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The map label for this gene is ygaZ [C]

Identifier: 220903800

GI number: 220903800

Start: 632092

End: 632838

Strand: Reverse

Name: ygaZ [C]

Synonym: Ddes_0523

Alternate gene names: 220903800

Gene position: 632838-632092 (Counterclockwise)

Preceding gene: 220903801

Following gene: 220903799

Centisome position: 22.02

GC content: 60.78

Gene sequence:

>747_bases
ATGTCGAGCATTTCCCCCGCGTCCCCCCTGGCGGAGGGGCTGCGCCGTGCACTGCCCATTGTTCTCGGGTATACCCCTGT
AGGCTTTGCCTTTGGCGTGCTGGCGGTCAAAAACAACATCCCCCCCTCCCTGGCTGTGGCCATGGCGGTACTCATGTTTT
CCGGTTCGGGCCAGTTTGTCTTTGCAAGCATGTGGGGAGCGGGAGCGGGCGCACTGTCCATCATGGCGGCGGTTTTTATC
GTCAACCTGCGTTACCTGCTCCAGTCGGCCGCAGAATCACCCTGGCTGGCCGGCCTGCCCCGCATGCAGCGTTTCCTGCT
GGGGCTGGGCCTCACGGACGAAACCTTTGCCGTTCATATCACAGCTTTTCAGAACGGCTGGCAGCGCAACCTCACCACGC
TCTTTGTCTGCAACCAGACCACGCAGCTTGCCTGGGTAGGCGGCAGCGCCATCGGCGCTTTTTGCGGCGAACTGGTCAGC
GACGTAAAGCCGCTCGGCCTTGATTACGCGCTTACGGCCATGTTTCTGGCCCTGCTGGTTCCGCAGTGCGTAAGCCGCCT
GCATATTCTGGTGGCCCTTTTCACCATGAGCCTGTCCATTGCCCTCAAAAGCGCGGGCATGAGCCAGTGGAATATTGCTG
TTGCCACTGTGGCGGGCGCAAGCCTGGGTACGGCACTGCTGCTGTACCGGGACAAAAAAAACGCGCGTTCCCGCACACCC
GCGAAGTTTGATGAGGTACACTCATGA

Upstream 100 bases:

>100_bases
GCAAAAAGTATCCCACATTCTGGTGGTGAAGTGCCGACTTGCCACACCGCACCAAAAAGGGTAGCCATTTTCTTTTCCGG
CATCTGGTGAGGTTTGCAAC

Downstream 100 bases:

>100_bases
ACGAACCCGGCTGGCTTGATACCAACACGGGCCTCATCCTGTGCATCCTGGGCAGCACCCTGGTGACCCTGCTGCCCAAA
ATCCTGCCCGTTACCTTTCT

Product: AzlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSSISPASPLAEGLRRALPIVLGYTPVGFAFGVLAVKNNIPPSLAVAMAVLMFSGSGQFVFASMWGAGAGALSIMAAVFI
VNLRYLLQSAAESPWLAGLPRMQRFLLGLGLTDETFAVHITAFQNGWQRNLTTLFVCNQTTQLAWVGGSAIGAFCGELVS
DVKPLGLDYALTAMFLALLVPQCVSRLHILVALFTMSLSIALKSAGMSQWNIAVATVAGASLGTALLLYRDKKNARSRTP
AKFDEVHS

Sequences:

>Translated_248_residues
MSSISPASPLAEGLRRALPIVLGYTPVGFAFGVLAVKNNIPPSLAVAMAVLMFSGSGQFVFASMWGAGAGALSIMAAVFI
VNLRYLLQSAAESPWLAGLPRMQRFLLGLGLTDETFAVHITAFQNGWQRNLTTLFVCNQTTQLAWVGGSAIGAFCGELVS
DVKPLGLDYALTAMFLALLVPQCVSRLHILVALFTMSLSIALKSAGMSQWNIAVATVAGASLGTALLLYRDKKNARSRTP
AKFDEVHS
>Mature_247_residues
SSISPASPLAEGLRRALPIVLGYTPVGFAFGVLAVKNNIPPSLAVAMAVLMFSGSGQFVFASMWGAGAGALSIMAAVFIV
NLRYLLQSAAESPWLAGLPRMQRFLLGLGLTDETFAVHITAFQNGWQRNLTTLFVCNQTTQLAWVGGSAIGAFCGELVSD
VKPLGLDYALTAMFLALLVPQCVSRLHILVALFTMSLSIALKSAGMSQWNIAVATVAGASLGTALLLYRDKKNARSRTPA
KFDEVHS

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=229, Percent_Identity=31.0043668122271, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26267; Mature: 26136

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSISPASPLAEGLRRALPIVLGYTPVGFAFGVLAVKNNIPPSLAVAMAVLMFSGSGQFV
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
FASMWGAGAGALSIMAAVFIVNLRYLLQSAAESPWLAGLPRMQRFLLGLGLTDETFAVHI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEE
TAFQNGWQRNLTTLFVCNQTTQLAWVGGSAIGAFCGELVSDVKPLGLDYALTAMFLALLV
EEHHCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
PQCVSRLHILVALFTMSLSIALKSAGMSQWNIAVATVAGASLGTALLLYRDKKNARSRTP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEECCCCHHHHEEEEEECCCCCCCCCC
AKFDEVHS
CCHHHCCC
>Mature Secondary Structure 
SSISPASPLAEGLRRALPIVLGYTPVGFAFGVLAVKNNIPPSLAVAMAVLMFSGSGQFV
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
FASMWGAGAGALSIMAAVFIVNLRYLLQSAAESPWLAGLPRMQRFLLGLGLTDETFAVHI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEE
TAFQNGWQRNLTTLFVCNQTTQLAWVGGSAIGAFCGELVSDVKPLGLDYALTAMFLALLV
EEHHCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
PQCVSRLHILVALFTMSLSIALKSAGMSQWNIAVATVAGASLGTALLLYRDKKNARSRTP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEECCCCHHHHEEEEEECCCCCCCCCC
AKFDEVHS
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]