| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903816
Identifier: 220903816
GI number: 220903816
Start: 649140
End: 650906
Strand: Direct
Name: 220903816
Synonym: Ddes_0539
Alternate gene names: NA
Gene position: 649140-650906 (Clockwise)
Preceding gene: 220903815
Following gene: 220903817
Centisome position: 22.59
GC content: 64.46
Gene sequence:
>1767_bases ATGGCAGAAAAAATACACAAAACACCGTCAGCCGTGAATGGAAAAAAAGATTTTTCCGTAGTGTCAGGCCATGAAAGCGC GGGCGGCAGCAGTGAAAGACGGGGCCGTGAACCCCTCTCGCCCCCCATGCCCCGGCGGGTCTGCCTGCCGGACTTTTCCG GCCGTACACTGACTCTGCCCGATGGGCCGGAGTCCTGGCAGTGTCGGGGAGAAGGGCCTGATGCCCTTGTTCTGGGGCTG GGGCCGGGCAGCCCCTGGCTCACGGGCCTTGTGGGAAAGGCGCGGCGGGTCTGCTGGCTTGAGCATGAGCCGACGTTGCG GGCCTTGCCGCCGCTGGAGTCACGGGGCGGTACAGGCATGCCGGAACACTGGCAGCGCGTGTCGCCGGAAGAAGCGGCGG CGCTGGCTGTACGCAGTACCTGCTATTTTTATGGCCCGGCCATGCGTCTGGCTCCGGAGTTCTGGGGACCGCTCATGGGA CGTGTGGACGCCGCGCTGCTGCATGCCCCCTGTCCAGATATGGCTGCGGAGCCGGCCGTGATGGAGACTTCCGGCGTGAG GCGCGGGGATGGGATACGCAAGGGCGGGCCGGTGCTTCTGCCGGGGCATAGCGGTCTGTTGCTGCATCAGGAACTGCACC AGGCCCTGGAGGAATGCGGCCTCGGGCCTGTGCTGCCGATGCCGGAAAAAGCACATGGCCCAGTGGAACGAGCGTCTCTG CACCATATTTTCCGGCAGGGACGACCCCGTTTTCTTCTGTCTGTCAATCTGCGCGGGCTGGATGCGGAGGGGCGCGTCTT CCATCTGTGCCGGGCCATGGGCGTGCCTGTGGTCTTGTGGCTGGTGGACAATCCCTGGCATGTGCTTTCCGCCCTGCGCC TGCCCTGGTGGCGCGAGGCTTTCATTTTTGTAACAGACGCCTCGTTTGTTCCGGAGCTTGCCGGGGCCGGGGCGCGGCAG GTATTTCATCTTCCGCTGGCCGTGCCTCGGCATATGTGGCGGAGCACAAGGCCGGGGCATGCCCGGGGCGGGGCGGAAAT GGAGCCGCTTTTTGTGGGCCGTTCGGCCTTTCCGCACAAAGGGCGTTTTTTTGCGGCAGCCCGTGTACCCGACGCACTTG GAGAAGAAGCGCTTCGGGTGCTGGAGCGCAGCAGAGGACCAATGGACGCGCCCAATTATTTCTGGTGGCAGGAGCGGCTT GGAGCCGCTGTCTGGCCGGGGATGGCGTCCCGCGATGCCGGGCTTGGAGCTGAAATATGCGCACAGGCCAACCGCGCGCG CTGGCTGCGTGCGGTTGTGGATCAGGCGGCGGCCCAAAAAAATGACGCTTGCGTTCGTCCCGCCTTGCGGATTGTGGGCG ATGCAGGCTGGCACGAACTTTTGCCCGGCGCGCAAATTCTGCCTCCTGTAGACTATTATATGGTACTGCCCGATCTTTAT GCTTCGGCGGCGGTACTCAATGTCACGAGCCTGCTGCTGCCCCGGAGCCTGAGCCAGAGGCATTTTGACGTCTGGGCCGC CGGGGGCGTGCTTTTCAGTGATGCCACGCCGGGGCTGGATATTTTTCCCACCAGCCTCACAGAGCCGATCCGCCTGCGCG GGCCGGAAGATTTCTGGCCGCGCTGGGACGAAGCTTGCTCACGGCCCGCACAGATGGCAGAGCTGCGGCGGGCCTGGCGT GAACACCTGCGGAGCGCGCACGACTATGAACACAGGGTGCGGCGCATCTGCGAAATTGCCGGAATCGGCTGCCCCGCAAG CGGGTAG
Upstream 100 bases:
>100_bases CTCTCCTGGCATACAAGCCCCGTCGCGATCCAGGCGGCGGGGCTTTTCCATGCTGTCCTCATTGGCTATGCTGTGAAAAA GCACGATACAGCGAGGGGCC
Downstream 100 bases:
>100_bases AGAAAACAGTGCAAAACCGGTTTATTCCGGCATCTGACATTTTTTTACGAAATGGGCATTCGCCGGATAGCTTGGTTGTT GCCATGCTGGTTTGCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MAEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLPDGPESWQCRGEGPDALVLGL GPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGMPEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMG RVDAALLHAPCPDMAAEPAVMETSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREAFIFVTDASFVPELAGAGARQ VFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHKGRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERL GAAVWPGMASRDAGLGAEICAQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWPRWDEACSRPAQMAELRRAWR EHLRSAHDYEHRVRRICEIAGIGCPASG
Sequences:
>Translated_588_residues MAEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLPDGPESWQCRGEGPDALVLGL GPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGMPEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMG RVDAALLHAPCPDMAAEPAVMETSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREAFIFVTDASFVPELAGAGARQ VFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHKGRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERL GAAVWPGMASRDAGLGAEICAQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWPRWDEACSRPAQMAELRRAWR EHLRSAHDYEHRVRRICEIAGIGCPASG >Mature_587_residues AEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLPDGPESWQCRGEGPDALVLGLG PGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGMPEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMGR VDAALLHAPCPDMAAEPAVMETSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASLH HIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREAFIFVTDASFVPELAGAGARQV FHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHKGRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERLG AAVWPGMASRDAGLGAEICAQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLYA SAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWPRWDEACSRPAQMAELRRAWRE HLRSAHDYEHRVRRICEIAGIGCPASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64617; Mature: 64486
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLP CCCCHHCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCCEEECC DGPESWQCRGEGPDALVLGLGPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGM CCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC PEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMGRVDAALLHAPCPDMAAEPAV CHHHHHCCHHHHHHHHHHHHHHEECCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE METSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL ECCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREA HHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCE FIFVTDASFVPELAGAGARQVFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHK EEEEECCHHHHHHHCCCCHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCC GRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERLGAAVWPGMASRDAGLGAEIC CCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCHHHH AQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWP HHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCEECCCCCCCCEEECCCHHCCC RWDEACSRPAQMAELRRAWREHLRSAHDYEHRVRRICEIAGIGCPASG CHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLP CCCHHCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCCEEECC DGPESWQCRGEGPDALVLGLGPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGM CCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC PEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMGRVDAALLHAPCPDMAAEPAV CHHHHHCCHHHHHHHHHHHHHHEECCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE METSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL ECCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREA HHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCE FIFVTDASFVPELAGAGARQVFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHK EEEEECCHHHHHHHCCCCHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCC GRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERLGAAVWPGMASRDAGLGAEIC CCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCHHHH AQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWP HHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCEECCCCCCCCEEECCCHHCCC RWDEACSRPAQMAELRRAWREHLRSAHDYEHRVRRICEIAGIGCPASG CHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA