| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903488
Identifier: 220903488
GI number: 220903488
Start: 255653
End: 256000
Strand: Reverse
Name: 220903488
Synonym: Ddes_0206
Alternate gene names: NA
Gene position: 256000-255653 (Counterclockwise)
Preceding gene: 220903489
Following gene: 220903487
Centisome position: 8.91
GC content: 52.3
Gene sequence:
>348_bases ATGATCTATCGCGCCGATGCACTGGAAGGGTTTGAAAAGGAAATGTTCGGTGGCCCCGGAACCACCAAGTTCACCAAAAT CGTTAATGAAGAAGGGCTGGCCGGAAAAGGCCGTCTGTTCAATCTGGTGAATCTCAAGCCCGGCTGCGCCATCGGCAGCC ACAAGCACAGCGGAGAGCTTGAAATTTATCACGTGCTCAAAGGGCAGGGAACCTATAATGACAACGGCACAGAAGTGCTT GTCAAAGCCGGTGATGTGACCGTCTGTAATGACGGCGAAGTCCACGGCATTCTCAATACCGGCACGGAAGATCTGGAGAT GGTCGCCCTTATCCTGTTCACCAGATAA
Upstream 100 bases:
>100_bases TAGGCCTTGGGCAGCTGCCCGCGCCTGACAGCGGACGCATAGCCGCAAGCGCGCGGGGCAGCGCACAGGCCGCAACCAAA CAAAGGCACAAGGAGAACAC
Downstream 100 bases:
>100_bases GGCGCTGTACGGTTACCATAGCCAACGCCCTGCCCCTGCCGACGATACCGCGCAGGCGTGCACAAGCCGCCGCAAGACCG GCGGCCGAGACGGCAAAGGC
Product: Cupin 2 barrel domain-containing protein
Products: NA
Alternate protein names: Mannose-6-Phosphate Isomerase; Cupin 2 Domain-Containing Protein; Cupin 2 Barrel
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MIYRADALEGFEKEMFGGPGTTKFTKIVNEEGLAGKGRLFNLVNLKPGCAIGSHKHSGELEIYHVLKGQGTYNDNGTEVL VKAGDVTVCNDGEVHGILNTGTEDLEMVALILFTR
Sequences:
>Translated_115_residues MIYRADALEGFEKEMFGGPGTTKFTKIVNEEGLAGKGRLFNLVNLKPGCAIGSHKHSGELEIYHVLKGQGTYNDNGTEVL VKAGDVTVCNDGEVHGILNTGTEDLEMVALILFTR >Mature_115_residues MIYRADALEGFEKEMFGGPGTTKFTKIVNEEGLAGKGRLFNLVNLKPGCAIGSHKHSGELEIYHVLKGQGTYNDNGTEVL VKAGDVTVCNDGEVHGILNTGTEDLEMVALILFTR
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12412; Mature: 12412
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYRADALEGFEKEMFGGPGTTKFTKIVNEEGLAGKGRLFNLVNLKPGCAIGSHKHSGEL CEEECCHHCCHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE EIYHVLKGQGTYNDNGTEVLVKAGDVTVCNDGEVHGILNTGTEDLEMVALILFTR EEEEEEECCCCCCCCCCEEEEEECCEEEECCCCEEEEEECCCCHHHEEEEEEECC >Mature Secondary Structure MIYRADALEGFEKEMFGGPGTTKFTKIVNEEGLAGKGRLFNLVNLKPGCAIGSHKHSGEL CEEECCHHCCHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE EIYHVLKGQGTYNDNGTEVLVKAGDVTVCNDGEVHGILNTGTEDLEMVALILFTR EEEEEEECCCCCCCCCCEEEEEECCEEEECCCCEEEEEECCCCHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA