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The map label for this gene is yfiH [H]

Identifier: 220904068

GI number: 220904068

Start: 931426

End: 932184

Strand: Direct

Name: yfiH [H]

Synonym: Ddes_0794

Alternate gene names: 220904068

Gene position: 931426-932184 (Clockwise)

Preceding gene: 220904067

Following gene: 220904070

Centisome position: 32.42

GC content: 58.89

Gene sequence:

>759_bases
GTGTCCATAAGCTATATTCCTTTCATGTTTCCGGGCTTGAATTCCGTCCGCTGTGTATTTCAGACCCGTCCAGGCGGCGC
TTGCCTGGGTGAGTACGGCGGGGGCAATATTTCTTTCAGCGTTGGTGATGACGCAGCTCATGTGGCGGCCAATCGCCGTG
ACTTGCTGGCGTCTTTGAAAGCTCAGGGCTTGAGCCAATGGGCCGAACTGTCCCAGGTGCATGGCCATGTGATGGTTTTT
GAGCCGCAGCCTGTAGCCTGTGATGCCGCGCCTGCCGAAGAAGGCGACGGCATGGCTACTGCGCGGCCCGGCATGGGCCT
GTTTATCAAAACGGCAGACTGCCAGCCCATTCTTCTGGCACACAAAAGCGGCCGGTATGTGGGGGCCATGCATGCGGGCT
GGCGCGGCAACCGCTGTGATTTCCCCCTCACCGGCCTTGTGCGTTTTTGCGAGCGCTATAATCTCAAGCCGCAGGATGTT
TTTGCCGTGCGCGGGCCGAGTCTTGGCCCAGGCATGGCGGAATTTGTCAATTTTGACAGGGAGTGGGGCGCGGAATTCCG
CCCGTGGTTTGACGAAGGCAGCCACACTATGGACCTCTGGAGCCTGACCCGGCATCAGCTCATGCTGGCTGGCCTGCCCG
CGCGTAACATTTTTGGCCTGGATATCTGCACGGCCAGCAATAACGAACAGTTTTTCTCCTATCGCCGCGCGAAAGCCTCG
GGGCGTCAGGCCAGCATTATCTGGATTCAGAACGGGTAG

Upstream 100 bases:

>100_bases
CGCGTGTGGGGCTGTGTTTTGACTTTCAGCTTGTTTCTGCCCTTCCTCTGGATCCGTGGGACCAGAGGGTTCACCATGTA
TGCACTGAAGAGCGTTTGCT

Downstream 100 bases:

>100_bases
GGCGGGGCAGGTCTCGCGCAGCCAGTCTTGAAAGGGCCTCTGGCCTACGCCTGATGTTCCTCTGCACAGCGAGCTGGCAA
GGTATTTTTGCCGCCCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSISYIPFMFPGLNSVRCVFQTRPGGACLGEYGGGNISFSVGDDAAHVAANRRDLLASLKAQGLSQWAELSQVHGHVMVF
EPQPVACDAAPAEEGDGMATARPGMGLFIKTADCQPILLAHKSGRYVGAMHAGWRGNRCDFPLTGLVRFCERYNLKPQDV
FAVRGPSLGPGMAEFVNFDREWGAEFRPWFDEGSHTMDLWSLTRHQLMLAGLPARNIFGLDICTASNNEQFFSYRRAKAS
GRQASIIWIQNG

Sequences:

>Translated_252_residues
MSISYIPFMFPGLNSVRCVFQTRPGGACLGEYGGGNISFSVGDDAAHVAANRRDLLASLKAQGLSQWAELSQVHGHVMVF
EPQPVACDAAPAEEGDGMATARPGMGLFIKTADCQPILLAHKSGRYVGAMHAGWRGNRCDFPLTGLVRFCERYNLKPQDV
FAVRGPSLGPGMAEFVNFDREWGAEFRPWFDEGSHTMDLWSLTRHQLMLAGLPARNIFGLDICTASNNEQFFSYRRAKAS
GRQASIIWIQNG
>Mature_251_residues
SISYIPFMFPGLNSVRCVFQTRPGGACLGEYGGGNISFSVGDDAAHVAANRRDLLASLKAQGLSQWAELSQVHGHVMVFE
PQPVACDAAPAEEGDGMATARPGMGLFIKTADCQPILLAHKSGRYVGAMHAGWRGNRCDFPLTGLVRFCERYNLKPQDVF
AVRGPSLGPGMAEFVNFDREWGAEFRPWFDEGSHTMDLWSLTRHQLMLAGLPARNIFGLDICTASNNEQFFSYRRAKASG
RQASIIWIQNG

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=258, Percent_Identity=34.1085271317829, Blast_Score=117, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27634; Mature: 27503

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISYIPFMFPGLNSVRCVFQTRPGGACLGEYGGGNISFSVGDDAAHVAANRRDLLASLK
CCCCCCCEECCCCCCEEEEEEECCCCCEEECCCCCEEEEEECCCHHHHHCCHHHHHHHHH
AQGLSQWAELSQVHGHVMVFEPQPVACDAAPAEEGDGMATARPGMGLFIKTADCQPILLA
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEEE
HKSGRYVGAMHAGWRGNRCDFPLTGLVRFCERYNLKPQDVFAVRGPSLGPGMAEFVNFDR
ECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHCCCH
EWGAEFRPWFDEGSHTMDLWSLTRHQLMLAGLPARNIFGLDICTASNNEQFFSYRRAKAS
HHCCCCCCCCCCCCCEEHHHHHHHHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCC
GRQASIIWIQNG
CCEEEEEEEECC
>Mature Secondary Structure 
SISYIPFMFPGLNSVRCVFQTRPGGACLGEYGGGNISFSVGDDAAHVAANRRDLLASLK
CCCCCCEECCCCCCEEEEEEECCCCCEEECCCCCEEEEEECCCHHHHHCCHHHHHHHHH
AQGLSQWAELSQVHGHVMVFEPQPVACDAAPAEEGDGMATARPGMGLFIKTADCQPILLA
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEEE
HKSGRYVGAMHAGWRGNRCDFPLTGLVRFCERYNLKPQDVFAVRGPSLGPGMAEFVNFDR
ECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHCCCH
EWGAEFRPWFDEGSHTMDLWSLTRHQLMLAGLPARNIFGLDICTASNNEQFFSYRRAKAS
HHCCCCCCCCCCCCCEEHHHHHHHHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCC
GRQASIIWIQNG
CCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]