| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903522
Identifier: 220903522
GI number: 220903522
Start: 289565
End: 290599
Strand: Direct
Name: 220903522
Synonym: Ddes_0241
Alternate gene names: NA
Gene position: 289565-290599 (Clockwise)
Preceding gene: 220903521
Following gene: 220903523
Centisome position: 10.08
GC content: 58.45
Gene sequence:
>1035_bases ATGAGAAAGAGAACTTCCGAACGCTTCGCCCGTGAGGTGCTGTCGGCGCTGGCTCAGGGCTACAGCGTGCCCAGTGTGGG CGAGCATTTCGCCATTGAGCCCAGTGTGGCGCAGCGCCTTAACGACAAGATTGTGGAGCAGTCCACATTTTTGCCCCGCA TCAACATTGTGCCTGTGGACGAGCTGGTGGGCGAAAACCTGCTCGGTTACGCCAAGGAGCCCGTCACCAGCCGTACCGAC ACCAGCGGCAGCGGCGAACGCAAACCCAAGGACGTGCTGGGCCTCGGCAAATACGACTACCAGCTCCACAAGACGGATTC TGACGTTGCCATCCGCTATAACACCATCGATGTTTGGGCCAAGTTTCCCGATTTGGCCGACCATTATGCCCGCTATGTGC AGGAACGCATTGCCGCCGACCGTGAACTTATCGGCTGGTATGGCGAACGCGCCGTGGCCACAACTGACCTTGTGGCCAAC CCTCTCATGCAGGATGTGAACAAGGGCTGGCTGCAATACATGCGCGACAATCTGCCCGCCAATATCCTCACTGAGGGCGA GCACGCGGGCGAAATCCGCATCGGTAAAGGCGGTGACTACTCCTGCCTTGATGTGGCCATCAACGACATGGTCGAGGGCA TCCCGTATTACCTGCAGAAGGATCTTGTGGCCCTCATCGGGCGCGACCTCATTGTGCGCGAGCGCGCCATGCTTTTTGAA GCAGTGCAGGGCACGCCTACCGAAAAAGCGGCTATGGACTCCTTTTCGCAAAAATACGGCGGCCTGCCCTGGGAAACGCC GTCTTTCTTCCCCGCGCGCGGCCTCGTCATTACGCCCTTGGCCAACCTCTCTCTGTACCATCAGGACACCTCCTGGCGGC GCAAAATTGAAGACAACGCCAAGAAGGACCAGTACGAAGACTACCTTTCCCGCAACGAGGGCTATGTGGTTGAAACGCCC GAGCAGCTCGTGGCCTGGGAATTCGCCAACGTCAAACTGCCCTTTGAAGAGGGCGGCCAAACGGTGTGGAAATAA
Upstream 100 bases:
>100_bases GTCCGTTGCCCGCCCGGGCACCACGGCTCCCAAAACCCTTGGTGCAGCGCGTAAACCCCTTCTGTAGCGCCAGTCAGCGC CACACCGCTTAAGGAACATC
Downstream 100 bases:
>100_bases TGAAATTCGGCATCATGCGGGCGCATCAGGATCGTGTTGGCAATGAGGGGCGCGTTATTGCCCAGTTGCCCAAGGGCAAG GCCCCGGTATCTCCCCAGGG
Product: phage major capsid protein, P2 family
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage Gene; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MRKRTSERFAREVLSALAQGYSVPSVGEHFAIEPSVAQRLNDKIVEQSTFLPRINIVPVDELVGENLLGYAKEPVTSRTD TSGSGERKPKDVLGLGKYDYQLHKTDSDVAIRYNTIDVWAKFPDLADHYARYVQERIAADRELIGWYGERAVATTDLVAN PLMQDVNKGWLQYMRDNLPANILTEGEHAGEIRIGKGGDYSCLDVAINDMVEGIPYYLQKDLVALIGRDLIVRERAMLFE AVQGTPTEKAAMDSFSQKYGGLPWETPSFFPARGLVITPLANLSLYHQDTSWRRKIEDNAKKDQYEDYLSRNEGYVVETP EQLVAWEFANVKLPFEEGGQTVWK
Sequences:
>Translated_344_residues MRKRTSERFAREVLSALAQGYSVPSVGEHFAIEPSVAQRLNDKIVEQSTFLPRINIVPVDELVGENLLGYAKEPVTSRTD TSGSGERKPKDVLGLGKYDYQLHKTDSDVAIRYNTIDVWAKFPDLADHYARYVQERIAADRELIGWYGERAVATTDLVAN PLMQDVNKGWLQYMRDNLPANILTEGEHAGEIRIGKGGDYSCLDVAINDMVEGIPYYLQKDLVALIGRDLIVRERAMLFE AVQGTPTEKAAMDSFSQKYGGLPWETPSFFPARGLVITPLANLSLYHQDTSWRRKIEDNAKKDQYEDYLSRNEGYVVETP EQLVAWEFANVKLPFEEGGQTVWK >Mature_344_residues MRKRTSERFAREVLSALAQGYSVPSVGEHFAIEPSVAQRLNDKIVEQSTFLPRINIVPVDELVGENLLGYAKEPVTSRTD TSGSGERKPKDVLGLGKYDYQLHKTDSDVAIRYNTIDVWAKFPDLADHYARYVQERIAADRELIGWYGERAVATTDLVAN PLMQDVNKGWLQYMRDNLPANILTEGEHAGEIRIGKGGDYSCLDVAINDMVEGIPYYLQKDLVALIGRDLIVRERAMLFE AVQGTPTEKAAMDSFSQKYGGLPWETPSFFPARGLVITPLANLSLYHQDTSWRRKIEDNAKKDQYEDYLSRNEGYVVETP EQLVAWEFANVKLPFEEGGQTVWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38916; Mature: 38916
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRTSERFAREVLSALAQGYSVPSVGEHFAIEPSVAQRLNDKIVEQSTFLPRINIVPVD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEEEHH ELVGENLLGYAKEPVTSRTDTSGSGERKPKDVLGLGKYDYQLHKTDSDVAIRYNTIDVWA HHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCEEEEEEEEEEHH KFPDLADHYARYVQERIAADRELIGWYGERAVATTDLVANPLMQDVNKGWLQYMRDNLPA CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NILTEGEHAGEIRIGKGGDYSCLDVAINDMVEGIPYYLQKDLVALIGRDLIVRERAMLFE EEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQGTPTEKAAMDSFSQKYGGLPWETPSFFPARGLVITPLANLSLYHQDTSWRRKIEDNA HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHCCC KKDQYEDYLSRNEGYVVETPEQLVAWEFANVKLPFEEGGQTVWK CHHHHHHHHHCCCCEEEECHHHHHHHHHCCEECCHHHCCCCCCC >Mature Secondary Structure MRKRTSERFAREVLSALAQGYSVPSVGEHFAIEPSVAQRLNDKIVEQSTFLPRINIVPVD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEEEHH ELVGENLLGYAKEPVTSRTDTSGSGERKPKDVLGLGKYDYQLHKTDSDVAIRYNTIDVWA HHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCEEEEEEEEEEHH KFPDLADHYARYVQERIAADRELIGWYGERAVATTDLVANPLMQDVNKGWLQYMRDNLPA CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NILTEGEHAGEIRIGKGGDYSCLDVAINDMVEGIPYYLQKDLVALIGRDLIVRERAMLFE EEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQGTPTEKAAMDSFSQKYGGLPWETPSFFPARGLVITPLANLSLYHQDTSWRRKIEDNA HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHCCC KKDQYEDYLSRNEGYVVETPEQLVAWEFANVKLPFEEGGQTVWK CHHHHHHHHHCCCCEEEECHHHHHHHHHCCEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA