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The map label for this gene is vacJ [C]

Identifier: 220903809

GI number: 220903809

Start: 643249

End: 644097

Strand: Reverse

Name: vacJ [C]

Synonym: Ddes_0532

Alternate gene names: 220903809

Gene position: 644097-643249 (Counterclockwise)

Preceding gene: 220903810

Following gene: 220903807

Centisome position: 22.42

GC content: 58.89

Gene sequence:

>849_bases
ATGGCAAATAATCATTGCTTGCGCCGGTTGCGCCTGCTGGCGCTGAACCTTCTGCTGCTGACGGGCCTTGCCTGTATTGC
TTCAGATGAAGCCCTGGCAGCCCGGGGGGTGCGGCAAGAGCCTACGCCCTCGACCGTCTACGGGGCTTCCCCCATGCTGC
CCGCCGGGGCCATCACGGTTACACCCTACGGCTCACTGCGCGCGACGGACGATCTTGACGACTATGACACCGCCGATGCC
AGCATAGCCGACCCCTTTGAGCCGTGGAACCGCTTCTGGTTTCATTTCAATGACATCTTCTACCTTTATGTTGCCAGACC
GGCCTACGATGCATGGGTGTTCATCACGCCCCACCAGCTGCGCGGCGGGCTGAAAAACTTCTTTTCCAACCTGCTGTTTC
CCGTGCGCTTTGTGAACAATATTCTTCAGTTCCGCTTTATGGAAGCCGGGGTGGAGTTCAGCCGCTTTATCATGAACACC
ACCTCCAGCGCAGGCTTTGCCGATGTAGCCAAGGGCAAGCGCACCATTGTGCCGGTTGATCCCACGGGCGAGGACTTCGG
GCAGACCCTGGGCCGCTGGGGCATAGGCCAGGGTTTTTACCTGGTATGGCCCATACTTGGCCCAAGCTCGGCGCGTGATA
CCATTGGCCGCGTGGGCGACGTTTTTACAGACCCCCTCTTCTACCTCAAGCCCTGGGAACTGGGCACGGGACTGGCCACA
GGATTTCGTTTTAACGACCTTGGCGATGTGCTGCCCCTGTATGAAGACCTGAACAGCGCCGCCGTGGACCCCTATATTGC
CATGCGCGAAGCCTATGCAAACTTCCGCAAGTCGCAGATCATGCACTAG

Upstream 100 bases:

>100_bases
AAAAACTACCGCACCCAGTTTCAGGACATCCTGAATACCGACTCACCGGAGAACCTCATTGCACGCATCAAGGCCAAGGC
AATGGAAGTGCGGCAGGAAC

Downstream 100 bases:

>100_bases
GTGAGCGCTTGCAAGGTATTGTGAGGGCGGGACCCTTTTGCAAAAAAGCCCCTCCCCCACACCCCCTGAAACCTTTATTC
CCGTTGCAGTCTGTGGCAGG

Product: VacJ family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MANNHCLRRLRLLALNLLLLTGLACIASDEALAARGVRQEPTPSTVYGASPMLPAGAITVTPYGSLRATDDLDDYDTADA
SIADPFEPWNRFWFHFNDIFYLYVARPAYDAWVFITPHQLRGGLKNFFSNLLFPVRFVNNILQFRFMEAGVEFSRFIMNT
TSSAGFADVAKGKRTIVPVDPTGEDFGQTLGRWGIGQGFYLVWPILGPSSARDTIGRVGDVFTDPLFYLKPWELGTGLAT
GFRFNDLGDVLPLYEDLNSAAVDPYIAMREAYANFRKSQIMH

Sequences:

>Translated_282_residues
MANNHCLRRLRLLALNLLLLTGLACIASDEALAARGVRQEPTPSTVYGASPMLPAGAITVTPYGSLRATDDLDDYDTADA
SIADPFEPWNRFWFHFNDIFYLYVARPAYDAWVFITPHQLRGGLKNFFSNLLFPVRFVNNILQFRFMEAGVEFSRFIMNT
TSSAGFADVAKGKRTIVPVDPTGEDFGQTLGRWGIGQGFYLVWPILGPSSARDTIGRVGDVFTDPLFYLKPWELGTGLAT
GFRFNDLGDVLPLYEDLNSAAVDPYIAMREAYANFRKSQIMH
>Mature_281_residues
ANNHCLRRLRLLALNLLLLTGLACIASDEALAARGVRQEPTPSTVYGASPMLPAGAITVTPYGSLRATDDLDDYDTADAS
IADPFEPWNRFWFHFNDIFYLYVARPAYDAWVFITPHQLRGGLKNFFSNLLFPVRFVNNILQFRFMEAGVEFSRFIMNTT
SSAGFADVAKGKRTIVPVDPTGEDFGQTLGRWGIGQGFYLVWPILGPSSARDTIGRVGDVFTDPLFYLKPWELGTGLATG
FRFNDLGDVLPLYEDLNSAAVDPYIAMREAYANFRKSQIMH

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=199, Percent_Identity=34.6733668341709, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 31501; Mature: 31370

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNHCLRRLRLLALNLLLLTGLACIASDEALAARGVRQEPTPSTVYGASPMLPAGAITV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
TPYGSLRATDDLDDYDTADASIADPFEPWNRFWFHFNDIFYLYVARPAYDAWVFITPHQL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCEEEEEEECCCCCEEEEEEHHHH
RGGLKNFFSNLLFPVRFVNNILQFRFMEAGVEFSRFIMNTTSSAGFADVAKGKRTIVPVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCEEEEECC
PTGEDFGQTLGRWGIGQGFYLVWPILGPSSARDTIGRVGDVFTDPLFYLKPWELGTGLAT
CCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHC
GFRFNDLGDVLPLYEDLNSAAVDPYIAMREAYANFRKSQIMH
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANNHCLRRLRLLALNLLLLTGLACIASDEALAARGVRQEPTPSTVYGASPMLPAGAITV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
TPYGSLRATDDLDDYDTADASIADPFEPWNRFWFHFNDIFYLYVARPAYDAWVFITPHQL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCEEEEEEECCCCCEEEEEEHHHH
RGGLKNFFSNLLFPVRFVNNILQFRFMEAGVEFSRFIMNTTSSAGFADVAKGKRTIVPVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCEEEEECC
PTGEDFGQTLGRWGIGQGFYLVWPILGPSSARDTIGRVGDVFTDPLFYLKPWELGTGLAT
CCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHC
GFRFNDLGDVLPLYEDLNSAAVDPYIAMREAYANFRKSQIMH
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA