| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is yeiH [C]
Identifier: 220904203
GI number: 220904203
Start: 1086395
End: 1087504
Strand: Direct
Name: yeiH [C]
Synonym: Ddes_0930
Alternate gene names: 220904203
Gene position: 1086395-1087504 (Clockwise)
Preceding gene: 220904202
Following gene: 220904204
Centisome position: 37.81
GC content: 55.14
Gene sequence:
>1110_bases ATGGAAGACAAAGGATTATTGGGTAAAATTGTGGCCATTATCCCCGGTTTGGTGCTGATGATCGGCACCCTGGCCGTATT GCGCATGTATGCTGTTCCCTGGCTGAACGGCATCACGCTTTTCGGCGTAAAAGGCTGGCCTGTAAAAGTGCTGAGCCTCA ACTATATCTTGCTTTCCATTATTGCGGGCATGCTGTTTCGCAACGTTTTGTTTGGCGGCAAGATTCCCGCGTGGGCGGAT GCGGGCTTTCGCACAACCCGCCTGTTTATTAAAACGGGCGTTATCATGCTGGGTTCGCTGTATACCCTGCAAAGTCTGCT CAAACTGGGTATAAGCGCCGCGCTGCTGATTATGGCTTTTGTGTTCGGCACTGTCTTCCTTATCATGTGGTTGAGTAAAA TATGGAAAGTTGACCGCTCTGTGGCGGCTGTTATGGCGGCGGCCTGCGGCGTGTGCGGGGTTTCTGCGGCGGTGGCGGCA GCCCCCGGTGTGCGCGCCCGTCCTGTGGACCTGGCCCTTGCCATTGCCACGATTCTTGGCTTTGGCATTGTGACGATGTT TATCAGCCCCTTTATCGGTAAAGCGCTCAACCTGTCAGACCTGCAATACGGCGCATGGGTCGGTACGGGCATTCTGAACT CCGGCCAGGTGCTTGCCACCTGCCTGGCATTCAATCCGGTAATTGCTCCGGGAACGGCCGTGGCCTATGGTGAAGTGTGG AACGTGGTGCGCGTCATCAGCATTCCTTTTGTGGTTTTTGCCATCACCGTCTGGTACTGGAAGGGAGAGGGAGAGGCCGA GCACATCAGCCTGAAGGAAATTCTTATTTCCAAGTTCCCCATCTTCGTTTTGGGCTTCTTTGGCATGACGGCCCTGTCTT CTCTGGGTATGCTCGGGGCTGAAGGTTCTGAAACCCTGCACCTTCTGCGCGACTGCATGCAATGGATATTCGGCATCGGC CTTGTTGGGCAGGGGGCGTACATTGACTTCCGTGAAATCAAGGCCGCCGGCGGCAAGCCGTTGCGCCTCGGTCTGACCGC GGGTACCGTAAAATATGTGCTGGCCCTTATCGTCATCATGCTGTTCATGCCCAAAGTAGGCGCGTTCTAA
Upstream 100 bases:
>100_bases TTTGACGTGATATTCACACCAAACAACTATCCTCTTAACCTTTTACCGGATTGTGAAAGAATGTTTGTAACGTAAAACAA CGCTGTGGCGGAGGATGATT
Downstream 100 bases:
>100_bases GCCAAAGGAAGATGCCATGAGTAATGACAAGCAAAAAATGACAGTCTTCAGGAATGACCGGCACGAGGATATCGCTTCGA TTATTTTTGCCGGGCTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MEDKGLLGKIVAIIPGLVLMIGTLAVLRMYAVPWLNGITLFGVKGWPVKVLSLNYILLSIIAGMLFRNVLFGGKIPAWAD AGFRTTRLFIKTGVIMLGSLYTLQSLLKLGISAALLIMAFVFGTVFLIMWLSKIWKVDRSVAAVMAAACGVCGVSAAVAA APGVRARPVDLALAIATILGFGIVTMFISPFIGKALNLSDLQYGAWVGTGILNSGQVLATCLAFNPVIAPGTAVAYGEVW NVVRVISIPFVVFAITVWYWKGEGEAEHISLKEILISKFPIFVLGFFGMTALSSLGMLGAEGSETLHLLRDCMQWIFGIG LVGQGAYIDFREIKAAGGKPLRLGLTAGTVKYVLALIVIMLFMPKVGAF
Sequences:
>Translated_369_residues MEDKGLLGKIVAIIPGLVLMIGTLAVLRMYAVPWLNGITLFGVKGWPVKVLSLNYILLSIIAGMLFRNVLFGGKIPAWAD AGFRTTRLFIKTGVIMLGSLYTLQSLLKLGISAALLIMAFVFGTVFLIMWLSKIWKVDRSVAAVMAAACGVCGVSAAVAA APGVRARPVDLALAIATILGFGIVTMFISPFIGKALNLSDLQYGAWVGTGILNSGQVLATCLAFNPVIAPGTAVAYGEVW NVVRVISIPFVVFAITVWYWKGEGEAEHISLKEILISKFPIFVLGFFGMTALSSLGMLGAEGSETLHLLRDCMQWIFGIG LVGQGAYIDFREIKAAGGKPLRLGLTAGTVKYVLALIVIMLFMPKVGAF >Mature_369_residues MEDKGLLGKIVAIIPGLVLMIGTLAVLRMYAVPWLNGITLFGVKGWPVKVLSLNYILLSIIAGMLFRNVLFGGKIPAWAD AGFRTTRLFIKTGVIMLGSLYTLQSLLKLGISAALLIMAFVFGTVFLIMWLSKIWKVDRSVAAVMAAACGVCGVSAAVAA APGVRARPVDLALAIATILGFGIVTMFISPFIGKALNLSDLQYGAWVGTGILNSGQVLATCLAFNPVIAPGTAVAYGEVW NVVRVISIPFVVFAITVWYWKGEGEAEHISLKEILISKFPIFVLGFFGMTALSSLGMLGAEGSETLHLLRDCMQWIFGIG LVGQGAYIDFREIKAAGGKPLRLGLTAGTVKYVLALIVIMLFMPKVGAF
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 39367; Mature: 39367
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKGLLGKIVAIIPGLVLMIGTLAVLRMYAVPWLNGITLFGVKGWPVKVLSLNYILLSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH IAGMLFRNVLFGGKIPAWADAGFRTTRLFIKTGVIMLGSLYTLQSLLKLGISAALLIMAF HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGTVFLIMWLSKIWKVDRSVAAVMAAACGVCGVSAAVAAAPGVRARPVDLALAIATILG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FGIVTMFISPFIGKALNLSDLQYGAWVGTGILNSGQVLATCLAFNPVIAPGTAVAYGEVW HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH NVVRVISIPFVVFAITVWYWKGEGEAEHISLKEILISKFPIFVLGFFGMTALSSLGMLGA HHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGSETLHLLRDCMQWIFGIGLVGQGAYIDFREIKAAGGKPLRLGLTAGTVKYVLALIVIM CCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCEEEEECHHHHHHHHHHHHHH LFMPKVGAF HHHHHCCCC >Mature Secondary Structure MEDKGLLGKIVAIIPGLVLMIGTLAVLRMYAVPWLNGITLFGVKGWPVKVLSLNYILLSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH IAGMLFRNVLFGGKIPAWADAGFRTTRLFIKTGVIMLGSLYTLQSLLKLGISAALLIMAF HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGTVFLIMWLSKIWKVDRSVAAVMAAACGVCGVSAAVAAAPGVRARPVDLALAIATILG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FGIVTMFISPFIGKALNLSDLQYGAWVGTGILNSGQVLATCLAFNPVIAPGTAVAYGEVW HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH NVVRVISIPFVVFAITVWYWKGEGEAEHISLKEILISKFPIFVLGFFGMTALSSLGMLGA HHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGSETLHLLRDCMQWIFGIGLVGQGAYIDFREIKAAGGKPLRLGLTAGTVKYVLALIVIM CCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCEEEEECHHHHHHHHHHHHHH LFMPKVGAF HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA