| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904023
Identifier: 220904023
GI number: 220904023
Start: 883198
End: 883743
Strand: Reverse
Name: 220904023
Synonym: Ddes_0749
Alternate gene names: NA
Gene position: 883743-883198 (Counterclockwise)
Preceding gene: 220904030
Following gene: 220904021
Centisome position: 30.76
GC content: 52.75
Gene sequence:
>546_bases ATGCGCATGCACGACAAAATCCCCAGAAAAACAGACGTGGAGCTGCGTATTCACCAGGCCGTCCTTAACGACCTGACTGA TCCGGCCATCCAGCGGCTGCATAACAATCATATCTGCTTTACCCTGCTTTCTCTGGTGAACCGCTTTTATGCGCTCGAGC GGCAATGCCGTACCTTCGGCACTGATGTCACTATCCATCTGAGCGAAATCCAGATGATCATGACCATCCACAATACCGAA GGAATACATGTGGGCGGACTGGCGCAAAAACTGGGCATCACCAAGGGCAGCGTGTCTGAAATGTTACGCAAACTTGAACG CAAGGGACTTGTGCGCAAGGAAAAAGACCCGCTCAAGATGACCAGGCTCAACGTCTACCTTACAGACAAAGGCAAGACAG CGCACGAAAACCACATGTATTATCACAGCCGCCTTGACGGCGTTGTGGCAGAGGCCACCGCCGGACACGACGCCGCCACT GTGGAAAATTTTGCGCATTTTCTGGACGATATTCTGGCCCGCCTCACGGCCTTCAGCAAAAACTGA
Upstream 100 bases:
>100_bases GGCCGCAGGCACAGGCATACTAAGCCAGCACGCGCCGGGCCGCAAGAGCGGACAATGGCGCGGGCCTTGTCTTGACAGCA ATGTATGGCTGCCATACATA
Downstream 100 bases:
>100_bases CCGCCCCCTGCCCTCAGGCCCATTGCTTACGGCTCCACCGTAAAGCCCGCCGCCTCCAGCGCAGCCCGGCTTACCGCCCC GGACCGGATAATGCGCAGCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein MarR
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRMHDKIPRKTDVELRIHQAVLNDLTDPAIQRLHNNHICFTLLSLVNRFYALERQCRTFGTDVTIHLSEIQMIMTIHNTE GIHVGGLAQKLGITKGSVSEMLRKLERKGLVRKEKDPLKMTRLNVYLTDKGKTAHENHMYYHSRLDGVVAEATAGHDAAT VENFAHFLDDILARLTAFSKN
Sequences:
>Translated_181_residues MRMHDKIPRKTDVELRIHQAVLNDLTDPAIQRLHNNHICFTLLSLVNRFYALERQCRTFGTDVTIHLSEIQMIMTIHNTE GIHVGGLAQKLGITKGSVSEMLRKLERKGLVRKEKDPLKMTRLNVYLTDKGKTAHENHMYYHSRLDGVVAEATAGHDAAT VENFAHFLDDILARLTAFSKN >Mature_181_residues MRMHDKIPRKTDVELRIHQAVLNDLTDPAIQRLHNNHICFTLLSLVNRFYALERQCRTFGTDVTIHLSEIQMIMTIHNTE GIHVGGLAQKLGITKGSVSEMLRKLERKGLVRKEKDPLKMTRLNVYLTDKGKTAHENHMYYHSRLDGVVAEATAGHDAAT VENFAHFLDDILARLTAFSKN
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20654; Mature: 20654
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMHDKIPRKTDVELRIHQAVLNDLTDPAIQRLHNNHICFTLLSLVNRFYALERQCRTFG CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC TDVTIHLSEIQMIMTIHNTEGIHVGGLAQKLGITKGSVSEMLRKLERKGLVRKEKDPLKM CCEEEEHHHEEEEEEEECCCCEEECCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEE TRLNVYLTDKGKTAHENHMYYHSRLDGVVAEATAGHDAATVENFAHFLDDILARLTAFSK EEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC N C >Mature Secondary Structure MRMHDKIPRKTDVELRIHQAVLNDLTDPAIQRLHNNHICFTLLSLVNRFYALERQCRTFG CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC TDVTIHLSEIQMIMTIHNTEGIHVGGLAQKLGITKGSVSEMLRKLERKGLVRKEKDPLKM CCEEEEHHHEEEEEEEECCCCEEECCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEE TRLNVYLTDKGKTAHENHMYYHSRLDGVVAEATAGHDAATVENFAHFLDDILARLTAFSK EEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA