| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904085
Identifier: 220904085
GI number: 220904085
Start: 950720
End: 951859
Strand: Direct
Name: 220904085
Synonym: Ddes_0811
Alternate gene names: NA
Gene position: 950720-951859 (Clockwise)
Preceding gene: 220904084
Following gene: 220904086
Centisome position: 33.09
GC content: 60.0
Gene sequence:
>1140_bases ATGGCCTGTGTTTTTCGTGAAGATTCCGCAAGGGTTGCAAGAAGCCATATGGCAAAGCTCCTGTTGTTGCCTGTCATACT TATGCTGTGTTTCGCCGCGCCGTTGACGGCGCTGGCCCAGGATGCCGCTGGTGGTGCAGAACAGGGCCAGGCTGCGGTTG TTGATGCGCAGTCTGCGCCGTCGGCCTTGCAGGAGCCTGGACAGACGGTACAGCAGGCGCCCGGCCAGGCCGGTGATCCG CTGCTCACCCAGACCCAGCGGCAGGCAGACGCCCAGGCGGATGCCGCTCTGGTGGACAATCATCCCTGGTGGTTCTGGCC CATCGCTCTGCTGGTTTTTTGTTTTATTCTCGGCATTATTGCCGTTATGGCCGGTGTGGGCGGCGGCGTGCTTTTTGTGC CGCTGGTCAGCGGTTTTTTTCCTTTCCATCTGGACTTTGTGCGCGGCGCGGGCCTGCTGGTGGCTCTGGCGGGCGCGCTG GCAGCCGGGCCGGGCTTGCTGCGCCGTAATTTCGCCAACCTGCGGCTGGCTCTGCCCGTAGCGCTTATTGCTTCGGCCTG TGCCATTGTGGGAGCCATGCTGGGCCTGGCCCTGCCCACGCACGTTATCCAGACCTGCCTTGGCGCGACCATTCTGGCCA TTGCCGTACTTTTGCTGCTTTCTAAAAATTCTGTGCGTCCTGTAGTGACAAAGCAGGATGCCGTGGGCCTGGCCCTCGGT ATGAACGGCGTATTTCTTGAGCCAAGCACCGGCGAGGTGGTGGAGTGGAAAACCCACCGCACTGTTGCCGGACTGCTGCT CTTTATTGTCATCGGCATCATGGCGGGCATGTTCGGCCTTGGGGCCGGGTGGGCCAACGTGCCGGTGCTCAACCTGCTTA TGGGCGCTCCCCTCAAGGTGAGCGTGGGTACGTCCAAGTTTCTTCTTTCCATCACAGATACTTCCGCCGCCTGGGTTTAT CTCAATCAGGGCTGCGTCATCCCCCTCATGGCCATTCCGTCCATTGTAGGACTTATGCTCGGCTCTGTGGTGGGTGTGCG CCTGCTGGCCGTCGCCAAGCCCAAATTCATCCGTTATATGGTGATTTTTGTGCTCCTTTTTTCCGGCGCCAAAGCCCTCA TGAAGGGACTTGGCTGGTAA
Upstream 100 bases:
>100_bases ACAAATCAGGATTCTCCCGATGGCGTGTGCCGGACATGAATTTTAGTCTTGCCCTGACCGAAAAAACAAATGCGCCGGTC TGAGGCGCAAGGGGGAGACG
Downstream 100 bases:
>100_bases ATTTCCTGACCGGACTGGACTTTTTGGGAGGATAGTATGAATACTGTGGATGTTAAGAACGATATCAAGGCTTCTCCGGC GCAGGTGCGCTATGCCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MACVFREDSARVARSHMAKLLLLPVILMLCFAAPLTALAQDAAGGAEQGQAAVVDAQSAPSALQEPGQTVQQAPGQAGDP LLTQTQRQADAQADAALVDNHPWWFWPIALLVFCFILGIIAVMAGVGGGVLFVPLVSGFFPFHLDFVRGAGLLVALAGAL AAGPGLLRRNFANLRLALPVALIASACAIVGAMLGLALPTHVIQTCLGATILAIAVLLLLSKNSVRPVVTKQDAVGLALG MNGVFLEPSTGEVVEWKTHRTVAGLLLFIVIGIMAGMFGLGAGWANVPVLNLLMGAPLKVSVGTSKFLLSITDTSAAWVY LNQGCVIPLMAIPSIVGLMLGSVVGVRLLAVAKPKFIRYMVIFVLLFSGAKALMKGLGW
Sequences:
>Translated_379_residues MACVFREDSARVARSHMAKLLLLPVILMLCFAAPLTALAQDAAGGAEQGQAAVVDAQSAPSALQEPGQTVQQAPGQAGDP LLTQTQRQADAQADAALVDNHPWWFWPIALLVFCFILGIIAVMAGVGGGVLFVPLVSGFFPFHLDFVRGAGLLVALAGAL AAGPGLLRRNFANLRLALPVALIASACAIVGAMLGLALPTHVIQTCLGATILAIAVLLLLSKNSVRPVVTKQDAVGLALG MNGVFLEPSTGEVVEWKTHRTVAGLLLFIVIGIMAGMFGLGAGWANVPVLNLLMGAPLKVSVGTSKFLLSITDTSAAWVY LNQGCVIPLMAIPSIVGLMLGSVVGVRLLAVAKPKFIRYMVIFVLLFSGAKALMKGLGW >Mature_378_residues ACVFREDSARVARSHMAKLLLLPVILMLCFAAPLTALAQDAAGGAEQGQAAVVDAQSAPSALQEPGQTVQQAPGQAGDPL LTQTQRQADAQADAALVDNHPWWFWPIALLVFCFILGIIAVMAGVGGGVLFVPLVSGFFPFHLDFVRGAGLLVALAGALA AGPGLLRRNFANLRLALPVALIASACAIVGAMLGLALPTHVIQTCLGATILAIAVLLLLSKNSVRPVVTKQDAVGLALGM NGVFLEPSTGEVVEWKTHRTVAGLLLFIVIGIMAGMFGLGAGWANVPVLNLLMGAPLKVSVGTSKFLLSITDTSAAWVYL NQGCVIPLMAIPSIVGLMLGSVVGVRLLAVAKPKFIRYMVIFVLLFSGAKALMKGLGW
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39384; Mature: 39253
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACVFREDSARVARSHMAKLLLLPVILMLCFAAPLTALAQDAAGGAEQGQAAVVDAQSAP CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC SALQEPGQTVQQAPGQAGDPLLTQTQRQADAQADAALVDNHPWWFWPIALLVFCFILGII HHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHH AVMAGVGGGVLFVPLVSGFFPFHLDFVRGAGLLVALAGALAAGPGLLRRNFANLRLALPV HHHHCCCCCHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALIASACAIVGAMLGLALPTHVIQTCLGATILAIAVLLLLSKNSVRPVVTKQDAVGLALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEC MNGVFLEPSTGEVVEWKTHRTVAGLLLFIVIGIMAGMFGLGAGWANVPVLNLLMGAPLKV CCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEE SVGTSKFLLSITDTSAAWVYLNQGCVIPLMAIPSIVGLMLGSVVGVRLLAVAKPKFIRYM EECCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VIFVLLFSGAKALMKGLGW HHHHHHHHCHHHHHHCCCC >Mature Secondary Structure ACVFREDSARVARSHMAKLLLLPVILMLCFAAPLTALAQDAAGGAEQGQAAVVDAQSAP CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC SALQEPGQTVQQAPGQAGDPLLTQTQRQADAQADAALVDNHPWWFWPIALLVFCFILGII HHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHH AVMAGVGGGVLFVPLVSGFFPFHLDFVRGAGLLVALAGALAAGPGLLRRNFANLRLALPV HHHHCCCCCHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALIASACAIVGAMLGLALPTHVIQTCLGATILAIAVLLLLSKNSVRPVVTKQDAVGLALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEC MNGVFLEPSTGEVVEWKTHRTVAGLLLFIVIGIMAGMFGLGAGWANVPVLNLLMGAPLKV CCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEE SVGTSKFLLSITDTSAAWVYLNQGCVIPLMAIPSIVGLMLGSVVGVRLLAVAKPKFIRYM EECCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VIFVLLFSGAKALMKGLGW HHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA