Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904151

Identifier: 220904151

GI number: 220904151

Start: 1027082

End: 1027768

Strand: Direct

Name: 220904151

Synonym: Ddes_0878

Alternate gene names: NA

Gene position: 1027082-1027768 (Clockwise)

Preceding gene: 220904146

Following gene: 220904154

Centisome position: 35.74

GC content: 59.83

Gene sequence:

>687_bases
ATGAAAAAAGACAATCGTTCCTTCCGTTTTTTACCGTTGATTCTGATTATGGCCGGGCTGCTGGCTGCCTGCATTGCATC
CGGCCCGCAGAAGACATTGAAAGATATGGCAGAAGCCCTGAAAAAAAATGACAGCGCGGCTTTTCTTGCCCAGGTTGACC
TCAAAAGCTTTGCCGCCAACGAAGTCAAAAACATGACCCGCGAAGACGCGCCGCTGGGGCTGCTGGACAGCCTGGGCCGT
TCGCTGGGCATCGGTGGCGTAGATCAGTTGATCGGCAGTATTGTGGATATGGAGGCACGCCTTCAGGGCCACTTTAACCG
TGGCGTCAGCACGGGTGAACTGATGGCCCAGTGCCGCGAGGCGCAGACGCCCGACTGCCCCTGGGTGCCGGAAAGCCTGG
CTGATGCCAAGGTGACGGAAATCGGCCCCAATGCCGCCGTGGCCCAGGTAACCACCCCTGCCCGCATGACAAGCTGGCTT
GCGCTGCGCAAGGTCGGTGAAAAGTGGCAGGTGGTAGGGCAGGCGGTGATGGAAAGCACGGCCCGGCAGTATGCAGCAGG
TTCCGGTGCGCCGGCCCCGGAAAAGCCCGCGCCCCAGACCCCGGCACCCCAGAAGCCCGCTCCTGAAAAAACTGTTCCGG
ATCAGGACAACAGGGCAGGCAACAATCAGGGTGTAAGCAGAATCTGA

Upstream 100 bases:

>100_bases
CCCCGCAGCCTTCCTGTCCCCCCTTTGCATAGGCGCGTGTGAAGGGGTATAAGAAATTACGGCGTCTGTATGCATGCTTC
GCCTTTACCAAGGGGTATAT

Downstream 100 bases:

>100_bases
AGCAGTGCTCTGGGGTTTGCCCCTTTTTGATCTGTAAAAATCGCATGCCGGATGGTGTTGTACCTCCGGCATGCGATTTT
ATTTGGGCAGATTCGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKDNRSFRFLPLILIMAGLLAACIASGPQKTLKDMAEALKKNDSAAFLAQVDLKSFAANEVKNMTREDAPLGLLDSLGR
SLGIGGVDQLIGSIVDMEARLQGHFNRGVSTGELMAQCREAQTPDCPWVPESLADAKVTEIGPNAAVAQVTTPARMTSWL
ALRKVGEKWQVVGQAVMESTARQYAAGSGAPAPEKPAPQTPAPQKPAPEKTVPDQDNRAGNNQGVSRI

Sequences:

>Translated_228_residues
MKKDNRSFRFLPLILIMAGLLAACIASGPQKTLKDMAEALKKNDSAAFLAQVDLKSFAANEVKNMTREDAPLGLLDSLGR
SLGIGGVDQLIGSIVDMEARLQGHFNRGVSTGELMAQCREAQTPDCPWVPESLADAKVTEIGPNAAVAQVTTPARMTSWL
ALRKVGEKWQVVGQAVMESTARQYAAGSGAPAPEKPAPQTPAPQKPAPEKTVPDQDNRAGNNQGVSRI
>Mature_228_residues
MKKDNRSFRFLPLILIMAGLLAACIASGPQKTLKDMAEALKKNDSAAFLAQVDLKSFAANEVKNMTREDAPLGLLDSLGR
SLGIGGVDQLIGSIVDMEARLQGHFNRGVSTGELMAQCREAQTPDCPWVPESLADAKVTEIGPNAAVAQVTTPARMTSWL
ALRKVGEKWQVVGQAVMESTARQYAAGSGAPAPEKPAPQTPAPQKPAPEKTVPDQDNRAGNNQGVSRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24244; Mature: 24244

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDNRSFRFLPLILIMAGLLAACIASGPQKTLKDMAEALKKNDSAAFLAQVDLKSFAAN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EVKNMTREDAPLGLLDSLGRSLGIGGVDQLIGSIVDMEARLQGHFNRGVSTGELMAQCRE
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AQTPDCPWVPESLADAKVTEIGPNAAVAQVTTPARMTSWLALRKVGEKWQVVGQAVMEST
CCCCCCCCCCHHHHCCHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQYAAGSGAPAPEKPAPQTPAPQKPAPEKTVPDQDNRAGNNQGVSRI
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKDNRSFRFLPLILIMAGLLAACIASGPQKTLKDMAEALKKNDSAAFLAQVDLKSFAAN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EVKNMTREDAPLGLLDSLGRSLGIGGVDQLIGSIVDMEARLQGHFNRGVSTGELMAQCRE
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AQTPDCPWVPESLADAKVTEIGPNAAVAQVTTPARMTSWLALRKVGEKWQVVGQAVMEST
CCCCCCCCCCHHHHCCHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQYAAGSGAPAPEKPAPQTPAPQKPAPEKTVPDQDNRAGNNQGVSRI
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA