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The map label for this gene is ygcI [C]

Identifier: 220904200

GI number: 220904200

Start: 1081803

End: 1082552

Strand: Direct

Name: ygcI [C]

Synonym: Ddes_0927

Alternate gene names: 220904200

Gene position: 1081803-1082552 (Clockwise)

Preceding gene: 220904199

Following gene: 220904201

Centisome position: 37.65

GC content: 57.07

Gene sequence:

>750_bases
ATGTGCGCTGACGTTTGCTGCCTTGCCCTGCGCTTGCAGGCCCCCATGCTCTCGTTTGGCAATGAAAGCCGGTTTAACCG
CAGGTGTACAGCTTCTTTGCCTTCAAAAAGCGTGGTGGCTGGTATGCTGTGCGCGGCCAAAGGACTGCACAGGGGCAGTG
TAGAGGAACAGGCCTTTCTACAGCAGGTCGCAGCCATACCCATGCTGTCGGTAGCCATACCGCGATGCTTGTCTGCCAAT
GGCAAGGACTGGCTTTTGGCCGCTGGCCGTACGGTGGACTTTCACACTGTTCAGGGCACTCGTAAAGCTGCGGGCGGCAT
CAAGGATTGCCACATCACCACGCGGCACTACCTGCACGACAGTTCTTTTGCCGTGTTTCTCAACGGCCCGTACAGGGTAC
TCGAGGATGCTGCCAGGGCTTTGCAAAATCCGGTGTGGGGGCTTTGGATAGGCCGCAAGTGCTGCATACCCAGTGCTCCT
GTATTTGGCGGACTGTTTTCCAGCGAGGCCGTGGCATTAAACCATATGCTGGATGCTCCGTTGGAATTCTTTACCCATGA
GCGGGAGGTGCACAGCTTTGAAGACGGTAACGACACGGTGCCTGACCAGGCGGAAAGTTTTCTTTCTGCCGCTCGCCGGT
TTGCTCCCCGACGTGTCCTGCGGGTGCGCGCACGGGTGCATGGCGTACAGCGTGAAGATGTAGAAGAAAAACAGCAACAG
GCGGTAATGACTGATGCGCCTGATGTCTGA

Upstream 100 bases:

>100_bases
GAATACCAGCGCCTGGAAAACACCTGGGGCCTTACGGCGGTGGAAACCATCCGCATGCCACTGCAGAGCCTTGGCGAACT
CTTGCAGGGGGTGCGGCGGC

Downstream 100 bases:

>100_bases
AACCGTGCCTCTTAAAGAAAGAAACTCCATGCTCTTTCTCAAGTATGGGCGCATTGATGTTGAGGACGGGGCATTTGTAT
TGGTAGACGCAACGGGCGTG

Product: CRISPR-associated protein Cas5 family

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Family Protein; CRISPR-Associated Cse5e Family Protein; CRISPR-Associated Protein CT; CRISPR-Associated Subtype; CRISPR-Associated Ecoli Subtype; CRISPR-Associated Cas5e Family Protein

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MCADVCCLALRLQAPMLSFGNESRFNRRCTASLPSKSVVAGMLCAAKGLHRGSVEEQAFLQQVAAIPMLSVAIPRCLSAN
GKDWLLAAGRTVDFHTVQGTRKAAGGIKDCHITTRHYLHDSSFAVFLNGPYRVLEDAARALQNPVWGLWIGRKCCIPSAP
VFGGLFSSEAVALNHMLDAPLEFFTHEREVHSFEDGNDTVPDQAESFLSAARRFAPRRVLRVRARVHGVQREDVEEKQQQ
AVMTDAPDV

Sequences:

>Translated_249_residues
MCADVCCLALRLQAPMLSFGNESRFNRRCTASLPSKSVVAGMLCAAKGLHRGSVEEQAFLQQVAAIPMLSVAIPRCLSAN
GKDWLLAAGRTVDFHTVQGTRKAAGGIKDCHITTRHYLHDSSFAVFLNGPYRVLEDAARALQNPVWGLWIGRKCCIPSAP
VFGGLFSSEAVALNHMLDAPLEFFTHEREVHSFEDGNDTVPDQAESFLSAARRFAPRRVLRVRARVHGVQREDVEEKQQQ
AVMTDAPDV
>Mature_249_residues
MCADVCCLALRLQAPMLSFGNESRFNRRCTASLPSKSVVAGMLCAAKGLHRGSVEEQAFLQQVAAIPMLSVAIPRCLSAN
GKDWLLAAGRTVDFHTVQGTRKAAGGIKDCHITTRHYLHDSSFAVFLNGPYRVLEDAARALQNPVWGLWIGRKCCIPSAP
VFGGLFSSEAVALNHMLDAPLEFFTHEREVHSFEDGNDTVPDQAESFLSAARRFAPRRVLRVRARVHGVQREDVEEKQQQ
AVMTDAPDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27374; Mature: 27374

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCADVCCLALRLQAPMLSFGNESRFNRRCTASLPSKSVVAGMLCAAKGLHRGSVEEQAFL
CCHHHHHHHHHHHCHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
QQVAAIPMLSVAIPRCLSANGKDWLLAAGRTVDFHTVQGTRKAAGGIKDCHITTRHYLHD
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCHHHHCCCCCCEEHHHHHCCC
SSFAVFLNGPYRVLEDAARALQNPVWGLWIGRKCCIPSAPVFGGLFSSEAVALNHMLDAP
CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
LEFFTHEREVHSFEDGNDTVPDQAESFLSAARRFAPRRVLRVRARVHGVQREDVEEKQQQ
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVMTDAPDV
HHCCCCCCC
>Mature Secondary Structure
MCADVCCLALRLQAPMLSFGNESRFNRRCTASLPSKSVVAGMLCAAKGLHRGSVEEQAFL
CCHHHHHHHHHHHCHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
QQVAAIPMLSVAIPRCLSANGKDWLLAAGRTVDFHTVQGTRKAAGGIKDCHITTRHYLHD
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCHHHHCCCCCCEEHHHHHCCC
SSFAVFLNGPYRVLEDAARALQNPVWGLWIGRKCCIPSAPVFGGLFSSEAVALNHMLDAP
CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
LEFFTHEREVHSFEDGNDTVPDQAESFLSAARRFAPRRVLRVRARVHGVQREDVEEKQQQ
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVMTDAPDV
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA