| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is srpH [H]
Identifier: 220903560
GI number: 220903560
Start: 331530
End: 332441
Strand: Direct
Name: srpH [H]
Synonym: Ddes_0279
Alternate gene names: 220903560
Gene position: 331530-332441 (Clockwise)
Preceding gene: 220903557
Following gene: 220903561
Centisome position: 11.54
GC content: 60.09
Gene sequence:
>912_bases ATGAGTGAATTGCGCGACCTCAAGGCCACGGCCATGCCCCTGCTTGACAGCGTGGTCGAGCGGCTCTGCCATCCGTCTTC TCTTGACGCGGTGTGGCATCGTCCGGCAGCGGGCGCGGCCATGCCGTCGCTGAAAGATCTTTCGGAAGTGATGGACAGGC TGCGGGCGGCCATTTTTCCCGGTTATTTCGGCCCCGCACGGGTATGGCGCGAGTCCATGCGTTATCACCTGTCGGCCAAT CTCGACACCATTTACCGCATGCTGTGTGAACAGATCGTGCGGGGCTTCTGCTTTGGCTGCGAGGGTGAGGGCAATCCCTG CACGTCCTGCGAGACAGACGGCGAAAAAGCCGCCATCGCTTTTATGGACAGCCTGCCGGAGATCAGGCGTCTGCTGGCGG GCGACGCCAAGGCCGCCTACGAGGGCGACCCTGCGGCCACAAGCCCTGGCGAGGCCATATTCTGCTATCCTTCCATGCAG GCCATGCTGCATCACCGCATCGCCCACGAGCTGTACAAACTCAACGTGCCGGTGATACCGCGCATCATTTCTGAAATGTC GCATTCGGCCACAGGCATTGACCTGCACCCCGGTGCGAGCATCGGTGAAGAATTTTTTATTGACCACGGCACTGGCGTGG TCATTGGCGAAACCTGCATTATCGGGCGCAACTGCCGTCTTTACCAGGGTGTGACTCTTGGGGCCTTGTCCTTTCCCAAG AATCCGGACGGCACGCTCACCAAGGGCATACCAAGGCACCCCATTCTTTGTGATAATGTCACGGTGTACGCCGGAGCCAC CATTCTTGGTCGCGTGACCATCGGCAAAGGGGCCATTATCGGTGGTAATGTGTGGATTACCCAGGATGTGCCCGAGGGCG GACGCATCCTGCAGGAGCGGCCCCGTGGCTAA
Upstream 100 bases:
>100_bases TTGCCGGTAGTGATTTTGCCCTTTCACCGCGGGCAAAGCGCTGCCTGTATTGCGGCGGCGGGCGTGAACGTGTACAAGAG AAAAAACACAGGATATTGCT
Downstream 100 bases:
>100_bases CCTGTTACGCCTGATCACGAAACGCCGCGGCCTCTGCTGCCTTGTCTTGCTGTGCCTGCTGGCCGGACCGGCCTTGAGCG GCTGCGGGCAGGGCGTGCGT
Product: Serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSELRDLKATAMPLLDSVVERLCHPSSLDAVWHRPAAGAAMPSLKDLSEVMDRLRAAIFPGYFGPARVWRESMRYHLSAN LDTIYRMLCEQIVRGFCFGCEGEGNPCTSCETDGEKAAIAFMDSLPEIRRLLAGDAKAAYEGDPAATSPGEAIFCYPSMQ AMLHHRIAHELYKLNVPVIPRIISEMSHSATGIDLHPGASIGEEFFIDHGTGVVIGETCIIGRNCRLYQGVTLGALSFPK NPDGTLTKGIPRHPILCDNVTVYAGATILGRVTIGKGAIIGGNVWITQDVPEGGRILQERPRG
Sequences:
>Translated_303_residues MSELRDLKATAMPLLDSVVERLCHPSSLDAVWHRPAAGAAMPSLKDLSEVMDRLRAAIFPGYFGPARVWRESMRYHLSAN LDTIYRMLCEQIVRGFCFGCEGEGNPCTSCETDGEKAAIAFMDSLPEIRRLLAGDAKAAYEGDPAATSPGEAIFCYPSMQ AMLHHRIAHELYKLNVPVIPRIISEMSHSATGIDLHPGASIGEEFFIDHGTGVVIGETCIIGRNCRLYQGVTLGALSFPK NPDGTLTKGIPRHPILCDNVTVYAGATILGRVTIGKGAIIGGNVWITQDVPEGGRILQERPRG >Mature_302_residues SELRDLKATAMPLLDSVVERLCHPSSLDAVWHRPAAGAAMPSLKDLSEVMDRLRAAIFPGYFGPARVWRESMRYHLSANL DTIYRMLCEQIVRGFCFGCEGEGNPCTSCETDGEKAAIAFMDSLPEIRRLLAGDAKAAYEGDPAATSPGEAIFCYPSMQA MLHHRIAHELYKLNVPVIPRIISEMSHSATGIDLHPGASIGEEFFIDHGTGVVIGETCIIGRNCRLYQGVTLGALSFPKN PDGTLTKGIPRHPILCDNVTVYAGATILGRVTIGKGAIIGGNVWITQDVPEGGRILQERPRG
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=166, Percent_Identity=32.5301204819277, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 32859; Mature: 32728
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRDLKATAMPLLDSVVERLCHPSSLDAVWHRPAAGAAMPSLKDLSEVMDRLRAAIFP CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC GYFGPARVWRESMRYHLSANLDTIYRMLCEQIVRGFCFGCEGEGNPCTSCETDGEKAAIA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHH FMDSLPEIRRLLAGDAKAAYEGDPAATSPGEAIFCYPSMQAMLHHRIAHELYKLNVPVIP HHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHH RIISEMSHSATGIDLHPGASIGEEFFIDHGTGVVIGETCIIGRNCRLYQGVTLGALSFPK HHHHHHCCCCCCCCCCCCCCCCCHHEEECCCCEEEECEEEECCCCEEECCCEEEEECCCC NPDGTLTKGIPRHPILCDNVTVYAGATILGRVTIGKGAIIGGNVWITQDVPEGGRILQER CCCCCCCCCCCCCCEEECCEEEEECCEEEEEEEECCCEEEECCEEEECCCCCCCHHHHCC PRG CCC >Mature Secondary Structure SELRDLKATAMPLLDSVVERLCHPSSLDAVWHRPAAGAAMPSLKDLSEVMDRLRAAIFP CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC GYFGPARVWRESMRYHLSANLDTIYRMLCEQIVRGFCFGCEGEGNPCTSCETDGEKAAIA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHH FMDSLPEIRRLLAGDAKAAYEGDPAATSPGEAIFCYPSMQAMLHHRIAHELYKLNVPVIP HHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHH RIISEMSHSATGIDLHPGASIGEEFFIDHGTGVVIGETCIIGRNCRLYQGVTLGALSFPK HHHHHHCCCCCCCCCCCCCCCCCHHEEECCCCEEEECEEEECCCCEEECCCEEEEECCCC NPDGTLTKGIPRHPILCDNVTVYAGATILGRVTIGKGAIIGGNVWITQDVPEGGRILQER CCCCCCCCCCCCCCEEECCEEEEECCEEEEEEEECCCEEEECCEEEECCCCCCCHHHHCC PRG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]