| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904211
Identifier: 220904211
GI number: 220904211
Start: 1092438
End: 1093493
Strand: Direct
Name: 220904211
Synonym: Ddes_0938
Alternate gene names: NA
Gene position: 1092438-1093493 (Clockwise)
Preceding gene: 220904208
Following gene: 220904212
Centisome position: 38.02
GC content: 61.93
Gene sequence:
>1056_bases ATGGACGAAAACGTACATAAATTTTTGCGTCGCACAGGCCCTGTGCTGTGCCTTGATATCGGCAGCGGTACTCAGGACGC ACTCCTGGCCCGGCCCGGGCTTGAATGTGAAAACTGGCCGCGCTTTGTATTGCCGTCGCCAGCCCGCATGGTTGCCCAGC GCATCCGCGAACTGACCCTGCTGCGACATGACTTGTGGCTGCATGGCAGCAATATGGGCGGCGGCTTCAGCCAGGCCATC AAGGAGCACCTGGCCGCCGGATTCAAGGTGTGGGCTACTCCGGCCGCTTCGCGCGGCATCCACGACAGTGAGGATGTGGT GCGCGCCATGGGGGTGGAGTTTTGTGCCACCTGTCCCGTGGGCTGCGTTCCCGTTTTTCTGTCGGACTACGGACCGGACT TCTGGGCCGGGCTGTTGCGCATTTCCGGTCTGCCGCAACCGCACATGGTGCTTGCGGCCGCCCAGGATCACGGCCATCAT GTAGGGGGCAACCGGCAGGGCAGGATGCTCATGTGGAACCGGCTTCTTGCCGAATCTGCGGATCCGGCATCCTGGATTTA TTCCACGCCGCCCCCATCGCTTACCCGGTTGCAACCTCTGCATGACAAAACCGGTGGCCCTGTGGCCGATACAGGGGCCA GTGCCCTGCTTGGCGCGCTGTGTGACAGCGAGGTCATGAACCGCAGCTACCGTGAGGGCATAACCGTCATAAATGTGGGC AACGGGCATACTGTGGCGGCTCTTGTGTACAAAGGGCTGGTGCGCGGCATTTACGAGCATCATACGGGCATGCGCAACCT GGAGCAGTTGCTGGCTGATCTGGAACAGTTCCGCAAGCATTGGCTGCCCGCTGAAGAAGTGCAGGCCACGGGCGGGCACG GCACGGCCTTTGGTCCATACTGTGAAGAGGCCGGAGGCTATGAGCCTACGTTTATCACAGGGCCAAGGCGCGCCTTGCTG CAAGGCCACGGGCGTTTTTTGGCTCCGCATGGCGACATGATGCTGGCCGGCAGCCTGGGATTGCTGTGGGGCTGGGCGCG TACGCATGCCGATTGA
Upstream 100 bases:
>100_bases GTATTGTGCTGGTCTTGGCAAGCATTTTTTTAAAAAAATTGTCGGGGCTTGCGCTTACGTCGTGTTGCGAGTAACTTCAG GCGCTCACTGGAGACTGCCA
Downstream 100 bases:
>100_bases TCTGCAGGCGCAACCTGCGGCCTGATCCGGTTCGGAGGCTGACCTCCGGAAGTTTTGACAATGCTCCAGTAAGGTGAGGA GAGGCATGGAAGTTTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Pyruvate Formate-Lyase Activating; Actin-Like ATPase; Pyruvate Format-Lyase Activating
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MDENVHKFLRRTGPVLCLDIGSGTQDALLARPGLECENWPRFVLPSPARMVAQRIRELTLLRHDLWLHGSNMGGGFSQAI KEHLAAGFKVWATPAASRGIHDSEDVVRAMGVEFCATCPVGCVPVFLSDYGPDFWAGLLRISGLPQPHMVLAAAQDHGHH VGGNRQGRMLMWNRLLAESADPASWIYSTPPPSLTRLQPLHDKTGGPVADTGASALLGALCDSEVMNRSYREGITVINVG NGHTVAALVYKGLVRGIYEHHTGMRNLEQLLADLEQFRKHWLPAEEVQATGGHGTAFGPYCEEAGGYEPTFITGPRRALL QGHGRFLAPHGDMMLAGSLGLLWGWARTHAD
Sequences:
>Translated_351_residues MDENVHKFLRRTGPVLCLDIGSGTQDALLARPGLECENWPRFVLPSPARMVAQRIRELTLLRHDLWLHGSNMGGGFSQAI KEHLAAGFKVWATPAASRGIHDSEDVVRAMGVEFCATCPVGCVPVFLSDYGPDFWAGLLRISGLPQPHMVLAAAQDHGHH VGGNRQGRMLMWNRLLAESADPASWIYSTPPPSLTRLQPLHDKTGGPVADTGASALLGALCDSEVMNRSYREGITVINVG NGHTVAALVYKGLVRGIYEHHTGMRNLEQLLADLEQFRKHWLPAEEVQATGGHGTAFGPYCEEAGGYEPTFITGPRRALL QGHGRFLAPHGDMMLAGSLGLLWGWARTHAD >Mature_351_residues MDENVHKFLRRTGPVLCLDIGSGTQDALLARPGLECENWPRFVLPSPARMVAQRIRELTLLRHDLWLHGSNMGGGFSQAI KEHLAAGFKVWATPAASRGIHDSEDVVRAMGVEFCATCPVGCVPVFLSDYGPDFWAGLLRISGLPQPHMVLAAAQDHGHH VGGNRQGRMLMWNRLLAESADPASWIYSTPPPSLTRLQPLHDKTGGPVADTGASALLGALCDSEVMNRSYREGITVINVG NGHTVAALVYKGLVRGIYEHHTGMRNLEQLLADLEQFRKHWLPAEEVQATGGHGTAFGPYCEEAGGYEPTFITGPRRALL QGHGRFLAPHGDMMLAGSLGLLWGWARTHAD
Specific function: Unknown
COG id: COG4012
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38194; Mature: 38194
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDENVHKFLRRTGPVLCLDIGSGTQDALLARPGLECENWPRFVLPSPARMVAQRIRELTL CCCHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LRHDLWLHGSNMGGGFSQAIKEHLAAGFKVWATPAASRGIHDSEDVVRAMGVEFCATCPV HHHHHHEECCCCCCHHHHHHHHHHHCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHCCCC GCVPVFLSDYGPDFWAGLLRISGLPQPHMVLAAAQDHGHHVGGNRQGRMLMWNRLLAESA CHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCC DPASWIYSTPPPSLTRLQPLHDKTGGPVADTGASALLGALCDSEVMNRSYREGITVINVG CCCCEEECCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECC NGHTVAALVYKGLVRGIYEHHTGMRNLEQLLADLEQFRKHWLPAEEVQATGGHGTAFGPY CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC CEEAGGYEPTFITGPRRALLQGHGRFLAPHGDMMLAGSLGLLWGWARTHAD HHHCCCCCCEEECCCHHHHHHCCCCEECCCCCEEEECCHHHHHHHHHHCCC >Mature Secondary Structure MDENVHKFLRRTGPVLCLDIGSGTQDALLARPGLECENWPRFVLPSPARMVAQRIRELTL CCCHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LRHDLWLHGSNMGGGFSQAIKEHLAAGFKVWATPAASRGIHDSEDVVRAMGVEFCATCPV HHHHHHEECCCCCCHHHHHHHHHHHCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHCCCC GCVPVFLSDYGPDFWAGLLRISGLPQPHMVLAAAQDHGHHVGGNRQGRMLMWNRLLAESA CHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCC DPASWIYSTPPPSLTRLQPLHDKTGGPVADTGASALLGALCDSEVMNRSYREGITVINVG CCCCEEECCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECC NGHTVAALVYKGLVRGIYEHHTGMRNLEQLLADLEQFRKHWLPAEEVQATGGHGTAFGPY CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC CEEAGGYEPTFITGPRRALLQGHGRFLAPHGDMMLAGSLGLLWGWARTHAD HHHCCCCCCEEECCCHHHHHHCCCCEECCCCCEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA