| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is pssA [H]
Identifier: 220903781
GI number: 220903781
Start: 610843
End: 611604
Strand: Direct
Name: pssA [H]
Synonym: Ddes_0504
Alternate gene names: 220903781
Gene position: 610843-611604 (Clockwise)
Preceding gene: 220903780
Following gene: 220903782
Centisome position: 21.26
GC content: 57.48
Gene sequence:
>762_bases ATGACCACAGAAGTCAAAAAGCCGCGCAAGGGAGTTTACCTCCTGCCGAACATGATCACGACGTTGAGCATGTTTCTTGG CTTTTTGTCTATGGTCTGGGCCGGGCAGGGGCGCTTTGAAGCTGCCTGCATGGCCATTCTGCTTTCCGCCGTTATGGACG GGCTTGACGGCAAGGTGGCCCGCCTGACCAATACGGCCAGCGAGTTCGGCGTACAGTACGATTCGCTTTCCGACCTTGTG GCCTTTGGCCTTGCCCCCGCCATGCTGCTCTGGCAATGGCAGTTGCAGAGTTTTAACCGCGTGGGCATTGCCGCTGCCTT TATTTATGCCGCATGCGGGGCCTTGCGCCTTGCGCGTTTCAACGTCAGCACCGCTGCTGCGGGCAAGCGTTTTTTTATTG GCCTGCCCATTCCCGCCGGCGGCTGCACCATCGTGACATTTGTGTTTTTTGCCGCTCTTTTTCCCGAAGTGTTGCAGCCT GTTACGCCGTATGTGGCCCTTTTGCTGGCCTTGGGCGTGGGTACACTGATGGTGAGCCGGGTGCGTTATTTTTCTTTTAA GGAATACGACTTCTTGCGCGCGCACCCCGTCCGCACCATGCTTGCCTTTCTGCTCGTTCTTGCCACTGTGATATCGTTTC CGCGCGTCATGGGCTTCATGCTCTGCGCCGTGTACATTGCCGGTGGCCTTGTCTACACCTTCGTTATCCTTCCCCGCCGC GACCGTCAGCTACTACGCGCCCTATCGCCCCAGAGCGATTAA
Upstream 100 bases:
>100_bases TGGGGCAGCAGGTTTTTGCCGGGCAATGTGTTGTTGCCCGTGCAAGGCAAAGCTAGCCTTTTTCGGCGCTTAACGGCCCC GGGCCATAACTTGGTGAAGT
Downstream 100 bases:
>100_bases GGTTGCGTAACGGCTCGCCGCCCCTATGGGCGGAATGCCTCCCTCCCTGGACCAGCCGCCCTGTCGGTGGCCGTTATGCA AGAGATATTACTTGTCATAC
Product: CDP-diacylglycerol/serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTTEVKKPRKGVYLLPNMITTLSMFLGFLSMVWAGQGRFEAACMAILLSAVMDGLDGKVARLTNTASEFGVQYDSLSDLV AFGLAPAMLLWQWQLQSFNRVGIAAAFIYAACGALRLARFNVSTAAAGKRFFIGLPIPAGGCTIVTFVFFAALFPEVLQP VTPYVALLLALGVGTLMVSRVRYFSFKEYDFLRAHPVRTMLAFLLVLATVISFPRVMGFMLCAVYIAGGLVYTFVILPRR DRQLLRALSPQSD
Sequences:
>Translated_253_residues MTTEVKKPRKGVYLLPNMITTLSMFLGFLSMVWAGQGRFEAACMAILLSAVMDGLDGKVARLTNTASEFGVQYDSLSDLV AFGLAPAMLLWQWQLQSFNRVGIAAAFIYAACGALRLARFNVSTAAAGKRFFIGLPIPAGGCTIVTFVFFAALFPEVLQP VTPYVALLLALGVGTLMVSRVRYFSFKEYDFLRAHPVRTMLAFLLVLATVISFPRVMGFMLCAVYIAGGLVYTFVILPRR DRQLLRALSPQSD >Mature_252_residues TTEVKKPRKGVYLLPNMITTLSMFLGFLSMVWAGQGRFEAACMAILLSAVMDGLDGKVARLTNTASEFGVQYDSLSDLVA FGLAPAMLLWQWQLQSFNRVGIAAAFIYAACGALRLARFNVSTAAAGKRFFIGLPIPAGGCTIVTFVFFAALFPEVLQPV TPYVALLLALGVGTLMVSRVRYFSFKEYDFLRAHPVRTMLAFLLVLATVISFPRVMGFMLCAVYIAGGLVYTFVILPRRD RQLLRALSPQSD
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=139, Percent_Identity=40.2877697841727, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 27752; Mature: 27620
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEVKKPRKGVYLLPNMITTLSMFLGFLSMVWAGQGRFEAACMAILLSAVMDGLDGKVA CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHH RLTNTASEFGVQYDSLSDLVAFGLAPAMLLWQWQLQSFNRVGIAAAFIYAACGALRLARF HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NVSTAAAGKRFFIGLPIPAGGCTIVTFVFFAALFPEVLQPVTPYVALLLALGVGTLMVSR CCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRYFSFKEYDFLRAHPVRTMLAFLLVLATVISFPRVMGFMLCAVYIAGGLVYTFVILPRR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DRQLLRALSPQSD HHHHHHHHCCCCC >Mature Secondary Structure TTEVKKPRKGVYLLPNMITTLSMFLGFLSMVWAGQGRFEAACMAILLSAVMDGLDGKVA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHH RLTNTASEFGVQYDSLSDLVAFGLAPAMLLWQWQLQSFNRVGIAAAFIYAACGALRLARF HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NVSTAAAGKRFFIGLPIPAGGCTIVTFVFFAALFPEVLQPVTPYVALLLALGVGTLMVSR CCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRYFSFKEYDFLRAHPVRTMLAFLLVLATVISFPRVMGFMLCAVYIAGGLVYTFVILPRR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DRQLLRALSPQSD HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]