| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904033
Identifier: 220904033
GI number: 220904033
Start: 893055
End: 893618
Strand: Reverse
Name: 220904033
Synonym: Ddes_0759
Alternate gene names: NA
Gene position: 893618-893055 (Counterclockwise)
Preceding gene: 220904034
Following gene: 220904030
Centisome position: 31.1
GC content: 57.45
Gene sequence:
>564_bases ATGAGCAATCAGCTGGATTACGAAATCAATAAAGAATTGGGCGAGTGCTACCTGTTCATGGGTGACTTTGACAAGGCCGA GGAATACTACCGCAAGGCTGCCAACAGCAGCACGCAGAGCGATGCCCCCTATCTGGGCCTGGCTACTGTGGCCGTGCAGC GGGCTGAACTGGACAAGGCCCTGGTGCTTTACCAGAAAGCCGCCTCGGTAGAAGAAACCGACAAAGCCCTGTGCGGCATC GGCCTGATCCATATGGAACAGGGTCAGCATCAGGAAGCTTTTGACAATTTTGCCCGCGCCCTCAACAAGAACGCGGAAAA TATCGTGGCGCTGAACTGCCTTGTGCGCGAAGCCTATCAGCTGGGTTGCGTCGAGAGCGTGCTGCCCTACCTGGAAGACA CCCTGAATACCGGTGTGGAAGCCGAGGCCGTGCGCGTAACCCTGGCCGGTTGCCTTATCTATCTCGGCCGTGGAGAAGAG GCCCGCGTCCACCTTGAAGCTGTGCTCGGCGCCAACCCGGCGAACAACAGCGCTAAAGAACTTTTCGACACCATGGCTGC CTAG
Upstream 100 bases:
>100_bases ATTGCATAATTATATTTTGGCATGAGCAGTGCATAACACTGGGCAAGCCAATGGCGCATACAGCGCCTTGCACAAACCAG CCTCAGTTGGGGAGGAAAAT
Downstream 100 bases:
>100_bases CCATGGCCCCCGGGCCAGGCCGCTGCCAGAACATACTCCCCTCCCCACATGATTTTCCGGCCCCTGGCAGGTGCCGGGGG CCGGAAAATCTTTTCGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain Protein; Tetratricopeptide Domain-Containing Protein; O-Linked GlcNAc Transferase; TPR Domain-Containing Protein
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKALVLYQKAASVEETDKALCGI GLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQLGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEE ARVHLEAVLGANPANNSAKELFDTMAA
Sequences:
>Translated_187_residues MSNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKALVLYQKAASVEETDKALCGI GLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQLGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEE ARVHLEAVLGANPANNSAKELFDTMAA >Mature_186_residues SNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKALVLYQKAASVEETDKALCGIG LIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQLGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEEA RVHLEAVLGANPANNSAKELFDTMAA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20475; Mature: 20344
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKA CCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LVLYQKAASVEETDKALCGIGLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQ HHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEEARVHLEAVLGANPANNSAKE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEHEECCCCCCCHHHH LFDTMAA HHHHHCC >Mature Secondary Structure SNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKA CCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LVLYQKAASVEETDKALCGIGLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQ HHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEEARVHLEAVLGANPANNSAKE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEHEECCCCCCCHHHH LFDTMAA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA