGCTGCAACTGGTGCTGGCCCTGATCGGAGGCGTGTGCTGA
Upstream 100 bases:
>100_bases CCCAGGGTAGAGCTTGTGCAGAGCAACAGCCTGCCGCGCGCCGAAGGCAAGGCCGTTCGCCTGCAAGACATGCGCGAAAA AAAATAATACCGGAAACTGT
Downstream 100 bases:
>100_bases TATGGCTTCTCTGCTTGACGGGTTGGATATTGTTCTGGTCAAAACACGTTTTCCTGAAAATATCGGTATGGCTGCGCGGG CTTGCGTCAATATGGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MDFLPFPLASLLAGAFITLLGFVLLLNVFGLPANWVLLGLVALWKMAHPASDAMNVWFWVMMIALALVGEALELGMQIVK AKRYGSSSSGTFAGMIGAIAGAILLAPLFFGLGALIGAVAGAWTGCFIMEMLKGRPLGEALDAAFGAMMGRFLGTVCKCG VGGAMLALAASRIWPQVPAQTLPVASDPLQLVLALIGGVC
Sequences:
>Translated_200_residues MDFLPFPLASLLAGAFITLLGFVLLLNVFGLPANWVLLGLVALWKMAHPASDAMNVWFWVMMIALALVGEALELGMQIVK AKRYGSSSSGTFAGMIGAIAGAILLAPLFFGLGALIGAVAGAWTGCFIMEMLKGRPLGEALDAAFGAMMGRFLGTVCKCG VGGAMLALAASRIWPQVPAQTLPVASDPLQLVLALIGGVC >Mature_200_residues MDFLPFPLASLLAGAFITLLGFVLLLNVFGLPANWVLLGLVALWKMAHPASDAMNVWFWVMMIALALVGEALELGMQIVK AKRYGSSSSGTFAGMIGAIAGAILLAPLFFGLGALIGAVAGAWTGCFIMEMLKGRPLGEALDAAFGAMMGRFLGTVCKCG VGGAMLALAASRIWPQVPAQTLPVASDPLQLVLALIGGVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20683; Mature: 20683
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLPFPLASLLAGAFITLLGFVLLLNVFGLPANWVLLGLVALWKMAHPASDAMNVWFWV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH MMIALALVGEALELGMQIVKAKRYGSSSSGTFAGMIGAIAGAILLAPLFFGLGALIGAVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAWTGCFIMEMLKGRPLGEALDAAFGAMMGRFLGTVCKCGVGGAMLALAASRIWPQVPAQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC TLPVASDPLQLVLALIGGVC CCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MDFLPFPLASLLAGAFITLLGFVLLLNVFGLPANWVLLGLVALWKMAHPASDAMNVWFWV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH MMIALALVGEALELGMQIVKAKRYGSSSSGTFAGMIGAIAGAILLAPLFFGLGALIGAVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAWTGCFIMEMLKGRPLGEALDAAFGAMMGRFLGTVCKCGVGGAMLALAASRIWPQVPAQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC TLPVASDPLQLVLALIGGVC CCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA