| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904171
Identifier: 220904171
GI number: 220904171
Start: 1047228
End: 1047812
Strand: Direct
Name: 220904171
Synonym: Ddes_0898
Alternate gene names: NA
Gene position: 1047228-1047812 (Clockwise)
Preceding gene: 220904165
Following gene: 220904172
Centisome position: 36.45
GC content: 61.88
Gene sequence:
>585_bases ATGGACCCACAGCATCTTATTGATCATCTTGGCCTTGTTCCGCATCCGGAGGGCGGCTATTACCGCCGCACGTACTGTTG CGGCCACACGCTTGCAGCGCAGGATCTGCCTTGTGGTTTTGACCGGCCCCGTCCCGTATCCACAGCCATTCTTTTTTTAT TGCGGGCAGGGCAGTATTCGCGTCTGCACCGTATACGGCAGGACGAACTGTGGCACTTTCATCTGGGCGGTCCCTTGCGG CTGGCATGGATAGACCGGGACGGGCGCTCTCATGAGACGCTTCTCGGCCCGGAAATTCTGAACGGCCAGGTTTTGCAGTG GGCCGTGCCTGGCGGCTGCTGGTTCGGCGCGACACCTGCGCCGGGGTCAGCCTGCTCGCTGGTGGGCTGCACCGTGGCTC CCGGTTTTGATTTCAGTGATTTGTGCTTCGGCAGCCGTAACGAACTGGAGAGGCGCTATCCCCTGGCTCTGGACTGCATC CGCGAGTTTTGCCCTTCTGATGCCGCACAGGCTCCGCACCTCGGCCATATGGAGGGCGCCTCCTGCGGTGGCTCCGGCCT TCGGACGGATGGGGACCGTTCATGA
Upstream 100 bases:
>100_bases GCATACACGGCTCTTTTAGATGAGCCTGCCTTATGCCCGGTTCGGTTTTTTCCCCTGACAAGCTCTTCCCTAAGAAAGGC GCAGCGGCTACACTGCCCGC
Downstream 100 bases:
>100_bases GCCGCTACCCCGTTCCCGCTTCCACTGCCGCAGAGCCGCATTGCACAGAGCTTGTCATACGGCGCAGCCGTTTCCTTGCC CTGTGCGCCCACACCCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MDPQHLIDHLGLVPHPEGGYYRRTYCCGHTLAAQDLPCGFDRPRPVSTAILFLLRAGQYSRLHRIRQDELWHFHLGGPLR LAWIDRDGRSHETLLGPEILNGQVLQWAVPGGCWFGATPAPGSACSLVGCTVAPGFDFSDLCFGSRNELERRYPLALDCI REFCPSDAAQAPHLGHMEGASCGGSGLRTDGDRS
Sequences:
>Translated_194_residues MDPQHLIDHLGLVPHPEGGYYRRTYCCGHTLAAQDLPCGFDRPRPVSTAILFLLRAGQYSRLHRIRQDELWHFHLGGPLR LAWIDRDGRSHETLLGPEILNGQVLQWAVPGGCWFGATPAPGSACSLVGCTVAPGFDFSDLCFGSRNELERRYPLALDCI REFCPSDAAQAPHLGHMEGASCGGSGLRTDGDRS >Mature_194_residues MDPQHLIDHLGLVPHPEGGYYRRTYCCGHTLAAQDLPCGFDRPRPVSTAILFLLRAGQYSRLHRIRQDELWHFHLGGPLR LAWIDRDGRSHETLLGPEILNGQVLQWAVPGGCWFGATPAPGSACSLVGCTVAPGFDFSDLCFGSRNELERRYPLALDCI REFCPSDAAQAPHLGHMEGASCGGSGLRTDGDRS
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21278; Mature: 21278
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPQHLIDHLGLVPHPEGGYYRRTYCCGHTLAAQDLPCGFDRPRPVSTAILFLLRAGQYS CCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH RLHRIRQDELWHFHLGGPLRLAWIDRDGRSHETLLGPEILNGQVLQWAVPGGCWFGATPA HHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCEECCCCC PGSACSLVGCTVAPGFDFSDLCFGSRNELERRYPLALDCIREFCPSDAAQAPHLGHMEGA CCCCEEEEEEECCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC SCGGSGLRTDGDRS CCCCCCCCCCCCCC >Mature Secondary Structure MDPQHLIDHLGLVPHPEGGYYRRTYCCGHTLAAQDLPCGFDRPRPVSTAILFLLRAGQYS CCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH RLHRIRQDELWHFHLGGPLRLAWIDRDGRSHETLLGPEILNGQVLQWAVPGGCWFGATPA HHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCEECCCCC PGSACSLVGCTVAPGFDFSDLCFGSRNELERRYPLALDCIREFCPSDAAQAPHLGHMEGA CCCCEEEEEEECCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC SCGGSGLRTDGDRS CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA