Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903816

Identifier: 220903816

GI number: 220903816

Start: 649140

End: 650906

Strand: Direct

Name: 220903816

Synonym: Ddes_0539

Alternate gene names: NA

Gene position: 649140-650906 (Clockwise)

Preceding gene: 220903815

Following gene: 220903817

Centisome position: 22.59

GC content: 64.46

Gene sequence:

>1767_bases
ATGGCAGAAAAAATACACAAAACACCGTCAGCCGTGAATGGAAAAAAAGATTTTTCCGTAGTGTCAGGCCATGAAAGCGC
GGGCGGCAGCAGTGAAAGACGGGGCCGTGAACCCCTCTCGCCCCCCATGCCCCGGCGGGTCTGCCTGCCGGACTTTTCCG
GCCGTACACTGACTCTGCCCGATGGGCCGGAGTCCTGGCAGTGTCGGGGAGAAGGGCCTGATGCCCTTGTTCTGGGGCTG
GGGCCGGGCAGCCCCTGGCTCACGGGCCTTGTGGGAAAGGCGCGGCGGGTCTGCTGGCTTGAGCATGAGCCGACGTTGCG
GGCCTTGCCGCCGCTGGAGTCACGGGGCGGTACAGGCATGCCGGAACACTGGCAGCGCGTGTCGCCGGAAGAAGCGGCGG
CGCTGGCTGTACGCAGTACCTGCTATTTTTATGGCCCGGCCATGCGTCTGGCTCCGGAGTTCTGGGGACCGCTCATGGGA
CGTGTGGACGCCGCGCTGCTGCATGCCCCCTGTCCAGATATGGCTGCGGAGCCGGCCGTGATGGAGACTTCCGGCGTGAG
GCGCGGGGATGGGATACGCAAGGGCGGGCCGGTGCTTCTGCCGGGGCATAGCGGTCTGTTGCTGCATCAGGAACTGCACC
AGGCCCTGGAGGAATGCGGCCTCGGGCCTGTGCTGCCGATGCCGGAAAAAGCACATGGCCCAGTGGAACGAGCGTCTCTG
CACCATATTTTCCGGCAGGGACGACCCCGTTTTCTTCTGTCTGTCAATCTGCGCGGGCTGGATGCGGAGGGGCGCGTCTT
CCATCTGTGCCGGGCCATGGGCGTGCCTGTGGTCTTGTGGCTGGTGGACAATCCCTGGCATGTGCTTTCCGCCCTGCGCC
TGCCCTGGTGGCGCGAGGCTTTCATTTTTGTAACAGACGCCTCGTTTGTTCCGGAGCTTGCCGGGGCCGGGGCGCGGCAG
GTATTTCATCTTCCGCTGGCCGTGCCTCGGCATATGTGGCGGAGCACAAGGCCGGGGCATGCCCGGGGCGGGGCGGAAAT
GGAGCCGCTTTTTGTGGGCCGTTCGGCCTTTCCGCACAAAGGGCGTTTTTTTGCGGCAGCCCGTGTACCCGACGCACTTG
GAGAAGAAGCGCTTCGGGTGCTGGAGCGCAGCAGAGGACCAATGGACGCGCCCAATTATTTCTGGTGGCAGGAGCGGCTT
GGAGCCGCTGTCTGGCCGGGGATGGCGTCCCGCGATGCCGGGCTTGGAGCTGAAATATGCGCACAGGCCAACCGCGCGCG
CTGGCTGCGTGCGGTTGTGGATCAGGCGGCGGCCCAAAAAAATGACGCTTGCGTTCGTCCCGCCTTGCGGATTGTGGGCG
ATGCAGGCTGGCACGAACTTTTGCCCGGCGCGCAAATTCTGCCTCCTGTAGACTATTATATGGTACTGCCCGATCTTTAT
GCTTCGGCGGCGGTACTCAATGTCACGAGCCTGCTGCTGCCCCGGAGCCTGAGCCAGAGGCATTTTGACGTCTGGGCCGC
CGGGGGCGTGCTTTTCAGTGATGCCACGCCGGGGCTGGATATTTTTCCCACCAGCCTCACAGAGCCGATCCGCCTGCGCG
GGCCGGAAGATTTCTGGCCGCGCTGGGACGAAGCTTGCTCACGGCCCGCACAGATGGCAGAGCTGCGGCGGGCCTGGCGT
GAACACCTGCGGAGCGCGCACGACTATGAACACAGGGTGCGGCGCATCTGCGAAATTGCCGGAATCGGCTGCCCCGCAAG
CGGGTAG

Upstream 100 bases:

>100_bases
CTCTCCTGGCATACAAGCCCCGTCGCGATCCAGGCGGCGGGGCTTTTCCATGCTGTCCTCATTGGCTATGCTGTGAAAAA
GCACGATACAGCGAGGGGCC

Downstream 100 bases:

>100_bases
AGAAAACAGTGCAAAACCGGTTTATTCCGGCATCTGACATTTTTTTACGAAATGGGCATTCGCCGGATAGCTTGGTTGTT
GCCATGCTGGTTTGCGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MAEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLPDGPESWQCRGEGPDALVLGL
GPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGMPEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMG
RVDAALLHAPCPDMAAEPAVMETSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL
HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREAFIFVTDASFVPELAGAGARQ
VFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHKGRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERL
GAAVWPGMASRDAGLGAEICAQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY
ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWPRWDEACSRPAQMAELRRAWR
EHLRSAHDYEHRVRRICEIAGIGCPASG

Sequences:

>Translated_588_residues
MAEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLPDGPESWQCRGEGPDALVLGL
GPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGMPEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMG
RVDAALLHAPCPDMAAEPAVMETSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL
HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREAFIFVTDASFVPELAGAGARQ
VFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHKGRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERL
GAAVWPGMASRDAGLGAEICAQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY
ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWPRWDEACSRPAQMAELRRAWR
EHLRSAHDYEHRVRRICEIAGIGCPASG
>Mature_587_residues
AEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLPDGPESWQCRGEGPDALVLGLG
PGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGMPEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMGR
VDAALLHAPCPDMAAEPAVMETSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASLH
HIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREAFIFVTDASFVPELAGAGARQV
FHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHKGRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERLG
AAVWPGMASRDAGLGAEICAQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLYA
SAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWPRWDEACSRPAQMAELRRAWRE
HLRSAHDYEHRVRRICEIAGIGCPASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64617; Mature: 64486

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLP
CCCCHHCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCCEEECC
DGPESWQCRGEGPDALVLGLGPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGM
CCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC
PEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMGRVDAALLHAPCPDMAAEPAV
CHHHHHCCHHHHHHHHHHHHHHEECCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
METSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL
ECCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREA
HHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCE
FIFVTDASFVPELAGAGARQVFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHK
EEEEECCHHHHHHHCCCCHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCC
GRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERLGAAVWPGMASRDAGLGAEIC
CCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCHHHH
AQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH
ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWP
HHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCEECCCCCCCCEEECCCHHCCC
RWDEACSRPAQMAELRRAWREHLRSAHDYEHRVRRICEIAGIGCPASG
CHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AEKIHKTPSAVNGKKDFSVVSGHESAGGSSERRGREPLSPPMPRRVCLPDFSGRTLTLP
CCCHHCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCCEEECC
DGPESWQCRGEGPDALVLGLGPGSPWLTGLVGKARRVCWLEHEPTLRALPPLESRGGTGM
CCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC
PEHWQRVSPEEAAALAVRSTCYFYGPAMRLAPEFWGPLMGRVDAALLHAPCPDMAAEPAV
CHHHHHCCHHHHHHHHHHHHHHEECCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
METSGVRRGDGIRKGGPVLLPGHSGLLLHQELHQALEECGLGPVLPMPEKAHGPVERASL
ECCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
HHIFRQGRPRFLLSVNLRGLDAEGRVFHLCRAMGVPVVLWLVDNPWHVLSALRLPWWREA
HHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCE
FIFVTDASFVPELAGAGARQVFHLPLAVPRHMWRSTRPGHARGGAEMEPLFVGRSAFPHK
EEEEECCHHHHHHHCCCCHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCC
GRFFAAARVPDALGEEALRVLERSRGPMDAPNYFWWQERLGAAVWPGMASRDAGLGAEIC
CCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCHHHH
AQANRARWLRAVVDQAAAQKNDACVRPALRIVGDAGWHELLPGAQILPPVDYYMVLPDLY
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH
ASAAVLNVTSLLLPRSLSQRHFDVWAAGGVLFSDATPGLDIFPTSLTEPIRLRGPEDFWP
HHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCEECCCCCCCCEEECCCHHCCC
RWDEACSRPAQMAELRRAWREHLRSAHDYEHRVRRICEIAGIGCPASG
CHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA