| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903638
Identifier: 220903638
GI number: 220903638
Start: 437016
End: 437792
Strand: Reverse
Name: 220903638
Synonym: Ddes_0358
Alternate gene names: NA
Gene position: 437792-437016 (Counterclockwise)
Preceding gene: 220903640
Following gene: 220903637
Centisome position: 15.24
GC content: 60.62
Gene sequence:
>777_bases ATGAGCAATGACGCCAGCCGCGAATTTCTCGACACCCTGCCGGAACTGGGACCCGCTGAAACCTTCTGTTTTGACTGCCA CCCCGGCGTTCCCTGTTTCAACCGCTGCTGTGCGGAGCTGACCCTCCCCCTCACGCCATACGATATCCTGCGGCTACGCC GGCATATGGGCATGACCAGCGAGGATTTTCTTGCGACCTTTACCACCATGCGCTCCTTTCCCGACACGGGTTTTCCCCTG CCCATGCTGCGCATGCAGGATGGCCCCGGCGAACCCTGCCCCTTTGTAAGCCCCGCAGGCTGCTCCGTATATGAAGACAG ACCCGGAGCCTGCCGCTATTATCCCATCGGGCGCGGCACGAAGATGGCCGCAGACGGCGTTGCCGAACGCTTTTTCGTGG TGCGCGAGGCCCACTGCCACGGCTTTGACGAGGGCGTCAGCCGCACTCCCCATCAATGGATGGAAAACGAAGAACTGCAG CCCTTCAACAGGGCCAATGATCGTTACATGCGCCTCATGGCCCTGGTGCGGGCTACAGGCAAGCCGCTGGAGCCGCGCAT GGCCACCATGACGGTGCTCTGCCTCTTCCAGCTTGACCGTTTTCGCGAGCTTGTGACGGCCATGAAAATATTCAGCCATG TGGACACGAGCGAAGAGCGCAAGGCCGCAGTCATGCAGGACAGCCCCGAAGGCGACGTGGCGGCGCTGGACTTCGCGCTG GACTGGCTGGAACTTGTGATTTTCGGGCAAAGTGAAGGACTTGCCAAAAAGCAATAG
Upstream 100 bases:
>100_bases GCAACCGCTTCAAATCACGGCGCGCAATGCGCGCCCGTTCTCCCCTGCCTCCCCCGCAAGCCGCCGGGCCAGCAATGCCC GCAACTCATAAGGAGCCTTC
Downstream 100 bases:
>100_bases TGTGTTTTTTCACAATAACACGACAAAACACCTGAAATCACACGAAACCAAGCAGAACGATGCGTATTTTTGTTCTTTAG TGACAAGAGCTTGGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSNDASREFLDTLPELGPAETFCFDCHPGVPCFNRCCAELTLPLTPYDILRLRRHMGMTSEDFLATFTTMRSFPDTGFPL PMLRMQDGPGEPCPFVSPAGCSVYEDRPGACRYYPIGRGTKMAADGVAERFFVVREAHCHGFDEGVSRTPHQWMENEELQ PFNRANDRYMRLMALVRATGKPLEPRMATMTVLCLFQLDRFRELVTAMKIFSHVDTSEERKAAVMQDSPEGDVAALDFAL DWLELVIFGQSEGLAKKQ
Sequences:
>Translated_258_residues MSNDASREFLDTLPELGPAETFCFDCHPGVPCFNRCCAELTLPLTPYDILRLRRHMGMTSEDFLATFTTMRSFPDTGFPL PMLRMQDGPGEPCPFVSPAGCSVYEDRPGACRYYPIGRGTKMAADGVAERFFVVREAHCHGFDEGVSRTPHQWMENEELQ PFNRANDRYMRLMALVRATGKPLEPRMATMTVLCLFQLDRFRELVTAMKIFSHVDTSEERKAAVMQDSPEGDVAALDFAL DWLELVIFGQSEGLAKKQ >Mature_257_residues SNDASREFLDTLPELGPAETFCFDCHPGVPCFNRCCAELTLPLTPYDILRLRRHMGMTSEDFLATFTTMRSFPDTGFPLP MLRMQDGPGEPCPFVSPAGCSVYEDRPGACRYYPIGRGTKMAADGVAERFFVVREAHCHGFDEGVSRTPHQWMENEELQP FNRANDRYMRLMALVRATGKPLEPRMATMTVLCLFQLDRFRELVTAMKIFSHVDTSEERKAAVMQDSPEGDVAALDFALD WLELVIFGQSEGLAKKQ
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29139; Mature: 29008
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDASREFLDTLPELGPAETFCFDCHPGVPCFNRCCAELTLPLTPYDILRLRRHMGMTS CCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH EDFLATFTTMRSFPDTGFPLPMLRMQDGPGEPCPFVSPAGCSVYEDRPGACRYYPIGRGT HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC KMAADGVAERFFVVREAHCHGFDEGVSRTPHQWMENEELQPFNRANDRYMRLMALVRATG CHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC KPLEPRMATMTVLCLFQLDRFRELVTAMKIFSHVDTSEERKAAVMQDSPEGDVAALDFAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHH DWLELVIFGQSEGLAKKQ HHHHHHHCCCCCCCCCCC >Mature Secondary Structure SNDASREFLDTLPELGPAETFCFDCHPGVPCFNRCCAELTLPLTPYDILRLRRHMGMTS CCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH EDFLATFTTMRSFPDTGFPLPMLRMQDGPGEPCPFVSPAGCSVYEDRPGACRYYPIGRGT HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC KMAADGVAERFFVVREAHCHGFDEGVSRTPHQWMENEELQPFNRANDRYMRLMALVRATG CHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC KPLEPRMATMTVLCLFQLDRFRELVTAMKIFSHVDTSEERKAAVMQDSPEGDVAALDFAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHH DWLELVIFGQSEGLAKKQ HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA