| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903802
Identifier: 220903802
GI number: 220903802
Start: 633642
End: 634958
Strand: Reverse
Name: 220903802
Synonym: Ddes_0525
Alternate gene names: NA
Gene position: 634958-633642 (Counterclockwise)
Preceding gene: 220903803
Following gene: 220903801
Centisome position: 22.1
GC content: 65.76
Gene sequence:
>1317_bases ATGAGCGGAGCTTCCCGTCTTATTCCATTGCCAAGTTTTCTGGCTCTTGCCCTGGCTGCGGCGCACTTCTGGCGGGCTGG CTGGGCTTCCCTGGCCACGGCCTGTGTGCTTGCCGCCCTGCTGGCCTGGACGCGCCTTGCGTGGGTGCGGCAGTTTCTGC TTCTGGGGCTGCCCCTTCTGGCTGCCCGCTGGATATGGACCACAGGCCAGTTTGTGCAGATACGGCAATTGATGGAACAA CCCTGGCAGCGCCTGGCAGCCATCCTCCTGTCTGTGGCACTGCTTACGGTTCTGGCGGCCCTGCTTCTTCTGGGGCAAAA GGCGCAGCAGCGTTATTGCCGCCGCGAAGACACCGCTGCCGCGCAACTGGGAGCCATGAGCGTATGCCTGGCTCTTCTGC TGCCTGCCTGGTTTATGAATCCGCAACTCTTGCTGCTGGAACGCTTTATTCCCCAAGGGGGGCTGGTGCAGATCACGCTG GCCGCCCTGTGGGCCACACTGGCGGCGGGCTGGCTTGGCGACCGGAGCATGGCGTCACAGGCCCGCATGCGGCTCTGGCG GCTGTTTTCTCTGGTGTTTTTCGGGCAGCTTGTGCTCGGACTGGCAGTGGAAAGCCGTTTTCTGCTCACGGGCAGTCTTC ACTTGCCCGTTCCCGGCCTGATCGCGGCCGGGCCTGTCTACCGGGGCGGAGGCTGGTTCATGCTGGGCCTTTTCGGCCTG TCCACCCTGCTGGCGGGCGCGGCATGGTGCAGCCAGCTCTGCTATTTCGGCATATGGGACGCCACAGCGGCGGCAAACAC GAAATCCCGCCCCGCCCCGCGCTGGCTGCCGCGTCTGCGCCTGGGCATGCTTGCCCTCACCCTGTTGACGGCACTGGGCC TGCGCCTTGCGGGAACGTCTGCGGCCGCGCCTCTGGCCTGCGGCCTGCTGCTGGGGCTTCTGCTTGTCCCCTGCGCCCTG CTGTTCAGCCGCGCCCGGGGATACGCCGCCTATTGCCGGGGCATATGTCCTCTGGGGCTTCTGGCGCAATGGCTGGGCCG CGCCGCCCCCTGGCGCGTGCGCCGTGTGGGCGACTGCTGTGGCTGCATGGCCTGCGTGCGGGCGTGCAGGCAGGACGCCA TGAACGAAGCGGCTCTTGAAAAAGGCATTGCCGCCAACACCTGCCATTTGTGCCGCGACTGTATCCATGTCTGCCCCAAG GGCGCTCTGGCGCTGACATGGCTTGGCAAAACCGGCAGCCGGAACTGGGCCGGAACTGTTTTTCTTGCACTGCTGGCCGG GCTGCACGCGGCCTTTCTGTTCATGGCCCGCATCTGA
Upstream 100 bases:
>100_bases AAGACGGGCAGGCCGCCAACAGCGATATGCGCTGCCCGTAGCCGCCCCTGGCCGGGAATGTAAACGTTTTTTAACACGCT GATTTTAAAGGAAGTCTGAC
Downstream 100 bases:
>100_bases CATGGCAGAGGCAGCCCCGCAGGGCAATTTTACCATCGCCCGGGGGATGCACAGGCAACTGTGCGCGGCGAATAACAAGC TGAAACGATCTGTACGACAG
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSGASRLIPLPSFLALALAAAHFWRAGWASLATACVLAALLAWTRLAWVRQFLLLGLPLLAARWIWTTGQFVQIRQLMEQ PWQRLAAILLSVALLTVLAALLLLGQKAQQRYCRREDTAAAQLGAMSVCLALLLPAWFMNPQLLLLERFIPQGGLVQITL AALWATLAAGWLGDRSMASQARMRLWRLFSLVFFGQLVLGLAVESRFLLTGSLHLPVPGLIAAGPVYRGGGWFMLGLFGL STLLAGAAWCSQLCYFGIWDATAAANTKSRPAPRWLPRLRLGMLALTLLTALGLRLAGTSAAAPLACGLLLGLLLVPCAL LFSRARGYAAYCRGICPLGLLAQWLGRAAPWRVRRVGDCCGCMACVRACRQDAMNEAALEKGIAANTCHLCRDCIHVCPK GALALTWLGKTGSRNWAGTVFLALLAGLHAAFLFMARI
Sequences:
>Translated_438_residues MSGASRLIPLPSFLALALAAAHFWRAGWASLATACVLAALLAWTRLAWVRQFLLLGLPLLAARWIWTTGQFVQIRQLMEQ PWQRLAAILLSVALLTVLAALLLLGQKAQQRYCRREDTAAAQLGAMSVCLALLLPAWFMNPQLLLLERFIPQGGLVQITL AALWATLAAGWLGDRSMASQARMRLWRLFSLVFFGQLVLGLAVESRFLLTGSLHLPVPGLIAAGPVYRGGGWFMLGLFGL STLLAGAAWCSQLCYFGIWDATAAANTKSRPAPRWLPRLRLGMLALTLLTALGLRLAGTSAAAPLACGLLLGLLLVPCAL LFSRARGYAAYCRGICPLGLLAQWLGRAAPWRVRRVGDCCGCMACVRACRQDAMNEAALEKGIAANTCHLCRDCIHVCPK GALALTWLGKTGSRNWAGTVFLALLAGLHAAFLFMARI >Mature_437_residues SGASRLIPLPSFLALALAAAHFWRAGWASLATACVLAALLAWTRLAWVRQFLLLGLPLLAARWIWTTGQFVQIRQLMEQP WQRLAAILLSVALLTVLAALLLLGQKAQQRYCRREDTAAAQLGAMSVCLALLLPAWFMNPQLLLLERFIPQGGLVQITLA ALWATLAAGWLGDRSMASQARMRLWRLFSLVFFGQLVLGLAVESRFLLTGSLHLPVPGLIAAGPVYRGGGWFMLGLFGLS TLLAGAAWCSQLCYFGIWDATAAANTKSRPAPRWLPRLRLGMLALTLLTALGLRLAGTSAAAPLACGLLLGLLLVPCALL FSRARGYAAYCRGICPLGLLAQWLGRAAPWRVRRVGDCCGCMACVRACRQDAMNEAALEKGIAANTCHLCRDCIHVCPKG ALALTWLGKTGSRNWAGTVFLALLAGLHAAFLFMARI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47298; Mature: 47167
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: PS00138 SUBTILASE_SER ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGASRLIPLPSFLALALAAAHFWRAGWASLATACVLAALLAWTRLAWVRQFLLLGLPLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARWIWTTGQFVQIRQLMEQPWQRLAAILLSVALLTVLAALLLLGQKAQQRYCRREDTAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AQLGAMSVCLALLLPAWFMNPQLLLLERFIPQGGLVQITLAALWATLAAGWLGDRSMASQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH ARMRLWRLFSLVFFGQLVLGLAVESRFLLTGSLHLPVPGLIAAGPVYRGGGWFMLGLFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCEECCHHHHHHHHHH STLLAGAAWCSQLCYFGIWDATAAANTKSRPAPRWLPRLRLGMLALTLLTALGLRLAGTS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC AAAPLACGLLLGLLLVPCALLFSRARGYAAYCRGICPLGLLAQWLGRAAPWRVRRVGDCC HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH GCMACVRACRQDAMNEAALEKGIAANTCHLCRDCIHVCPKGALALTWLGKTGSRNWAGTV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH FLALLAGLHAAFLFMARI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGASRLIPLPSFLALALAAAHFWRAGWASLATACVLAALLAWTRLAWVRQFLLLGLPLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARWIWTTGQFVQIRQLMEQPWQRLAAILLSVALLTVLAALLLLGQKAQQRYCRREDTAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AQLGAMSVCLALLLPAWFMNPQLLLLERFIPQGGLVQITLAALWATLAAGWLGDRSMASQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH ARMRLWRLFSLVFFGQLVLGLAVESRFLLTGSLHLPVPGLIAAGPVYRGGGWFMLGLFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCEECCHHHHHHHHHH STLLAGAAWCSQLCYFGIWDATAAANTKSRPAPRWLPRLRLGMLALTLLTALGLRLAGTS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC AAAPLACGLLLGLLLVPCALLFSRARGYAAYCRGICPLGLLAQWLGRAAPWRVRRVGDCC HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH GCMACVRACRQDAMNEAALEKGIAANTCHLCRDCIHVCPKGALALTWLGKTGSRNWAGTV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH FLALLAGLHAAFLFMARI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA