Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904033

Identifier: 220904033

GI number: 220904033

Start: 893055

End: 893618

Strand: Reverse

Name: 220904033

Synonym: Ddes_0759

Alternate gene names: NA

Gene position: 893618-893055 (Counterclockwise)

Preceding gene: 220904034

Following gene: 220904030

Centisome position: 31.1

GC content: 57.45

Gene sequence:

>564_bases
ATGAGCAATCAGCTGGATTACGAAATCAATAAAGAATTGGGCGAGTGCTACCTGTTCATGGGTGACTTTGACAAGGCCGA
GGAATACTACCGCAAGGCTGCCAACAGCAGCACGCAGAGCGATGCCCCCTATCTGGGCCTGGCTACTGTGGCCGTGCAGC
GGGCTGAACTGGACAAGGCCCTGGTGCTTTACCAGAAAGCCGCCTCGGTAGAAGAAACCGACAAAGCCCTGTGCGGCATC
GGCCTGATCCATATGGAACAGGGTCAGCATCAGGAAGCTTTTGACAATTTTGCCCGCGCCCTCAACAAGAACGCGGAAAA
TATCGTGGCGCTGAACTGCCTTGTGCGCGAAGCCTATCAGCTGGGTTGCGTCGAGAGCGTGCTGCCCTACCTGGAAGACA
CCCTGAATACCGGTGTGGAAGCCGAGGCCGTGCGCGTAACCCTGGCCGGTTGCCTTATCTATCTCGGCCGTGGAGAAGAG
GCCCGCGTCCACCTTGAAGCTGTGCTCGGCGCCAACCCGGCGAACAACAGCGCTAAAGAACTTTTCGACACCATGGCTGC
CTAG

Upstream 100 bases:

>100_bases
ATTGCATAATTATATTTTGGCATGAGCAGTGCATAACACTGGGCAAGCCAATGGCGCATACAGCGCCTTGCACAAACCAG
CCTCAGTTGGGGAGGAAAAT

Downstream 100 bases:

>100_bases
CCATGGCCCCCGGGCCAGGCCGCTGCCAGAACATACTCCCCTCCCCACATGATTTTCCGGCCCCTGGCAGGTGCCGGGGG
CCGGAAAATCTTTTCGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide Domain-Containing Protein; O-Linked GlcNAc Transferase; TPR Domain-Containing Protein

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKALVLYQKAASVEETDKALCGI
GLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQLGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEE
ARVHLEAVLGANPANNSAKELFDTMAA

Sequences:

>Translated_187_residues
MSNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKALVLYQKAASVEETDKALCGI
GLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQLGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEE
ARVHLEAVLGANPANNSAKELFDTMAA
>Mature_186_residues
SNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKALVLYQKAASVEETDKALCGIG
LIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQLGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEEA
RVHLEAVLGANPANNSAKELFDTMAA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20475; Mature: 20344

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKA
CCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LVLYQKAASVEETDKALCGIGLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQ
HHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEEARVHLEAVLGANPANNSAKE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEHEECCCCCCCHHHH
LFDTMAA
HHHHHCC
>Mature Secondary Structure 
SNQLDYEINKELGECYLFMGDFDKAEEYYRKAANSSTQSDAPYLGLATVAVQRAELDKA
CCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LVLYQKAASVEETDKALCGIGLIHMEQGQHQEAFDNFARALNKNAENIVALNCLVREAYQ
HHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGCVESVLPYLEDTLNTGVEAEAVRVTLAGCLIYLGRGEEARVHLEAVLGANPANNSAKE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEHEECCCCCCCHHHH
LFDTMAA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA