| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903997
Identifier: 220903997
GI number: 220903997
Start: 850024
End: 850707
Strand: Reverse
Name: 220903997
Synonym: Ddes_0723
Alternate gene names: NA
Gene position: 850707-850024 (Counterclockwise)
Preceding gene: 220903998
Following gene: 220903996
Centisome position: 29.61
GC content: 61.4
Gene sequence:
>684_bases ATGTCAAATTTTTTTCAGAAAGCTCACGAATTTACCGCCCGCTGGGAAGGAGGCCTTACCGACTATCCCTCTGACCCCGG TGGTCTGACCAATCACGGCGTTTCCCTGCGCTGGGTGCAGGACCTGGCCCGTCAGGCCCGTGAAGACTGCCAGCGGCAAG CCCGCAGCTGTGACGGCTGCAATGCGATGCGAACCAGCAAATGCGGCTATTACAGCCTGGATATGGATATGGATGGCGAT GTGGACGCCGATGACATCCGCGCCTGCACCAAGGCCCAGGCTGCGGCCCTGTTTAAAAAACACTTCTGGAACAAGCTCGC CTGCAATGGCTTGCCCCTGCCCCTGGCTGTGACGCTTTATGACGGTGCGGTGAATATGGGTCCCGCGCGGGCCGTGCGCC AGATGCAGCGGGCCATGAACACCGTGGGAGAATCCGAACTGGACCGCTACGCACCCATTGCCGAAGACGGCATCATGGGG CCCCGCACCGCGCAACTGGCCGAGGCGCTGGAGCAGAGCGGGCAGCAGTGGTACGCGGCACGCCAGATACTGCGCCTGCG CGACGCCTTTTACCGTGACCTGGCGGCCAGACGTCCTTCCATGCAGGTTTTTCTGAATGGCTGGCGCAACCGGGTCAAGG CGCTTGGTCAGTACCTGGGCGAGCTTGAAAGGGAGGAAAACTGA
Upstream 100 bases:
>100_bases CGGTTCAGTCTTACCGCAACCGCCCTTTTTGACATGGTGTACCCACGCCGCCGTTGTGGCGGCCAAGTCCACAAACCCAC AACACATGCGGGAGCACACC
Downstream 100 bases:
>100_bases TGTGGAGCCTGATCGGCAAGCTGCTTGGTGGCGTTGGCGGCATGGTTGGCCGGATCATACCTGACCGTAACAGGCAGAAT GAAGCCCAGAGCCGTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSNFFQKAHEFTARWEGGLTDYPSDPGGLTNHGVSLRWVQDLARQAREDCQRQARSCDGCNAMRTSKCGYYSLDMDMDGD VDADDIRACTKAQAAALFKKHFWNKLACNGLPLPLAVTLYDGAVNMGPARAVRQMQRAMNTVGESELDRYAPIAEDGIMG PRTAQLAEALEQSGQQWYAARQILRLRDAFYRDLAARRPSMQVFLNGWRNRVKALGQYLGELEREEN
Sequences:
>Translated_227_residues MSNFFQKAHEFTARWEGGLTDYPSDPGGLTNHGVSLRWVQDLARQAREDCQRQARSCDGCNAMRTSKCGYYSLDMDMDGD VDADDIRACTKAQAAALFKKHFWNKLACNGLPLPLAVTLYDGAVNMGPARAVRQMQRAMNTVGESELDRYAPIAEDGIMG PRTAQLAEALEQSGQQWYAARQILRLRDAFYRDLAARRPSMQVFLNGWRNRVKALGQYLGELEREEN >Mature_226_residues SNFFQKAHEFTARWEGGLTDYPSDPGGLTNHGVSLRWVQDLARQAREDCQRQARSCDGCNAMRTSKCGYYSLDMDMDGDV DADDIRACTKAQAAALFKKHFWNKLACNGLPLPLAVTLYDGAVNMGPARAVRQMQRAMNTVGESELDRYAPIAEDGIMGP RTAQLAEALEQSGQQWYAARQILRLRDAFYRDLAARRPSMQVFLNGWRNRVKALGQYLGELEREEN
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25577; Mature: 25446
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFFQKAHEFTARWEGGLTDYPSDPGGLTNHGVSLRWVQDLARQAREDCQRQARSCDGC CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC NAMRTSKCGYYSLDMDMDGDVDADDIRACTKAQAAALFKKHFWNKLACNGLPLPLAVTLY CCHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE DGAVNMGPARAVRQMQRAMNTVGESELDRYAPIAEDGIMGPRTAQLAEALEQSGQQWYAA CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCHHHHHH RQILRLRDAFYRDLAARRPSMQVFLNGWRNRVKALGQYLGELEREEN HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNFFQKAHEFTARWEGGLTDYPSDPGGLTNHGVSLRWVQDLARQAREDCQRQARSCDGC CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC NAMRTSKCGYYSLDMDMDGDVDADDIRACTKAQAAALFKKHFWNKLACNGLPLPLAVTLY CCHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE DGAVNMGPARAVRQMQRAMNTVGESELDRYAPIAEDGIMGPRTAQLAEALEQSGQQWYAA CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCHHHHHH RQILRLRDAFYRDLAARRPSMQVFLNGWRNRVKALGQYLGELEREEN HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA