| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904161
Identifier: 220904161
GI number: 220904161
Start: 1035974
End: 1036645
Strand: Reverse
Name: 220904161
Synonym: Ddes_0888
Alternate gene names: NA
Gene position: 1036645-1035974 (Counterclockwise)
Preceding gene: 220904162
Following gene: 220904160
Centisome position: 36.08
GC content: 57.59
Gene sequence:
>672_bases ATGATCCCTGACCTGACCGCTATTTTCACCCGCTACGAAAGCCTGCGGGCCGAGGCCGACGCCCTGTTTGAACGGGTGCG CGACAGCTATCCCCAGTGCGTGACCTGTAAGGAAGGCTGCAGCGACTGCTGCCACGCCATGTTTGACCTTTCGCTGGTGG AAGCCATGTATATCAACCGGGCCTTTAACGCCACTTTCGGGCATGGTCCCGAGCGCTCGGCCATACTGGAACGCGCTTCA GAACTTGACCGCCACACCACCCGTCTCAAGCGCGAACTGTACAGGGCAGAAAAAGACGGCGAAAGCCCCGAAGATATCCT GAGCATCGCCGCCAAGGTCAAAATGCGCTGCCCTTTGCTGGACGACGCGGACCGTTGCCTTCTTTATGAAGCACGGCCCG TCACCTGCCGCATTTATGGCGTGCCTACGGCTATCCGTGGTCAGGGCCATGTTTGCGGTTTTTCCGCCTTTGAAAAAGGC AAGGCCTACCCCACCGTACATATGGACAAAATGTATGACAGGCTCGAAGGACTGAGCAAGGACATCGCAACCACGGTGCA GTCACGCTTCAAGGAACTGCACGAGGTGTATGTACCGCTGTCCATGGCCCTGCTGACCCGTTATGACGAAAGCTATCTCG GCATTGGGCCGGCCAAGAAAGAACAGGCCTGA
Upstream 100 bases:
>100_bases GGGCCACAAGCGCACGGGCAAGACGCAAAGCCCGAAAAAACCGCCCCGCCGCACACCTGCCGGACGGCCCATACGCCTTC CGCACAGCCACAGGAAAGCC
Downstream 100 bases:
>100_bases TACAAAACGGCGCAGCACTGTATTTTGCCGGGGCTGACACAGCCGCAACCGCCCGTGCGCGCGGGGGCGTGGCGGCGGCG CGGGCCTCACAGGGCCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MIPDLTAIFTRYESLRAEADALFERVRDSYPQCVTCKEGCSDCCHAMFDLSLVEAMYINRAFNATFGHGPERSAILERAS ELDRHTTRLKRELYRAEKDGESPEDILSIAAKVKMRCPLLDDADRCLLYEARPVTCRIYGVPTAIRGQGHVCGFSAFEKG KAYPTVHMDKMYDRLEGLSKDIATTVQSRFKELHEVYVPLSMALLTRYDESYLGIGPAKKEQA
Sequences:
>Translated_223_residues MIPDLTAIFTRYESLRAEADALFERVRDSYPQCVTCKEGCSDCCHAMFDLSLVEAMYINRAFNATFGHGPERSAILERAS ELDRHTTRLKRELYRAEKDGESPEDILSIAAKVKMRCPLLDDADRCLLYEARPVTCRIYGVPTAIRGQGHVCGFSAFEKG KAYPTVHMDKMYDRLEGLSKDIATTVQSRFKELHEVYVPLSMALLTRYDESYLGIGPAKKEQA >Mature_223_residues MIPDLTAIFTRYESLRAEADALFERVRDSYPQCVTCKEGCSDCCHAMFDLSLVEAMYINRAFNATFGHGPERSAILERAS ELDRHTTRLKRELYRAEKDGESPEDILSIAAKVKMRCPLLDDADRCLLYEARPVTCRIYGVPTAIRGQGHVCGFSAFEKG KAYPTVHMDKMYDRLEGLSKDIATTVQSRFKELHEVYVPLSMALLTRYDESYLGIGPAKKEQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25249; Mature: 25249
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPDLTAIFTRYESLRAEADALFERVRDSYPQCVTCKEGCSDCCHAMFDLSLVEAMYINR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH AFNATFGHGPERSAILERASELDRHTTRLKRELYRAEKDGESPEDILSIAAKVKMRCPLL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC DDADRCLLYEARPVTCRIYGVPTAIRGQGHVCGFSAFEKGKAYPTVHMDKMYDRLEGLSK CCCCCEEEEECCCCEEEEEECCEEECCCCCEECHHHHHCCCCCCCCHHHHHHHHHHHHHH DIATTVQSRFKELHEVYVPLSMALLTRYDESYLGIGPAKKEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIPDLTAIFTRYESLRAEADALFERVRDSYPQCVTCKEGCSDCCHAMFDLSLVEAMYINR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH AFNATFGHGPERSAILERASELDRHTTRLKRELYRAEKDGESPEDILSIAAKVKMRCPLL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC DDADRCLLYEARPVTCRIYGVPTAIRGQGHVCGFSAFEKGKAYPTVHMDKMYDRLEGLSK CCCCCEEEEECCCCEEEEEECCEEECCCCCEECHHHHHCCCCCCCCHHHHHHHHHHHHHH DIATTVQSRFKELHEVYVPLSMALLTRYDESYLGIGPAKKEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA