| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904029
Identifier: 220904029
GI number: 220904029
Start: 890195
End: 890743
Strand: Direct
Name: 220904029
Synonym: Ddes_0755
Alternate gene names: NA
Gene position: 890195-890743 (Clockwise)
Preceding gene: 220904028
Following gene: 220904031
Centisome position: 30.98
GC content: 53.92
Gene sequence:
>549_bases ATGGCGACCCGGCGTTACGCTTTCAGTTGGGATTTTGTCGGCAATGTCCGTGAGGGCCGGCCCAATCTCGGTAACAGCGC CCGTATTGAAGTATACCGGCTGTTCCAGTATACCATGCGCGATGTTGTCGAGCTTCGGTATGGCACCGAGGCGTCAGAAG AAATCATGCGTGAATGCGGCGAACTGGCAGGCCGCAAATTCTGTGAGAGATTCATTGGCCCCTGCGAAAATTTTGATGAT TTTGTGGCTACGGTACAACAGGTACTGCTGGACTTCGGCATCGGCATCCTGCGTGTAGAAACGGCAAATTATGAAACCTC CCACTTTACGCTGACTGTGGCAGAAGACTTGGATTGCTCCGGCTTAACTGATATGGAGCATACGGTCTGCCACTACGACG AGGGATTTCTTGCGGGAGTGCTGTTTTCGCATGCCGGAGTGGAATTTAACGTGCGCGAGATTGATTGCTGGTGCACCGGC GACCGCACCTGCCGGTTTGAAGCCCGGCCCAGGCAAAAACCGCAGCACACTGAAAAGACACCAGACTGA
Upstream 100 bases:
>100_bases TGGCATAATGCCGGGGGGCCGAAGACTTTTTTGTTTGCAGGGGTAAGGTCAATGCTGCTATCATGTACTCTGGCACTGAC TCTGTAAAAGGCGGTTTTTC
Downstream 100 bases:
>100_bases GCCGGCCCTGCTTTACCTGCCGGCAGGCAGTGCAGCTGAAGCCGCTCCTGATGTTCTGCACAAGTTTTTTTGCCCTGCGG CCGCAAAGTGTTTGTTGTGC
Product: 4-vinyl reductase 4VR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MATRRYAFSWDFVGNVREGRPNLGNSARIEVYRLFQYTMRDVVELRYGTEASEEIMRECGELAGRKFCERFIGPCENFDD FVATVQQVLLDFGIGILRVETANYETSHFTLTVAEDLDCSGLTDMEHTVCHYDEGFLAGVLFSHAGVEFNVREIDCWCTG DRTCRFEARPRQKPQHTEKTPD
Sequences:
>Translated_182_residues MATRRYAFSWDFVGNVREGRPNLGNSARIEVYRLFQYTMRDVVELRYGTEASEEIMRECGELAGRKFCERFIGPCENFDD FVATVQQVLLDFGIGILRVETANYETSHFTLTVAEDLDCSGLTDMEHTVCHYDEGFLAGVLFSHAGVEFNVREIDCWCTG DRTCRFEARPRQKPQHTEKTPD >Mature_181_residues ATRRYAFSWDFVGNVREGRPNLGNSARIEVYRLFQYTMRDVVELRYGTEASEEIMRECGELAGRKFCERFIGPCENFDDF VATVQQVLLDFGIGILRVETANYETSHFTLTVAEDLDCSGLTDMEHTVCHYDEGFLAGVLFSHAGVEFNVREIDCWCTGD RTCRFEARPRQKPQHTEKTPD
Specific function: Unknown
COG id: COG1719
COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20947; Mature: 20815
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRRYAFSWDFVGNVREGRPNLGNSARIEVYRLFQYTMRDVVELRYGTEASEEIMRECG CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELAGRKFCERFIGPCENFDDFVATVQQVLLDFGIGILRVETANYETSHFTLTVAEDLDCS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCC GLTDMEHTVCHYDEGFLAGVLFSHAGVEFNVREIDCWCTGDRTCRFEARPRQKPQHTEKT CCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCC PD CC >Mature Secondary Structure ATRRYAFSWDFVGNVREGRPNLGNSARIEVYRLFQYTMRDVVELRYGTEASEEIMRECG CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELAGRKFCERFIGPCENFDDFVATVQQVLLDFGIGILRVETANYETSHFTLTVAEDLDCS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCC GLTDMEHTVCHYDEGFLAGVLFSHAGVEFNVREIDCWCTGDRTCRFEARPRQKPQHTEKT CCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCC PD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA