| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903592
Identifier: 220903592
GI number: 220903592
Start: 382111
End: 383286
Strand: Direct
Name: 220903592
Synonym: Ddes_0311
Alternate gene names: NA
Gene position: 382111-383286 (Clockwise)
Preceding gene: 220903591
Following gene: 220903593
Centisome position: 13.3
GC content: 64.2
Gene sequence:
>1176_bases ATGGCGCTTTCCAATTTTCTCATACGCCCCCCCAGCGAGGCCCAGCAGGGGCAGGCCGCCGGCCAGCGCCGCGCCGCGCC GGTCGCGGGCGGAGCCAGTTTTGCCGCAGTCATGCAGGGGCAGGCGCGTCAGGCTGAAGGGACAGCCCCGCTTCCGCAAG CCGTACAGGCCATGAGCGGCCAGGAATCCCCGGCACAGGTGCAACCTGCGGAACTTGCGGGCATGCAGGCTCCCGCGCGT AATCTCGTGCTTGCGGGGCGCAGCCCCAGCGACCTCATGCGAGCCCAGGTCTTTGGCAAGGCTCAGGCTGATCTGCGCCA GACGCAGGCCATTGAAGGGCTTATGCAAAGTGTTTCCGGCAACGGCTCGACCCTTGATCTGGCCCGCAGCATGGGGGCGG CGCGTCAGTTGCACTCGCTCACCAGCACTGTGGGGGAGCGGCTTGGCGGTCTGAACGGCGGAGACTTCATTCATAGCCGT CCTGCAGCCCCGGGGCAGGGCAAGGCCCGGCAAAAACGGCAGCAGCCGGATGCAGCCGAGATGGAGCTGGGCAAGCTTTC CGCCCAGTTTGAATCCGGCCGCGATGGCATAGCGGCCATAGGCTATGACCGTAATGGCGGAACCTCATACGGCAAGTATC AGGTATCGTCACGCGCGGGCAGCCTTAATGATTTTCTTGCATTTCTGGATGGAGAAGCGCCGGATATCTCCAAGAGGCTG CGTTCGGCAGGGCCGGGCAATACCGGCAGCCGCAAGGGAGCGATGCCCGACATGTGGCGCGCCATTGCCGATGAGCAGCC GGAACGCTTTGAAGCGCTGCAGGAAGCCTATGTGCGCGAAAGCCATTACAAGCCTGCTGTGGAGGGCATAAGCCAGCGGA CCTCTCTGGAGGCGGACAGCCTGTCGCCTGCCATGCGTGAGGTCATCTGGAGCACATCCGTGCAGCATGGCCCCACAGGA GCCACGCGCATTTTTGCCCGCGCAGAAGCCATGAGCGGTGACCCCGGCGACCCGGCCTATGAGCGCAGGCTTATCACCAA TGTATACAAGGTGCGGTCCGGCCAGTTCGGCTCGTCCACCAGCGAGGTGCAGGCCGCTGTGCAAAACCGCTTCCGTCAGG AACGCACCCTGGCCCTCAATCTTCTGGATGGCGGACACAAGGCCAATCTGGCCTGA
Upstream 100 bases:
>100_bases CTGCGGATTCAACTCGCTGCAATGCCTTGGCTTTGGCGTCTTGGCACTGTACTTGCTGTCCCTTCTGTGTGGTATCAGAT CAGCCGCTCAGGAGGAACAC
Downstream 100 bases:
>100_bases CGGCCTGAGCGCTCATGAAGACAGAACCCTTCCACGCCCATATCCAGCAGCCACACGCTCTTGCGGCCGGCGAACATCCG GCAGGCGGGCGTGATGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MALSNFLIRPPSEAQQGQAAGQRRAAPVAGGASFAAVMQGQARQAEGTAPLPQAVQAMSGQESPAQVQPAELAGMQAPAR NLVLAGRSPSDLMRAQVFGKAQADLRQTQAIEGLMQSVSGNGSTLDLARSMGAARQLHSLTSTVGERLGGLNGGDFIHSR PAAPGQGKARQKRQQPDAAEMELGKLSAQFESGRDGIAAIGYDRNGGTSYGKYQVSSRAGSLNDFLAFLDGEAPDISKRL RSAGPGNTGSRKGAMPDMWRAIADEQPERFEALQEAYVRESHYKPAVEGISQRTSLEADSLSPAMREVIWSTSVQHGPTG ATRIFARAEAMSGDPGDPAYERRLITNVYKVRSGQFGSSTSEVQAAVQNRFRQERTLALNLLDGGHKANLA
Sequences:
>Translated_391_residues MALSNFLIRPPSEAQQGQAAGQRRAAPVAGGASFAAVMQGQARQAEGTAPLPQAVQAMSGQESPAQVQPAELAGMQAPAR NLVLAGRSPSDLMRAQVFGKAQADLRQTQAIEGLMQSVSGNGSTLDLARSMGAARQLHSLTSTVGERLGGLNGGDFIHSR PAAPGQGKARQKRQQPDAAEMELGKLSAQFESGRDGIAAIGYDRNGGTSYGKYQVSSRAGSLNDFLAFLDGEAPDISKRL RSAGPGNTGSRKGAMPDMWRAIADEQPERFEALQEAYVRESHYKPAVEGISQRTSLEADSLSPAMREVIWSTSVQHGPTG ATRIFARAEAMSGDPGDPAYERRLITNVYKVRSGQFGSSTSEVQAAVQNRFRQERTLALNLLDGGHKANLA >Mature_390_residues ALSNFLIRPPSEAQQGQAAGQRRAAPVAGGASFAAVMQGQARQAEGTAPLPQAVQAMSGQESPAQVQPAELAGMQAPARN LVLAGRSPSDLMRAQVFGKAQADLRQTQAIEGLMQSVSGNGSTLDLARSMGAARQLHSLTSTVGERLGGLNGGDFIHSRP AAPGQGKARQKRQQPDAAEMELGKLSAQFESGRDGIAAIGYDRNGGTSYGKYQVSSRAGSLNDFLAFLDGEAPDISKRLR SAGPGNTGSRKGAMPDMWRAIADEQPERFEALQEAYVRESHYKPAVEGISQRTSLEADSLSPAMREVIWSTSVQHGPTGA TRIFARAEAMSGDPGDPAYERRLITNVYKVRSGQFGSSTSEVQAAVQNRFRQERTLALNLLDGGHKANLA
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41417; Mature: 41286
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSNFLIRPPSEAQQGQAAGQRRAAPVAGGASFAAVMQGQARQAEGTAPLPQAVQAMSG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCC QESPAQVQPAELAGMQAPARNLVLAGRSPSDLMRAQVFGKAQADLRQTQAIEGLMQSVSG CCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGSTLDLARSMGAARQLHSLTSTVGERLGGLNGGDFIHSRPAAPGQGKARQKRQQPDAAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHH MELGKLSAQFESGRDGIAAIGYDRNGGTSYGKYQVSSRAGSLNDFLAFLDGEAPDISKRL HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHH RSAGPGNTGSRKGAMPDMWRAIADEQPERFEALQEAYVRESHYKPAVEGISQRTSLEADS HHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH LSPAMREVIWSTSVQHGPTGATRIFARAEAMSGDPGDPAYERRLITNVYKVRSGQFGSST CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH SEVQAAVQNRFRQERTLALNLLDGGHKANLA HHHHHHHHHHHHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure ALSNFLIRPPSEAQQGQAAGQRRAAPVAGGASFAAVMQGQARQAEGTAPLPQAVQAMSG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCC QESPAQVQPAELAGMQAPARNLVLAGRSPSDLMRAQVFGKAQADLRQTQAIEGLMQSVSG CCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGSTLDLARSMGAARQLHSLTSTVGERLGGLNGGDFIHSRPAAPGQGKARQKRQQPDAAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHH MELGKLSAQFESGRDGIAAIGYDRNGGTSYGKYQVSSRAGSLNDFLAFLDGEAPDISKRL HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHH RSAGPGNTGSRKGAMPDMWRAIADEQPERFEALQEAYVRESHYKPAVEGISQRTSLEADS HHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH LSPAMREVIWSTSVQHGPTGATRIFARAEAMSGDPGDPAYERRLITNVYKVRSGQFGSST CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH SEVQAAVQNRFRQERTLALNLLDGGHKANLA HHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA