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The map label for this gene is bepC [H]

Identifier: 220903909

GI number: 220903909

Start: 763837

End: 765240

Strand: Direct

Name: bepC [H]

Synonym: Ddes_0634

Alternate gene names: 220903909

Gene position: 763837-765240 (Clockwise)

Preceding gene: 220903908

Following gene: 220903910

Centisome position: 26.58

GC content: 60.54

Gene sequence:

>1404_bases
GTGAGACAGTATGTTTTTACCTTCTTGGGGCTGATTCTGCTGGCCCCGGCGCTGACTGTAGCTGCCGAAAGCGCATATCC
GCCTCCTCCGCCCGCAGGGCAGGCCATAACCGTGGAAGATTCCATTTATGGCGTGCTGCGTACCAACAGGGCCTTGAGGG
GGATTCAGGAAAACCGCAATGTGCTTGAGCACGAAGTTGACCGCGCCAAAGCCGGGTTCGGCCCCCGCGTGGACGTTACG
GGGCGCGCTGGCGGCAGTGTGTTGAGCGATTCGAGCACACGCAATAAAGACCTGGACTATCAGATGTGGGGCCTGGCCGG
CGTTAACGCCCAGCTTGTGCAGCCTATCTGGGACGGTTTTGCCACGCGTTCGCGTGTGCGCACGGCCAAGTCTACCCTTG
AGTCCGTAAAGTATCGCGTGTTTGATACGGCCACTTCGCTGTCCCTTGAAGGTATCATTTCGCATATCGACGTTCTGCGC
CGCAGAAAGATCCTTGAACTGGCCGAAATGAACGTAAGCCAGCACAAGGCGCTTGTGAACCAGGCACAGGACAGGGCCAG
CCTTGGCGCTGATACCGCCGCCGACGTGACGCAGGCCCGTTCGCGCCTGCAGCGCGCCCTGTCGAGCCTGTCCGAGGCCA
AGGCCGCCCTTCTTGTGGCGGAAGACAGGTATGTTCGCCTTACTGGGCTGCCCGCCGCGGCCAAAATGGCCCCTGTGACG
ATGCCCCCCGAGCTGTATAAAGGCCCGGATGCGGTACTGACACAGGCCGAGCAGAGCAACCCCAAGCTGTCTGCCTACAT
GCAGGACATCCGCGCCGCGCGCGGCGAGCGTGAGCTGGCCGACTCCGCCTTTTATCCCACGCTGAACCTTGAAGCCGGCC
CCAACTATACGGACAGGGGCGGAGCTACCGACCGCTGGATATACAGCTTTGACGTGCTTGGCGTCGTGCGCTGGAATATC
TTCAATAGCGGAGCGGACCTGGCCGAACGGCGTGCGGCTTCAGCGCGCATCCGGCAGAGCCGCCAGGTGATGTACGATTT
TCTTGATGAGCTGAAGCTGGATATCGAAAGCACCTGGACCAACTATCAGGCCGCGCAGGAACAGTACTCGCACTACAGCA
AGGCTGTGGAGTACAGCAAGTACACCCGCTCGGCGTATGTTGAACAGTTCCAGATCGGCAGGCGCAGCATTCTTGACGTG
CTCGACACGGAGAATGAGCTTTTCAACTCCTCCACCCAGGCCGAAACCGCTCGCGGCAATATCCTGGTGGGCGCGTATCG
CCTGAGCGCGCTTTCGGGCAACCTGCTGCCGCAAATGTCCATTAATACCGGTCCCCTTGGGCAGGAACCGCCCAAGGACG
CCACTGACCCCCGCGAAGAATTCGCTCCCGGCTGGTTTGAGTAA

Upstream 100 bases:

>100_bases
ACCCGGTTGCCGTATCCACAATGTGGGCCATTCTGGCCGGCATGCGGACAGAGCGAAAGGCCGCCATAAGGCGCGGCTTT
TCATTCTTAGGGAGTGAACT

Downstream 100 bases:

>100_bases
GAGGTGTTTGTTCCCCGGCGCGCATGCGCGCCGGGGAACATCGCCTGATTTCTTTATTTATTTCCCCGCGTTCACCACCT
TTCGCGTTTGCATCTGATTG

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MRQYVFTFLGLILLAPALTVAAESAYPPPPPAGQAITVEDSIYGVLRTNRALRGIQENRNVLEHEVDRAKAGFGPRVDVT
GRAGGSVLSDSSTRNKDLDYQMWGLAGVNAQLVQPIWDGFATRSRVRTAKSTLESVKYRVFDTATSLSLEGIISHIDVLR
RRKILELAEMNVSQHKALVNQAQDRASLGADTAADVTQARSRLQRALSSLSEAKAALLVAEDRYVRLTGLPAAAKMAPVT
MPPELYKGPDAVLTQAEQSNPKLSAYMQDIRAARGERELADSAFYPTLNLEAGPNYTDRGGATDRWIYSFDVLGVVRWNI
FNSGADLAERRAASARIRQSRQVMYDFLDELKLDIESTWTNYQAAQEQYSHYSKAVEYSKYTRSAYVEQFQIGRRSILDV
LDTENELFNSSTQAETARGNILVGAYRLSALSGNLLPQMSINTGPLGQEPPKDATDPREEFAPGWFE

Sequences:

>Translated_467_residues
MRQYVFTFLGLILLAPALTVAAESAYPPPPPAGQAITVEDSIYGVLRTNRALRGIQENRNVLEHEVDRAKAGFGPRVDVT
GRAGGSVLSDSSTRNKDLDYQMWGLAGVNAQLVQPIWDGFATRSRVRTAKSTLESVKYRVFDTATSLSLEGIISHIDVLR
RRKILELAEMNVSQHKALVNQAQDRASLGADTAADVTQARSRLQRALSSLSEAKAALLVAEDRYVRLTGLPAAAKMAPVT
MPPELYKGPDAVLTQAEQSNPKLSAYMQDIRAARGERELADSAFYPTLNLEAGPNYTDRGGATDRWIYSFDVLGVVRWNI
FNSGADLAERRAASARIRQSRQVMYDFLDELKLDIESTWTNYQAAQEQYSHYSKAVEYSKYTRSAYVEQFQIGRRSILDV
LDTENELFNSSTQAETARGNILVGAYRLSALSGNLLPQMSINTGPLGQEPPKDATDPREEFAPGWFE
>Mature_467_residues
MRQYVFTFLGLILLAPALTVAAESAYPPPPPAGQAITVEDSIYGVLRTNRALRGIQENRNVLEHEVDRAKAGFGPRVDVT
GRAGGSVLSDSSTRNKDLDYQMWGLAGVNAQLVQPIWDGFATRSRVRTAKSTLESVKYRVFDTATSLSLEGIISHIDVLR
RRKILELAEMNVSQHKALVNQAQDRASLGADTAADVTQARSRLQRALSSLSEAKAALLVAEDRYVRLTGLPAAAKMAPVT
MPPELYKGPDAVLTQAEQSNPKLSAYMQDIRAARGERELADSAFYPTLNLEAGPNYTDRGGATDRWIYSFDVLGVVRWNI
FNSGADLAERRAASARIRQSRQVMYDFLDELKLDIESTWTNYQAAQEQYSHYSKAVEYSKYTRSAYVEQFQIGRRSILDV
LDTENELFNSSTQAETARGNILVGAYRLSALSGNLLPQMSINTGPLGQEPPKDATDPREEFAPGWFE

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51651; Mature: 51651

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQYVFTFLGLILLAPALTVAAESAYPPPPPAGQAITVEDSIYGVLRTNRALRGIQENRN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
VLEHEVDRAKAGFGPRVDVTGRAGGSVLSDSSTRNKDLDYQMWGLAGVNAQLVQPIWDGF
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
ATRSRVRTAKSTLESVKYRVFDTATSLSLEGIISHIDVLRRRKILELAEMNVSQHKALVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QAQDRASLGADTAADVTQARSRLQRALSSLSEAKAALLVAEDRYVRLTGLPAAAKMAPVT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHCCCCC
MPPELYKGPDAVLTQAEQSNPKLSAYMQDIRAARGERELADSAFYPTLNLEAGPNYTDRG
CCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCCCCCC
GATDRWIYSFDVLGVVRWNIFNSGADLAERRAASARIRQSRQVMYDFLDELKLDIESTWT
CCCCCEEEEEHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYQAAQEQYSHYSKAVEYSKYTRSAYVEQFQIGRRSILDVLDTENELFNSSTQAETARGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCC
ILVGAYRLSALSGNLLPQMSINTGPLGQEPPKDATDPREEFAPGWFE
EEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MRQYVFTFLGLILLAPALTVAAESAYPPPPPAGQAITVEDSIYGVLRTNRALRGIQENRN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
VLEHEVDRAKAGFGPRVDVTGRAGGSVLSDSSTRNKDLDYQMWGLAGVNAQLVQPIWDGF
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
ATRSRVRTAKSTLESVKYRVFDTATSLSLEGIISHIDVLRRRKILELAEMNVSQHKALVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QAQDRASLGADTAADVTQARSRLQRALSSLSEAKAALLVAEDRYVRLTGLPAAAKMAPVT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHCCCCC
MPPELYKGPDAVLTQAEQSNPKLSAYMQDIRAARGERELADSAFYPTLNLEAGPNYTDRG
CCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCCCCCC
GATDRWIYSFDVLGVVRWNIFNSGADLAERRAASARIRQSRQVMYDFLDELKLDIESTWT
CCCCCEEEEEHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYQAAQEQYSHYSKAVEYSKYTRSAYVEQFQIGRRSILDVLDTENELFNSSTQAETARGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCC
ILVGAYRLSALSGNLLPQMSINTGPLGQEPPKDATDPREEFAPGWFE
EEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]